RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 BRPF1P55201 1214 aaPredicted RBP19.62■□□□□ 0.73
CCDC90B-215ENST00000529745 MAPK8IP2Q13387 824 aaPredicted RBP19.62■□□□□ 0.73
CCDC90B-215ENST00000529745 GREM2Q9H772 168 aa19.62■□□□□ 0.73
CCDC90B-215ENST00000529745 BSDC1Q9NW68 430 aaPredicted RBP19.62■□□□□ 0.73
CCDC90B-215ENST00000529745 POLLQ9UGP5 575 aa19.62■□□□□ 0.73
CCDC90B-215ENST00000529745 HACL1Q9UJ83 578 aa19.62■□□□□ 0.73
CCDC90B-215ENST00000529745 CTCFP49711 727 aaPredicted RBP19.61■□□□□ 0.73
CCDC90B-215ENST00000529745 TBC1D16Q8TBP0 767 aa19.61■□□□□ 0.73
CCDC90B-215ENST00000529745 EYA3Q99504 573 aa19.61■□□□□ 0.73
CCDC90B-215ENST00000529745 SRCIN1Q9C0H9 1055 aa19.61■□□□□ 0.73
CCDC90B-215ENST00000529745 UTYO14607 1347 aa19.6■□□□□ 0.73
CCDC90B-215ENST00000529745 XDHP47989 1333 aa19.6■□□□□ 0.73
CCDC90B-215ENST00000529745 GRM8O00222 908 aa19.6■□□□□ 0.73
CCDC90B-215ENST00000529745 CXCL9Q07325 125 aa19.6■□□□□ 0.73
CCDC90B-215ENST00000529745 WASHC4Q2M389 1173 aa19.6■□□□□ 0.73
CCDC90B-215ENST00000529745 CCDC85AQ96PX6 553 aaPredicted RBP19.6■□□□□ 0.73
CCDC90B-215ENST00000529745 SCN9AQ15858 1988 aa19.6■□□□□ 0.73
CCDC90B-215ENST00000529745 EPHX2P34913 555 aa19.59■□□□□ 0.73
CCDC90B-215ENST00000529745 SCNN1DP51172 638 aa19.59■□□□□ 0.73
CCDC90B-215ENST00000529745 FOXO4P98177 505 aa19.59■□□□□ 0.73
CCDC90B-215ENST00000529745 PNMA8AQ86V59 439 aaPredicted RBP19.59■□□□□ 0.73
CCDC90B-215ENST00000529745 LDHDQ86WU2 507 aa19.59■□□□□ 0.73
CCDC90B-215ENST00000529745 ABHD8Q96I13 439 aa19.59■□□□□ 0.73
CCDC90B-215ENST00000529745 ZNF646O15015 1829 aaPredicted RBP19.59■□□□□ 0.73
CCDC90B-215ENST00000529745 YDJCA8MPS7 323 aa19.58■□□□□ 0.72
CCDC90B-215ENST00000529745 C6orf229H3BNL8 230 aa19.58■□□□□ 0.72
CCDC90B-215ENST00000529745 ITGA6P23229 1130 aa19.58■□□□□ 0.72
CCDC90B-215ENST00000529745 CHADLQ6NUI6 762 aa19.58■□□□□ 0.72
CCDC90B-215ENST00000529745 GGA1Q9UJY5 639 aa19.58■□□□□ 0.72
CCDC90B-215ENST00000529745 ATP2B4P23634 1241 aa19.57■□□□□ 0.72
CCDC90B-215ENST00000529745 MLLT1Q03111 559 aaPredicted RBP19.57■□□□□ 0.72
CCDC90B-215ENST00000529745 CIAPIN1Q6FI81 312 aa19.57■□□□□ 0.72
CCDC90B-215ENST00000529745 AIDAQ96BJ3 306 aa19.57■□□□□ 0.72
CCDC90B-215ENST00000529745 MINPP1Q9UNW1 487 aa19.57■□□□□ 0.72
CCDC90B-215ENST00000529745 GJA3Q9Y6H8 435 aa19.57■□□□□ 0.72
CCDC90B-215ENST00000529745 ZNF609O15014 1411 aa19.57■□□□□ 0.72
CCDC90B-215ENST00000529745 CNTNAP1P78357 1384 aa19.57■□□□□ 0.72
CCDC90B-215ENST00000529745 POTEIP0CG38 1075 aa19.56■□□□□ 0.72
CCDC90B-215ENST00000529745 POTEJP0CG39 1038 aa19.56■□□□□ 0.72
CCDC90B-215ENST00000529745 IGHMBP2P38935 993 aaKnown RBP19.56■□□□□ 0.72
CCDC90B-215ENST00000529745 TNIP1Q15025 636 aa19.56■□□□□ 0.72
CCDC90B-215ENST00000529745 SLC4A10Q6U841 1118 aa19.56■□□□□ 0.72
CCDC90B-215ENST00000529745 C9orf78Q9NZ63 289 aaPredicted RBP19.56■□□□□ 0.72
CCDC90B-215ENST00000529745 ANKIB1Q9P2G1 1089 aa19.56■□□□□ 0.72
CCDC90B-215ENST00000529745 UFL1O94874 794 aa19.55■□□□□ 0.72
CCDC90B-215ENST00000529745 LMOD1P29536 600 aaPredicted RBP19.55■□□□□ 0.72
CCDC90B-215ENST00000529745 LBX1P52954 281 aa19.55■□□□□ 0.72
CCDC90B-215ENST00000529745 ZC3H12CQ9C0D7 883 aaKnown RBP19.55■□□□□ 0.72
CCDC90B-215ENST00000529745 SMC4Q9NTJ3 1288 aa19.55■□□□□ 0.72
CCDC90B-215ENST00000529745 GPRC5DQ9NZD1 345 aa19.55■□□□□ 0.72
CCDC90B-215ENST00000529745 MED23Q9ULK4 1368 aa19.55■□□□□ 0.72
CCDC90B-215ENST00000529745 ANKRD18BA2A2Z9 1011 aa19.54■□□□□ 0.72
CCDC90B-215ENST00000529745 RGS19P49795 217 aa19.54■□□□□ 0.72
CCDC90B-215ENST00000529745 RIMBP2O15034 1052 aa19.53■□□□□ 0.72
CCDC90B-215ENST00000529745 ECE2O60344 883 aa19.53■□□□□ 0.72
CCDC90B-215ENST00000529745 RARSP54136 660 aaKnown RBP19.53■□□□□ 0.72
CCDC90B-215ENST00000529745 EPHA10Q5JZY3 1008 aa19.53■□□□□ 0.72
CCDC90B-215ENST00000529745 USP50Q70EL3 339 aaPredicted RBP19.53■□□□□ 0.72
CCDC90B-215ENST00000529745 DPF2Q92785 391 aa19.53■□□□□ 0.72
CCDC90B-215ENST00000529745 KAZALD1Q96I82 304 aa19.53■□□□□ 0.72
CCDC90B-215ENST00000529745 BCL2L13Q9BXK5 485 aa19.53■□□□□ 0.72
CCDC90B-215ENST00000529745 DBNDD1Q9H9R9 158 aa19.53■□□□□ 0.72
CCDC90B-215ENST00000529745 LEMD3Q9Y2U8 911 aa19.53■□□□□ 0.72
CCDC90B-215ENST00000529745 PASKQ96RG2 1323 aa19.52■□□□□ 0.72
CCDC90B-215ENST00000529745 RAD17O75943 681 aa19.52■□□□□ 0.72
CCDC90B-215ENST00000529745 EPS15P42566 896 aa19.52■□□□□ 0.72
CCDC90B-215ENST00000529745 CCT4P50991 539 aaKnown RBP19.52■□□□□ 0.72
CCDC90B-215ENST00000529745 IFIT5Q13325 482 aaKnown RBP19.52■□□□□ 0.72
CCDC90B-215ENST00000529745 RABL6Q3YEC7 729 aaPredicted RBP19.52■□□□□ 0.72
CCDC90B-215ENST00000529745 LMBR1LQ6UX01 489 aa19.52■□□□□ 0.72
CCDC90B-215ENST00000529745 MPHOSPH8Q99549 860 aa19.52■□□□□ 0.72
CCDC90B-215ENST00000529745 ANKRD2Q9GZV1 360 aa19.52■□□□□ 0.72
CCDC90B-215ENST00000529745 ADARB2Q9NS39 739 aaKnown RBP19.52■□□□□ 0.72
CCDC90B-215ENST00000529745 WBP1LQ9NX94 342 aa19.52■□□□□ 0.72
CCDC90B-215ENST00000529745 TNRC18O15417 2968 aaPredicted RBP19.52■□□□□ 0.71
CCDC90B-215ENST00000529745 TRPM7Q96QT4 1865 aa19.52■□□□□ 0.71
CCDC90B-215ENST00000529745 NBPF7P0C2Y1 421 aaPredicted RBP19.51■□□□□ 0.71
CCDC90B-215ENST00000529745 RPS12P25398 132 aaKnown RBP19.51■□□□□ 0.71
CCDC90B-215ENST00000529745 GMPSP49915 693 aaPredicted RBP19.51■□□□□ 0.71
CCDC90B-215ENST00000529745 SUCLG2Q96I99 432 aa19.51■□□□□ 0.71
CCDC90B-215ENST00000529745 GPR101Q96P66 508 aaPredicted RBP19.51■□□□□ 0.71
CCDC90B-215ENST00000529745 ITGBL1O95965 494 aaPredicted RBP19.5■□□□□ 0.71
CCDC90B-215ENST00000529745 VEGFBP49765 207 aa19.5■□□□□ 0.71
CCDC90B-215ENST00000529745 HNRNPUQ00839 825 aaKnown RBP eCLIP19.5■□□□□ 0.71
CCDC90B-215ENST00000529745 EAPPQ56P03 285 aaPredicted RBP19.5■□□□□ 0.71
CCDC90B-215ENST00000529745 PODNQ7Z5L7 613 aa19.5■□□□□ 0.71
CCDC90B-215ENST00000529745 ARHGAP45Q92619 1136 aa19.5■□□□□ 0.71
CCDC90B-215ENST00000529745 KIF16BQ96L93 1317 aa19.5■□□□□ 0.71
CCDC90B-215ENST00000529745 PSMD14O00487 310 aa19.49■□□□□ 0.71
CCDC90B-215ENST00000529745 VIL1P09327 827 aaKnown RBP19.49■□□□□ 0.71
CCDC90B-215ENST00000529745 DOK7Q18PE1 504 aa19.49■□□□□ 0.71
CCDC90B-215ENST00000529745 CCDC57Q2TAC2 916 aa19.49■□□□□ 0.71
CCDC90B-215ENST00000529745 API5Q9BZZ5 524 aaKnown RBP19.49■□□□□ 0.71
CCDC90B-215ENST00000529745 USP44Q9H0E7 712 aa19.49■□□□□ 0.71
CCDC90B-215ENST00000529745 ZBED9Q6R2W3 1325 aa19.49■□□□□ 0.71
CCDC90B-215ENST00000529745 HSPA8P11142 646 aaKnown RBP19.48■□□□□ 0.71
CCDC90B-215ENST00000529745 CHRNDQ07001 517 aa19.48■□□□□ 0.71
CCDC90B-215ENST00000529745 C15orf52Q6ZUT6 534 aaKnown RBP19.48■□□□□ 0.71
CCDC90B-215ENST00000529745 PGAP2Q9UHJ9 254 aa19.48■□□□□ 0.71
CCDC90B-215ENST00000529745 NOB1Q9ULX3 412 aaKnown RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms