RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 FAM89AQ96GI7 184 aa16.11■□□□□ 0.17
SRPRA-202ENST00000527817 ISCA1Q9BUE6 129 aa16.11■□□□□ 0.17
SRPRA-202ENST00000527817 TRIM28Q13263 835 aaKnown RBP16.1■□□□□ 0.17
SRPRA-202ENST00000527817 ANKRD13DQ6ZTN6 518 aa16.1■□□□□ 0.17
SRPRA-202ENST00000527817 TBC1D16Q8TBP0 767 aa16.1■□□□□ 0.17
SRPRA-202ENST00000527817 ZC3H12CQ9C0D7 883 aaKnown RBP16.1■□□□□ 0.17
SRPRA-202ENST00000527817 PODXL2Q9NZ53 605 aa16.1■□□□□ 0.17
SRPRA-202ENST00000527817 LRRC37AA6NMS7 1700 aa16.1■□□□□ 0.17
SRPRA-202ENST00000527817 CHL1O00533 1208 aa16.09■□□□□ 0.17
SRPRA-202ENST00000527817 FKBP1BP68106 108 aa16.09■□□□□ 0.17
SRPRA-202ENST00000527817 LMOD3Q0VAK6 560 aa16.09■□□□□ 0.17
SRPRA-202ENST00000527817 PKN2Q16513 984 aaKnown RBP16.09■□□□□ 0.17
SRPRA-202ENST00000527817 PRPF38BQ5VTL8 546 aaKnown RBP16.09■□□□□ 0.17
SRPRA-202ENST00000527817 CDCA5Q96FF9 252 aa16.09■□□□□ 0.17
SRPRA-202ENST00000527817 GGA3Q9NZ52 723 aa16.09■□□□□ 0.17
SRPRA-202ENST00000527817 TMPOP42166 694 aaKnown RBP16.08■□□□□ 0.16
SRPRA-202ENST00000527817 ZNF280AP59817 542 aaPredicted RBP16.08■□□□□ 0.16
SRPRA-202ENST00000527817 SCARF1Q14162 830 aa16.08■□□□□ 0.16
SRPRA-202ENST00000527817 AGBL3Q8NEM8 1001 aa16.08■□□□□ 0.16
SRPRA-202ENST00000527817 RASAL3Q86YV0 1011 aa16.07■□□□□ 0.16
SRPRA-202ENST00000527817 ZNF428Q96B54 188 aa16.07■□□□□ 0.16
SRPRA-202ENST00000527817 CHPF2Q9P2E5 772 aa16.07■□□□□ 0.16
SRPRA-202ENST00000527817 ASTN2O75129 1339 aaPredicted RBP16.07■□□□□ 0.16
SRPRA-202ENST00000527817 ATP5J2-PTCD1G3V325 749 aa16.06■□□□□ 0.16
SRPRA-202ENST00000527817 G3V3G9 751 aa16.06■□□□□ 0.16
SRPRA-202ENST00000527817 IRS4O14654 1257 aaPredicted RBP16.06■□□□□ 0.16
SRPRA-202ENST00000527817 DCAF8Q5TAQ9 597 aa16.06■□□□□ 0.16
SRPRA-202ENST00000527817 RSBN1LQ6PCB5 846 aaPredicted RBP16.06■□□□□ 0.16
SRPRA-202ENST00000527817 HPS5Q9UPZ3 1129 aa16.06■□□□□ 0.16
SRPRA-202ENST00000527817 PITPNM2Q9BZ72 1349 aa16.05■□□□□ 0.16
SRPRA-202ENST00000527817 HOXB7P09629 217 aa16.05■□□□□ 0.16
SRPRA-202ENST00000527817 KRT24Q2M2I5 525 aa16.05■□□□□ 0.16
SRPRA-202ENST00000527817 ANGEL2Q5VTE6 544 aaKnown RBP16.05■□□□□ 0.16
SRPRA-202ENST00000527817 GMLQ99445 158 aa16.05■□□□□ 0.16
SRPRA-202ENST00000527817 DBF4Q9UBU7 674 aaPredicted RBP16.05■□□□□ 0.16
SRPRA-202ENST00000527817 DDX60Q8IY21 1712 aaKnown RBP16.05■□□□□ 0.16
SRPRA-202ENST00000527817 ZNF609O15014 1411 aa16.04■□□□□ 0.16
SRPRA-202ENST00000527817 SCN9AQ15858 1988 aa16.04■□□□□ 0.16
SRPRA-202ENST00000527817 HSP90B1P14625 803 aaKnown RBP16.04■□□□□ 0.16
SRPRA-202ENST00000527817 NOM1Q5C9Z4 860 aaKnown RBP16.04■□□□□ 0.16
SRPRA-202ENST00000527817 HDGFL1Q5TGJ6 251 aa16.04■□□□□ 0.16
SRPRA-202ENST00000527817 HYPKQ9NX55 129 aa16.04■□□□□ 0.16
SRPRA-202ENST00000527817 ANKIB1Q9P2G1 1089 aa16.04■□□□□ 0.16
SRPRA-202ENST00000527817 GGA1Q9UJY5 639 aa16.04■□□□□ 0.16
SRPRA-202ENST00000527817 HDAC9Q9UKV0 1011 aa16.04■□□□□ 0.16
SRPRA-202ENST00000527817 UFL1O94874 794 aa16.03■□□□□ 0.16
SRPRA-202ENST00000527817 USP17L8P0C7I0 530 aa16.03■□□□□ 0.16
SRPRA-202ENST00000527817 TM4SF4P48230 202 aa16.03■□□□□ 0.16
SRPRA-202ENST00000527817 RTL5Q5HYW3 569 aaPredicted RBP16.03■□□□□ 0.16
SRPRA-202ENST00000527817 ZNF296Q8WUU4 475 aaPredicted RBP16.03■□□□□ 0.16
SRPRA-202ENST00000527817 MYOZ2Q9NPC6 264 aa16.03■□□□□ 0.16
SRPRA-202ENST00000527817 SEC31BQ9NQW1 1179 aa16.03■□□□□ 0.16
SRPRA-202ENST00000527817 PODNQ7Z5L7 613 aa16.02■□□□□ 0.16
SRPRA-202ENST00000527817 ZBTB38Q8NAP3 1195 aaPredicted RBP16.02■□□□□ 0.16
SRPRA-202ENST00000527817 USP17L3A6NCW0 530 aa16.01■□□□□ 0.15
SRPRA-202ENST00000527817 USP17L4A6NCW7 530 aa16.01■□□□□ 0.15
SRPRA-202ENST00000527817 UBE2Q2LH0YL09 131 aa16.01■□□□□ 0.15
SRPRA-202ENST00000527817 TBC1D8O95759 1140 aa16.01■□□□□ 0.15
SRPRA-202ENST00000527817 USP17L1Q7RTZ2 530 aa16.01■□□□□ 0.15
SRPRA-202ENST00000527817 COL4A1P02462 1669 aa16.01■□□□□ 0.15
SRPRA-202ENST00000527817 GPR25O00155 361 aa16■□□□□ 0.15
SRPRA-202ENST00000527817 CCDC152Q4G0S7 254 aa16■□□□□ 0.15
SRPRA-202ENST00000527817 MOB2Q70IA6 237 aa16■□□□□ 0.15
SRPRA-202ENST00000527817 TRIM35Q9UPQ4 493 aa16■□□□□ 0.15
SRPRA-202ENST00000527817 LAS1LQ9Y4W2 734 aaKnown RBP16■□□□□ 0.15
SRPRA-202ENST00000527817 PAPPA2Q9BXP8 1791 aa16■□□□□ 0.15
SRPRA-202ENST00000527817 ATP2B4P23634 1241 aa15.99■□□□□ 0.15
SRPRA-202ENST00000527817 NEUROD2Q15784 382 aa15.99■□□□□ 0.15
SRPRA-202ENST00000527817 FBXO46Q6PJ61 603 aaPredicted RBP15.99■□□□□ 0.15
SRPRA-202ENST00000527817 RIC3Q7Z5B4 369 aa15.99■□□□□ 0.15
SRPRA-202ENST00000527817 CFHR5Q9BXR6 569 aa15.99■□□□□ 0.15
SRPRA-202ENST00000527817 XDHP47989 1333 aa15.98■□□□□ 0.15
SRPRA-202ENST00000527817 PDE8AO60658 829 aa15.98■□□□□ 0.15
SRPRA-202ENST00000527817 PCCAP05165 728 aaPredicted RBP15.98■□□□□ 0.15
SRPRA-202ENST00000527817 MMP14P50281 582 aa15.98■□□□□ 0.15
SRPRA-202ENST00000527817 DUSP27Q5VZP5 1158 aa15.98■□□□□ 0.15
SRPRA-202ENST00000527817 CCDC191Q8NCU4 936 aa15.98■□□□□ 0.15
SRPRA-202ENST00000527817 NBPF9Q3BBW0 867 aa15.97■□□□□ 0.15
SRPRA-202ENST00000527817 PRAMEF18Q5VWM3 479 aa15.97■□□□□ 0.15
SRPRA-202ENST00000527817 GCC1Q96CN9 775 aa15.97■□□□□ 0.15
SRPRA-202ENST00000527817 FKTNO75072 461 aa15.96■□□□□ 0.15
SRPRA-202ENST00000527817 NF2P35240 595 aa15.96■□□□□ 0.15
SRPRA-202ENST00000527817 GOLGA2Q08379 1002 aa15.96■□□□□ 0.15
SRPRA-202ENST00000527817 SREBF2Q12772 1141 aa15.96■□□□□ 0.15
SRPRA-202ENST00000527817 RALBP1Q15311 655 aa15.96■□□□□ 0.15
SRPRA-202ENST00000527817 ANKRD18AQ8IVF6 992 aa15.96■□□□□ 0.15
SRPRA-202ENST00000527817 SCAF8Q9UPN6 1271 aaKnown RBP15.96■□□□□ 0.15
SRPRA-202ENST00000527817 PSME4Q14997 1843 aa15.96■□□□□ 0.14
SRPRA-202ENST00000527817 WNT10BO00744 389 aa15.95■□□□□ 0.14
SRPRA-202ENST00000527817 TTLL12Q14166 644 aaPredicted RBP15.95■□□□□ 0.14
SRPRA-202ENST00000527817 OGFOD1Q8N543 542 aa15.95■□□□□ 0.14
SRPRA-202ENST00000527817 RUNDC1Q96C34 613 aa15.95■□□□□ 0.14
SRPRA-202ENST00000527817 PTPN12Q05209 780 aaKnown RBP15.94■□□□□ 0.14
SRPRA-202ENST00000527817 DACT2Q5SW24 774 aa15.94■□□□□ 0.14
SRPRA-202ENST00000527817 ARMC9Q7Z3E5 817 aa15.94■□□□□ 0.14
SRPRA-202ENST00000527817 CCDC146Q8IYE0 955 aa15.94■□□□□ 0.14
SRPRA-202ENST00000527817 MYD88Q99836 296 aa15.94■□□□□ 0.14
SRPRA-202ENST00000527817 PHAXQ9H814 394 aaKnown RBP15.94■□□□□ 0.14
SRPRA-202ENST00000527817 CWC25Q9NXE8 425 aaPredicted RBP15.94■□□□□ 0.14
SRPRA-202ENST00000527817 WTIPA6NIX2 430 aaPredicted RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms