RNA–Protein interactions for RNA: ENST00000529563.5

USH1C-208, Transcript of USH1 protein network component harmonin, humanhuman

TSL 2

Gene USH1C, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-208ENST00000529563 RPS12P25398 132 aaKnown RBP15.65■□□□□ 0.1
USH1C-208ENST00000529563 MAP2K2P36507 400 aa15.65■□□□□ 0.1
USH1C-208ENST00000529563 HIRAP54198 1017 aaPredicted RBP15.65■□□□□ 0.1
USH1C-208ENST00000529563 CCDC30Q5VVM6 783 aa15.65■□□□□ 0.1
USH1C-208ENST00000529563 SAMD7Q7Z3H4 446 aa15.65■□□□□ 0.1
USH1C-208ENST00000529563 DPF2Q92785 391 aa15.65■□□□□ 0.1
USH1C-208ENST00000529563 CCDC85AQ96PX6 553 aaPredicted RBP15.65■□□□□ 0.1
USH1C-208ENST00000529563 CWC25Q9NXE8 425 aaPredicted RBP15.65■□□□□ 0.1
USH1C-208ENST00000529563 TSKSQ9UJT2 592 aa15.65■□□□□ 0.1
USH1C-208ENST00000529563 GGA1Q9UJY5 639 aa15.65■□□□□ 0.1
USH1C-208ENST00000529563 KRT26Q7Z3Y9 468 aa15.64■□□□□ 0.09
USH1C-208ENST00000529563 TBC1D16Q8TBP0 767 aa15.64■□□□□ 0.09
USH1C-208ENST00000529563 PGAP2Q9UHJ9 254 aa15.64■□□□□ 0.09
USH1C-208ENST00000529563 LRRC37AA6NMS7 1700 aa15.63■□□□□ 0.09
USH1C-208ENST00000529563 DUOX1Q9NRD9 1551 aa15.63■□□□□ 0.09
USH1C-208ENST00000529563 CA12O43570 354 aa15.63■□□□□ 0.09
USH1C-208ENST00000529563 HUNKP57058 714 aa15.63■□□□□ 0.09
USH1C-208ENST00000529563 CCDC191Q8NCU4 936 aa15.63■□□□□ 0.09
USH1C-208ENST00000529563 JARID2Q92833 1246 aaPredicted RBP15.63■□□□□ 0.09
USH1C-208ENST00000529563 ABHD8Q96I13 439 aa15.63■□□□□ 0.09
USH1C-208ENST00000529563 STK31Q9BXU1 1019 aa15.63■□□□□ 0.09
USH1C-208ENST00000529563 SEC31BQ9NQW1 1179 aa15.63■□□□□ 0.09
USH1C-208ENST00000529563 PDE8AO60658 829 aa15.62■□□□□ 0.09
USH1C-208ENST00000529563 PCCAP05165 728 aaPredicted RBP15.62■□□□□ 0.09
USH1C-208ENST00000529563 ZNF853P0CG23 659 aa15.62■□□□□ 0.09
USH1C-208ENST00000529563 NEXNQ0ZGT2 675 aa15.62■□□□□ 0.09
USH1C-208ENST00000529563 ANKRD18AQ8IVF6 992 aa15.62■□□□□ 0.09
USH1C-208ENST00000529563 C2orf69Q8N8R5 385 aa15.62■□□□□ 0.09
USH1C-208ENST00000529563 HHIPL1Q96JK4 782 aa15.62■□□□□ 0.09
USH1C-208ENST00000529563 CCDC85CA6NKD9 419 aa15.61■□□□□ 0.09
USH1C-208ENST00000529563 KIF4BQ2VIQ3 1234 aa15.61■□□□□ 0.09
USH1C-208ENST00000529563 SULF1Q8IWU6 871 aa15.61■□□□□ 0.09
USH1C-208ENST00000529563 C8orf58Q8NAV2 365 aa15.61■□□□□ 0.09
USH1C-208ENST00000529563 METTL22Q9BUU2 404 aaPredicted RBP15.61■□□□□ 0.09
USH1C-208ENST00000529563 MAP3K2Q9Y2U5 619 aa15.61■□□□□ 0.09
USH1C-208ENST00000529563 BRPF1P55201 1214 aaPredicted RBP15.6■□□□□ 0.09
USH1C-208ENST00000529563 NOGQ13253 232 aa15.6■□□□□ 0.09
USH1C-208ENST00000529563 CDC5LQ99459 802 aaKnown RBP15.6■□□□□ 0.09
USH1C-208ENST00000529563 GBA2Q9HCG7 927 aaPredicted RBP15.6■□□□□ 0.09
USH1C-208ENST00000529563 KCNQ5Q9NR82 932 aa15.6■□□□□ 0.09
USH1C-208ENST00000529563 THSD7BQ9C0I4 1608 aa15.6■□□□□ 0.09
USH1C-208ENST00000529563 ADM5C9JUS6 153 aa15.59■□□□□ 0.09
USH1C-208ENST00000529563 FBXW7Q969H0 707 aa15.59■□□□□ 0.09
USH1C-208ENST00000529563 GGA3Q9NZ52 723 aa15.59■□□□□ 0.09
USH1C-208ENST00000529563 PODXL2Q9NZ53 605 aa15.59■□□□□ 0.09
USH1C-208ENST00000529563 XDHP47989 1333 aa15.59■□□□□ 0.09
USH1C-208ENST00000529563 RTL9Q8NET4 1388 aa15.59■□□□□ 0.09
USH1C-208ENST00000529563 DLK2Q6UY11 383 aa15.58■□□□□ 0.08
USH1C-208ENST00000529563 EGFRP00533 1210 aa15.57■□□□□ 0.08
USH1C-208ENST00000529563 VIL1P09327 827 aaKnown RBP15.57■□□□□ 0.08
USH1C-208ENST00000529563 ATP2B4P23634 1241 aa15.57■□□□□ 0.08
USH1C-208ENST00000529563 ZNF157P51786 506 aaPredicted RBP15.57■□□□□ 0.08
USH1C-208ENST00000529563 CTSWP56202 376 aa15.57■□□□□ 0.08
USH1C-208ENST00000529563 RGMBQ6NW40 437 aa15.57■□□□□ 0.08
USH1C-208ENST00000529563 RSBN1LQ6PCB5 846 aaPredicted RBP15.57■□□□□ 0.08
USH1C-208ENST00000529563 KSR2Q6VAB6 950 aa15.57■□□□□ 0.08
USH1C-208ENST00000529563 TSR2Q969E8 191 aaKnown RBP15.57■□□□□ 0.08
USH1C-208ENST00000529563 CCDC102AQ96A19 550 aa15.57■□□□□ 0.08
USH1C-208ENST00000529563 PI4KAP2A4QPH2 592 aa15.56■□□□□ 0.08
USH1C-208ENST00000529563 DIEXFQ68CQ4 756 aaKnown RBP15.56■□□□□ 0.08
USH1C-208ENST00000529563 TSPYL6Q8N831 410 aa15.56■□□□□ 0.08
USH1C-208ENST00000529563 PI4KAP1Q8N8J0 262 aa15.56■□□□□ 0.08
USH1C-208ENST00000529563 AGBL3Q8NEM8 1001 aa15.56■□□□□ 0.08
USH1C-208ENST00000529563 MRS2Q9HD23 443 aa15.56■□□□□ 0.08
USH1C-208ENST00000529563 COL4A1P02462 1669 aa15.55■□□□□ 0.08
USH1C-208ENST00000529563 USP17L3A6NCW0 530 aa15.55■□□□□ 0.08
USH1C-208ENST00000529563 USP17L4A6NCW7 530 aa15.55■□□□□ 0.08
USH1C-208ENST00000529563 USP17L8P0C7I0 530 aa15.55■□□□□ 0.08
USH1C-208ENST00000529563 IGHMBP2P38935 993 aaKnown RBP15.55■□□□□ 0.08
USH1C-208ENST00000529563 SCARF1Q14162 830 aa15.55■□□□□ 0.08
USH1C-208ENST00000529563 ANGEL2Q5VTE6 544 aaKnown RBP15.55■□□□□ 0.08
USH1C-208ENST00000529563 USP17L1Q7RTZ2 530 aa15.55■□□□□ 0.08
USH1C-208ENST00000529563 DGKZQ13574 1117 aa15.54■□□□□ 0.08
USH1C-208ENST00000529563 TWISTNBQ3B726 338 aaPredicted RBP15.54■□□□□ 0.08
USH1C-208ENST00000529563 PODNQ7Z5L7 613 aa15.54■□□□□ 0.08
USH1C-208ENST00000529563 SLC4A2P04920 1241 aa15.53■□□□□ 0.08
USH1C-208ENST00000529563 CWF19L2Q2TBE0 894 aaKnown RBP15.53■□□□□ 0.08
USH1C-208ENST00000529563 FAM161AQ3B820 660 aa15.53■□□□□ 0.08
USH1C-208ENST00000529563 UBE3BQ7Z3V4 1068 aa15.53■□□□□ 0.08
USH1C-208ENST00000529563 OGFOD1Q8N543 542 aa15.53■□□□□ 0.08
USH1C-208ENST00000529563 CDCA5Q96FF9 252 aa15.53■□□□□ 0.08
USH1C-208ENST00000529563 MYOZ2Q9NPC6 264 aa15.53■□□□□ 0.08
USH1C-208ENST00000529563 BSDC1Q9NW68 430 aaPredicted RBP15.53■□□□□ 0.08
USH1C-208ENST00000529563 ASTN2O75129 1339 aaPredicted RBP15.52■□□□□ 0.08
USH1C-208ENST00000529563 IGKV5-2P06315 115 aa15.52■□□□□ 0.08
USH1C-208ENST00000529563 KCNJ4P48050 445 aa15.52■□□□□ 0.08
USH1C-208ENST00000529563 ZNF280AP59817 542 aaPredicted RBP15.52■□□□□ 0.08
USH1C-208ENST00000529563 KIF23Q02241 960 aaPredicted RBP15.52■□□□□ 0.08
USH1C-208ENST00000529563 TTLL12Q14166 644 aaPredicted RBP15.52■□□□□ 0.08
USH1C-208ENST00000529563 TTLL11Q8NHH1 800 aa15.52■□□□□ 0.08
USH1C-208ENST00000529563 ZIC5Q96T25 663 aa15.52■□□□□ 0.08
USH1C-208ENST00000529563 MPHOSPH8Q99549 860 aa15.52■□□□□ 0.08
USH1C-208ENST00000529563 MCOLN1Q9GZU1 580 aa15.52■□□□□ 0.08
USH1C-208ENST00000529563 MYH16Q9H6N6 1097 aa15.52■□□□□ 0.08
USH1C-208ENST00000529563 GREM2Q9H772 168 aa15.52■□□□□ 0.08
USH1C-208ENST00000529563 NEURL1BA8MQ27 555 aa15.51■□□□□ 0.07
USH1C-208ENST00000529563 CCT4P50991 539 aaKnown RBP15.51■□□□□ 0.07
USH1C-208ENST00000529563 FKBP5Q13451 457 aaPredicted RBP15.51■□□□□ 0.07
USH1C-208ENST00000529563 MINPP1Q9UNW1 487 aa15.51■□□□□ 0.07
USH1C-208ENST00000529563 POLR2AP24928 1970 aaKnown RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms