RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 IARSP41252 1262 aaKnown RBP14.35□□□□□ -0.11
USF1-208ENST00000528768 BEND3Q5T5X7 828 aa14.35□□□□□ -0.11
USF1-208ENST00000528768 PI4KAP1Q8N8J0 262 aa14.35□□□□□ -0.11
USF1-208ENST00000528768 SSH3Q8TE77 659 aa14.35□□□□□ -0.11
USF1-208ENST00000528768 CHMP5Q9NZZ3 219 aa14.35□□□□□ -0.11
USF1-208ENST00000528768 TBC1D2BQ9UPU7 963 aa14.35□□□□□ -0.11
USF1-208ENST00000528768 KLRG2A4D1S0 409 aaPredicted RBP14.34□□□□□ -0.11
USF1-208ENST00000528768 RGL2O15211 777 aa14.34□□□□□ -0.11
USF1-208ENST00000528768 KCNQ3O43525 872 aa14.34□□□□□ -0.11
USF1-208ENST00000528768 SMARCA5O60264 1052 aaPredicted RBP14.34□□□□□ -0.11
USF1-208ENST00000528768 SDSP20132 328 aa14.34□□□□□ -0.11
USF1-208ENST00000528768 ALDH1B1P30837 517 aa14.34□□□□□ -0.11
USF1-208ENST00000528768 PDE1AP54750 535 aa14.34□□□□□ -0.11
USF1-208ENST00000528768 RABEP1Q15276 862 aa14.34□□□□□ -0.11
USF1-208ENST00000528768 GRIPAP1Q4V328 841 aa14.34□□□□□ -0.11
USF1-208ENST00000528768 CLEC4GQ6UXB4 293 aa14.34□□□□□ -0.11
USF1-208ENST00000528768 CCDC24Q8N4L8 307 aa14.34□□□□□ -0.11
USF1-208ENST00000528768 IL27Q8NEV9 243 aa14.34□□□□□ -0.11
USF1-208ENST00000528768 HHIPL1Q96JK4 782 aa14.34□□□□□ -0.11
USF1-208ENST00000528768 MCOLN1Q9GZU1 580 aa14.34□□□□□ -0.11
USF1-208ENST00000528768 ZNF277Q9NRM2 450 aaPredicted RBP14.34□□□□□ -0.11
USF1-208ENST00000528768 C9orf78Q9NZ63 289 aaPredicted RBP14.34□□□□□ -0.11
USF1-208ENST00000528768 TLL2Q9Y6L7 1015 aa14.34□□□□□ -0.11
USF1-208ENST00000528768 MX1P20591 662 aa14.33□□□□□ -0.12
USF1-208ENST00000528768 EIF6P56537 245 aaKnown RBP14.33□□□□□ -0.12
USF1-208ENST00000528768 NEXNQ0ZGT2 675 aa14.33□□□□□ -0.12
USF1-208ENST00000528768 CC2D2BQ6DHV5 1058 aa14.33□□□□□ -0.12
USF1-208ENST00000528768 ZNF790Q6PG37 636 aa14.33□□□□□ -0.12
USF1-208ENST00000528768 USP50Q70EL3 339 aaPredicted RBP14.33□□□□□ -0.12
USF1-208ENST00000528768 NBPF5PQ86XG9 351 aaPredicted RBP14.33□□□□□ -0.12
USF1-208ENST00000528768 ERC1Q8IUD2 1116 aa14.33□□□□□ -0.12
USF1-208ENST00000528768 KIF1BPQ96EK5 621 aa14.33□□□□□ -0.12
USF1-208ENST00000528768 PSMD1Q99460 953 aa14.33□□□□□ -0.12
USF1-208ENST00000528768 BCL11AQ9H165 835 aa14.33□□□□□ -0.12
USF1-208ENST00000528768 SLKQ9H2G2 1235 aaPredicted RBP14.33□□□□□ -0.12
USF1-208ENST00000528768 EXOC6BQ9Y2D4 811 aa14.33□□□□□ -0.12
USF1-208ENST00000528768 ZNF652Q9Y2D9 606 aa14.33□□□□□ -0.12
USF1-208ENST00000528768 CACNA1SQ13698 1873 aa14.32□□□□□ -0.12
USF1-208ENST00000528768 ERC2O15083 957 aa14.32□□□□□ -0.12
USF1-208ENST00000528768 SURF6O75683 361 aaKnown RBP14.32□□□□□ -0.12
USF1-208ENST00000528768 CAMTA2O94983 1202 aa14.32□□□□□ -0.12
USF1-208ENST00000528768 HSP90AA1P07900 732 aaKnown RBP14.32□□□□□ -0.12
USF1-208ENST00000528768 MCCP23508 829 aa14.32□□□□□ -0.12
USF1-208ENST00000528768 POLA2Q14181 598 aa14.32□□□□□ -0.12
USF1-208ENST00000528768 CYP4F22Q6NT55 531 aa14.32□□□□□ -0.12
USF1-208ENST00000528768 TPTE2Q6XPS3 522 aa14.32□□□□□ -0.12
USF1-208ENST00000528768 LINS1Q8NG48 757 aa14.32□□□□□ -0.12
USF1-208ENST00000528768 STAP2Q9UGK3 403 aa14.32□□□□□ -0.12
USF1-208ENST00000528768 CIZ1Q9ULV3 898 aaPredicted RBP14.32□□□□□ -0.12
USF1-208ENST00000528768 ZNF330Q9Y3S2 320 aaPredicted RBP14.32□□□□□ -0.12
USF1-208ENST00000528768 PNMA6EA0A0J9YXQ4 647 aa14.31□□□□□ -0.12
USF1-208ENST00000528768 SRGAP3O43295 1099 aa14.31□□□□□ -0.12
USF1-208ENST00000528768 SNRPA1P09661 255 aaKnown RBP14.31□□□□□ -0.12
USF1-208ENST00000528768 PPP1R42Q7Z4L9 355 aa14.31□□□□□ -0.12
USF1-208ENST00000528768 SYNE4Q8N205 404 aa14.31□□□□□ -0.12
USF1-208ENST00000528768 FMNL2Q96PY5 1086 aa14.31□□□□□ -0.12
USF1-208ENST00000528768 MAP3K2Q9Y2U5 619 aa14.31□□□□□ -0.12
USF1-208ENST00000528768 TNRC18O15417 2968 aaPredicted RBP14.31□□□□□ -0.12
USF1-208ENST00000528768 GRM1Q13255 1194 aa14.3□□□□□ -0.12
USF1-208ENST00000528768 OS9Q13438 667 aaPredicted RBP14.3□□□□□ -0.12
USF1-208ENST00000528768 MTX1Q13505 466 aa14.3□□□□□ -0.12
USF1-208ENST00000528768 DGKZQ13574 1117 aa14.3□□□□□ -0.12
USF1-208ENST00000528768 DZIP3Q86Y13 1208 aaKnown RBP14.3□□□□□ -0.12
USF1-208ENST00000528768 GPATCH3Q96I76 525 aa14.3□□□□□ -0.12
USF1-208ENST00000528768 ZNF496Q96IT1 587 aaPredicted RBP14.3□□□□□ -0.12
USF1-208ENST00000528768 ANTXR1Q9H6X2 564 aa14.3□□□□□ -0.12
USF1-208ENST00000528768 SIPA1L3O60292 1781 aaPredicted RBP14.29□□□□□ -0.12
USF1-208ENST00000528768 TRPM7Q96QT4 1865 aa14.29□□□□□ -0.12
USF1-208ENST00000528768 EPB41L2O43491 1005 aaKnown RBP14.29□□□□□ -0.12
USF1-208ENST00000528768 PTMSP20962 102 aa14.29□□□□□ -0.12
USF1-208ENST00000528768 CST9Q5W186 159 aa14.29□□□□□ -0.12
USF1-208ENST00000528768 RIC3Q7Z5B4 369 aa14.29□□□□□ -0.12
USF1-208ENST00000528768 OTUD7AQ8TE49 926 aaPredicted RBP14.29□□□□□ -0.12
USF1-208ENST00000528768 USP26Q9BXU7 913 aa14.29□□□□□ -0.12
USF1-208ENST00000528768 LTBP1Q14766 1721 aa14.29□□□□□ -0.12
USF1-208ENST00000528768 TRIM6-TRIM34B2RNG4 842 aa14.28□□□□□ -0.12
USF1-208ENST00000528768 K7ELQ4 463 aaPredicted RBP14.28□□□□□ -0.12
USF1-208ENST00000528768 ST18O60284 1047 aa14.28□□□□□ -0.12
USF1-208ENST00000528768 ERBB4Q15303 1308 aa14.28□□□□□ -0.12
USF1-208ENST00000528768 SAPCD2Q86UD0 394 aa14.28□□□□□ -0.12
USF1-208ENST00000528768 RHPN1Q8TCX5 695 aa14.28□□□□□ -0.12
USF1-208ENST00000528768 GJA3Q9Y6H8 435 aa14.28□□□□□ -0.12
USF1-208ENST00000528768 BCORQ6W2J9 1755 aa14.27□□□□□ -0.12
USF1-208ENST00000528768 SALL3Q9BXA9 1300 aa14.27□□□□□ -0.12
USF1-208ENST00000528768 GSE1Q14687 1217 aa14.27□□□□□ -0.13
USF1-208ENST00000528768 PRPF38BQ5VTL8 546 aaKnown RBP14.27□□□□□ -0.13
USF1-208ENST00000528768 CLASRPQ8N2M8 674 aaKnown RBP14.27□□□□□ -0.13
USF1-208ENST00000528768 TTC41PQ6P2S7 1318 aa14.26□□□□□ -0.13
USF1-208ENST00000528768 GRM8O00222 908 aa14.26□□□□□ -0.13
USF1-208ENST00000528768 AOC2O75106 756 aa14.26□□□□□ -0.13
USF1-208ENST00000528768 FRAT2O75474 233 aaPredicted RBP14.26□□□□□ -0.13
USF1-208ENST00000528768 ANXA1P04083 346 aa14.26□□□□□ -0.13
USF1-208ENST00000528768 A1BGP04217 495 aa14.26□□□□□ -0.13
USF1-208ENST00000528768 NBPF7P0C2Y1 421 aaPredicted RBP14.26□□□□□ -0.13
USF1-208ENST00000528768 SCNN1DP51172 638 aa14.26□□□□□ -0.13
USF1-208ENST00000528768 NOGQ13253 232 aa14.26□□□□□ -0.13
USF1-208ENST00000528768 RILPL2Q969X0 211 aa14.26□□□□□ -0.13
USF1-208ENST00000528768 TSKSQ9UJT2 592 aa14.26□□□□□ -0.13
USF1-208ENST00000528768 UTYO14607 1347 aa14.25□□□□□ -0.13
USF1-208ENST00000528768 EPS15P42566 896 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms