RNA–Protein interactions for RNA: ENST00000529552.5

FGFR1-233, Transcript of fibroblast growth factor receptor 1, human

TSL 4

Gene FGFR1, Length 688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-233	ENST00000529552	DBF4	Q9UBU7	674 aa	Predicted RBP	11.89	□□□□□ -0.51
FGFR1-233	ENST00000529552	DUOX1	Q9NRD9	1551 aa		11.88	□□□□□ -0.51
FGFR1-233	ENST00000529552		H7C1D1	291 aa		11.88	□□□□□ -0.51
FGFR1-233	ENST00000529552	MAP2K2	P36507	400 aa		11.88	□□□□□ -0.51
FGFR1-233	ENST00000529552	CST9	Q5W186	159 aa		11.88	□□□□□ -0.51
FGFR1-233	ENST00000529552	ANKRD13D	Q6ZTN6	518 aa		11.88	□□□□□ -0.51
FGFR1-233	ENST00000529552	PHF12	Q96QT6	1004 aa		11.88	□□□□□ -0.51
FGFR1-233	ENST00000529552	ZNF408	Q9H9D4	720 aa		11.88	□□□□□ -0.51
FGFR1-233	ENST00000529552	HYPK	Q9NX55	129 aa		11.88	□□□□□ -0.51
FGFR1-233	ENST00000529552	CA12	O43570	354 aa		11.87	□□□□□ -0.51
FGFR1-233	ENST00000529552	HSP90B1	P14625	803 aa	Known RBP	11.87	□□□□□ -0.51
FGFR1-233	ENST00000529552	KRT24	Q2M2I5	525 aa		11.87	□□□□□ -0.51
FGFR1-233	ENST00000529552	WASHC4	Q2M389	1173 aa		11.87	□□□□□ -0.51
FGFR1-233	ENST00000529552	CDC37L1	Q7L3B6	337 aa		11.87	□□□□□ -0.51
FGFR1-233	ENST00000529552	HHIPL1	Q96JK4	782 aa		11.87	□□□□□ -0.51
FGFR1-233	ENST00000529552	EYA3	Q99504	573 aa		11.87	□□□□□ -0.51
FGFR1-233	ENST00000529552	GLIS2	Q9BZE0	524 aa	Predicted RBP	11.87	□□□□□ -0.51
FGFR1-233	ENST00000529552	CNOT7	Q9UIV1	285 aa	Known RBP	11.87	□□□□□ -0.51
FGFR1-233	ENST00000529552	PCDHB13	Q9Y5F0	798 aa		11.87	□□□□□ -0.51
FGFR1-233	ENST00000529552	C6orf229	H3BNL8	230 aa		11.86	□□□□□ -0.51
FGFR1-233	ENST00000529552	MAP3K13	O43283	966 aa		11.86	□□□□□ -0.51
FGFR1-233	ENST00000529552	GOLGA2	Q08379	1002 aa		11.86	□□□□□ -0.51
FGFR1-233	ENST00000529552	SAPCD2	Q86UD0	394 aa		11.86	□□□□□ -0.51
FGFR1-233	ENST00000529552	MICALL2	Q8IY33	904 aa		11.86	□□□□□ -0.51
FGFR1-233	ENST00000529552	ZNF428	Q96B54	188 aa		11.86	□□□□□ -0.51
FGFR1-233	ENST00000529552	ABHD8	Q96I13	439 aa		11.86	□□□□□ -0.51
FGFR1-233	ENST00000529552	PGAP2	Q9UHJ9	254 aa		11.86	□□□□□ -0.51
FGFR1-233	ENST00000529552	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.86	□□□□□ -0.51
FGFR1-233	ENST00000529552	ATP5J2-PTCD1	G3V325	749 aa		11.85	□□□□□ -0.51
FGFR1-233	ENST00000529552	DDX10	Q13206	875 aa	Known RBP	11.85	□□□□□ -0.51
FGFR1-233	ENST00000529552	SF3B3	Q15393	1217 aa	Known RBP	11.85	□□□□□ -0.51
FGFR1-233	ENST00000529552	TRPM4	Q8TD43	1214 aa		11.85	□□□□□ -0.51
FGFR1-233	ENST00000529552	FAM89A	Q96GI7	184 aa		11.85	□□□□□ -0.51
FGFR1-233	ENST00000529552	CFAP44	Q96MT7	982 aa		11.85	□□□□□ -0.51
FGFR1-233	ENST00000529552	ISCA1	Q9BUE6	129 aa		11.85	□□□□□ -0.51
FGFR1-233	ENST00000529552	TRIM35	Q9UPQ4	493 aa		11.85	□□□□□ -0.51
FGFR1-233	ENST00000529552	POLR2A	P24928	1970 aa	Known RBP	11.85	□□□□□ -0.51
FGFR1-233	ENST00000529552	YDJC	A8MPS7	323 aa		11.84	□□□□□ -0.51
FGFR1-233	ENST00000529552		G3V3G9	751 aa		11.84	□□□□□ -0.51
FGFR1-233	ENST00000529552	IRS4	O14654	1257 aa	Predicted RBP	11.84	□□□□□ -0.51
FGFR1-233	ENST00000529552	RIMBP2	O15034	1052 aa		11.84	□□□□□ -0.51
FGFR1-233	ENST00000529552	AOC2	O75106	756 aa		11.84	□□□□□ -0.51
FGFR1-233	ENST00000529552	RPS12	P25398	132 aa	Known RBP	11.84	□□□□□ -0.51
FGFR1-233	ENST00000529552	BRPF1	P55201	1214 aa	Predicted RBP	11.84	□□□□□ -0.51
FGFR1-233	ENST00000529552	EVX2	Q03828	476 aa		11.84	□□□□□ -0.51
FGFR1-233	ENST00000529552	CALD1	Q05682	793 aa	Known RBP	11.84	□□□□□ -0.51
FGFR1-233	ENST00000529552	RTL5	Q5HYW3	569 aa	Predicted RBP	11.84	□□□□□ -0.51
FGFR1-233	ENST00000529552	DUSP27	Q5VZP5	1158 aa		11.84	□□□□□ -0.51
FGFR1-233	ENST00000529552	RIC3	Q7Z5B4	369 aa		11.84	□□□□□ -0.51
FGFR1-233	ENST00000529552	DPF2	Q92785	391 aa		11.84	□□□□□ -0.51
FGFR1-233	ENST00000529552	CELF1	Q92879	486 aa	Known RBP	11.84	□□□□□ -0.51
FGFR1-233	ENST00000529552	RNF25	Q96BH1	459 aa	Predicted RBP	11.84	□□□□□ -0.51
FGFR1-233	ENST00000529552	DBNDD1	Q9H9R9	158 aa		11.84	□□□□□ -0.51
FGFR1-233	ENST00000529552	CASP8AP2	Q9UKL3	1982 aa		11.83	□□□□□ -0.52
FGFR1-233	ENST00000529552	PSMD14	O00487	310 aa		11.83	□□□□□ -0.52
FGFR1-233	ENST00000529552	ECE2	O60344	883 aa		11.83	□□□□□ -0.52
FGFR1-233	ENST00000529552	HIRA	P54198	1017 aa	Predicted RBP	11.83	□□□□□ -0.52
FGFR1-233	ENST00000529552	NOG	Q13253	232 aa		11.83	□□□□□ -0.52
FGFR1-233	ENST00000529552	DCPS	Q96C86	337 aa	Known RBP	11.83	□□□□□ -0.52
FGFR1-233	ENST00000529552	CHMP4A	Q9BY43	222 aa		11.83	□□□□□ -0.52
FGFR1-233	ENST00000529552	PSME4	Q14997	1843 aa		11.82	□□□□□ -0.52
FGFR1-233	ENST00000529552	HUNK	P57058	714 aa		11.82	□□□□□ -0.52
FGFR1-233	ENST00000529552	RPS8	P62241	208 aa	Known RBP	11.82	□□□□□ -0.52
FGFR1-233	ENST00000529552	GPSM2	P81274	684 aa		11.82	□□□□□ -0.52
FGFR1-233	ENST00000529552	TRIM28	Q13263	835 aa	Known RBP	11.82	□□□□□ -0.52
FGFR1-233	ENST00000529552	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	11.82	□□□□□ -0.52
FGFR1-233	ENST00000529552	KRT26	Q7Z3Y9	468 aa		11.82	□□□□□ -0.52
FGFR1-233	ENST00000529552	USP48	Q86UV5	1035 aa		11.82	□□□□□ -0.52
FGFR1-233	ENST00000529552	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	11.82	□□□□□ -0.52
FGFR1-233	ENST00000529552	ZC3H12C	Q9C0D7	883 aa	Known RBP	11.82	□□□□□ -0.52
FGFR1-233	ENST00000529552	MBIP	Q9NS73	344 aa		11.82	□□□□□ -0.52
FGFR1-233	ENST00000529552	TSKS	Q9UJT2	592 aa		11.82	□□□□□ -0.52
FGFR1-233	ENST00000529552	ADAMTS8	Q9UP79	889 aa		11.82	□□□□□ -0.52
FGFR1-233	ENST00000529552	MYH3	P11055	1940 aa		11.82	□□□□□ -0.52
FGFR1-233	ENST00000529552	SCN9A	Q15858	1988 aa		11.81	□□□□□ -0.52
FGFR1-233	ENST00000529552	SHTN1	A0MZ66	631 aa		11.81	□□□□□ -0.52
FGFR1-233	ENST00000529552	CCDC85C	A6NKD9	419 aa		11.81	□□□□□ -0.52
FGFR1-233	ENST00000529552	DDX58	O95786	925 aa	Known RBP	11.81	□□□□□ -0.52
FGFR1-233	ENST00000529552	GNAI1	P63096	354 aa		11.81	□□□□□ -0.52
FGFR1-233	ENST00000529552	CCDC152	Q4G0S7	254 aa		11.81	□□□□□ -0.52
FGFR1-233	ENST00000529552	RBM26	Q5T8P6	1007 aa	Known RBP	11.81	□□□□□ -0.52
FGFR1-233	ENST00000529552	SAMD7	Q7Z3H4	446 aa		11.81	□□□□□ -0.52
FGFR1-233	ENST00000529552	C2orf69	Q8N8R5	385 aa		11.81	□□□□□ -0.52
FGFR1-233	ENST00000529552	TBC1D16	Q8TBP0	767 aa		11.81	□□□□□ -0.52
FGFR1-233	ENST00000529552	IFT57	Q9NWB7	429 aa		11.81	□□□□□ -0.52
FGFR1-233	ENST00000529552	ANKIB1	Q9P2G1	1089 aa		11.81	□□□□□ -0.52
FGFR1-233	ENST00000529552	POLL	Q9UGP5	575 aa		11.81	□□□□□ -0.52
FGFR1-233	ENST00000529552	AKAP11	Q9UKA4	1901 aa		11.81	□□□□□ -0.52
FGFR1-233	ENST00000529552	UFL1	O94874	794 aa		11.8	□□□□□ -0.52
FGFR1-233	ENST00000529552	DOK7	Q18PE1	504 aa		11.8	□□□□□ -0.52
FGFR1-233	ENST00000529552	KIF4B	Q2VIQ3	1234 aa		11.8	□□□□□ -0.52
FGFR1-233	ENST00000529552	SULF1	Q8IWU6	871 aa		11.8	□□□□□ -0.52
FGFR1-233	ENST00000529552	MYD88	Q99836	296 aa		11.8	□□□□□ -0.52
FGFR1-233	ENST00000529552	GBA2	Q9HCG7	927 aa	Predicted RBP	11.8	□□□□□ -0.52
FGFR1-233	ENST00000529552	GGA1	Q9UJY5	639 aa		11.8	□□□□□ -0.52
FGFR1-233	ENST00000529552	COL4A1	P02462	1669 aa		11.8	□□□□□ -0.52
FGFR1-233	ENST00000529552	RTL9	Q8NET4	1388 aa		11.79	□□□□□ -0.52
FGFR1-233	ENST00000529552	SPEF2	Q9C093	1822 aa		11.79	□□□□□ -0.52
FGFR1-233	ENST00000529552	PDAP1	Q13442	181 aa	Known RBP	11.79	□□□□□ -0.52
FGFR1-233	ENST00000529552	FAM161A	Q3B820	660 aa		11.79	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms