RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 EPHX2P34913 555 aa33.35■■■□□ 2.93
TSPAN4-217ENST00000527644 HNRNPUQ00839 825 aaKnown RBP eCLIP33.35■■■□□ 2.93
TSPAN4-217ENST00000527644 UFL1O94874 794 aa33.34■■■□□ 2.93
TSPAN4-217ENST00000527644 LMOD1P29536 600 aaPredicted RBP33.34■■■□□ 2.93
TSPAN4-217ENST00000527644 CIAPIN1Q6FI81 312 aa33.34■■■□□ 2.93
TSPAN4-217ENST00000527644 ZC3H12CQ9C0D7 883 aaKnown RBP33.34■■■□□ 2.93
TSPAN4-217ENST00000527644 MINPP1Q9UNW1 487 aa33.34■■■□□ 2.93
TSPAN4-217ENST00000527644 TNIP1Q15025 636 aa33.33■■■□□ 2.93
TSPAN4-217ENST00000527644 CHADLQ6NUI6 762 aa33.33■■■□□ 2.93
TSPAN4-217ENST00000527644 PNMA8AQ86V59 439 aaPredicted RBP33.33■■■□□ 2.93
TSPAN4-217ENST00000527644 ANKRD18BA2A2Z9 1011 aa33.32■■■□□ 2.92
TSPAN4-217ENST00000527644 YDJCA8MPS7 323 aa33.32■■■□□ 2.92
TSPAN4-217ENST00000527644 POTEIP0CG38 1075 aa33.32■■■□□ 2.92
TSPAN4-217ENST00000527644 POTEJP0CG39 1038 aa33.32■■■□□ 2.92
TSPAN4-217ENST00000527644 ATP2B4P23634 1241 aa33.32■■■□□ 2.92
TSPAN4-217ENST00000527644 SCNN1DP51172 638 aa33.32■■■□□ 2.92
TSPAN4-217ENST00000527644 BRPF1P55201 1214 aaPredicted RBP33.32■■■□□ 2.92
TSPAN4-217ENST00000527644 LDHDQ86WU2 507 aa33.32■■■□□ 2.92
TSPAN4-217ENST00000527644 GPR101Q96P66 508 aaPredicted RBP33.31■■■□□ 2.92
TSPAN4-217ENST00000527644 MPHOSPH8Q99549 860 aa33.31■■■□□ 2.92
TSPAN4-217ENST00000527644 DBNDD1Q9H9R9 158 aa33.31■■■□□ 2.92
TSPAN4-217ENST00000527644 RAD17O75943 681 aa33.3■■■□□ 2.92
TSPAN4-217ENST00000527644 IFIT5Q13325 482 aaKnown RBP33.3■■■□□ 2.92
TSPAN4-217ENST00000527644 EAPPQ56P03 285 aaPredicted RBP33.3■■■□□ 2.92
TSPAN4-217ENST00000527644 UTYO14607 1347 aa33.29■■■□□ 2.92
TSPAN4-217ENST00000527644 EPHA10Q5JZY3 1008 aa33.29■■■□□ 2.92
TSPAN4-217ENST00000527644 LMBR1LQ6UX01 489 aa33.29■■■□□ 2.92
TSPAN4-217ENST00000527644 CHMP3Q9Y3E7 222 aa33.29■■■□□ 2.92
TSPAN4-217ENST00000527644 RARSP54136 660 aaKnown RBP33.28■■■□□ 2.92
TSPAN4-217ENST00000527644 DOK7Q18PE1 504 aa33.28■■■□□ 2.92
TSPAN4-217ENST00000527644 ECE2O60344 883 aa33.27■■■□□ 2.92
TSPAN4-217ENST00000527644 NBPF7P0C2Y1 421 aaPredicted RBP33.27■■■□□ 2.92
TSPAN4-217ENST00000527644 EPS15P42566 896 aa33.27■■■□□ 2.92
TSPAN4-217ENST00000527644 NOB1Q9ULX3 412 aaKnown RBP33.27■■■□□ 2.92
TSPAN4-217ENST00000527644 SPEF2Q9C093 1822 aa33.27■■■□□ 2.92
TSPAN4-217ENST00000527644 CEP350Q5VT06 3117 aa33.27■■■□□ 2.92
TSPAN4-217ENST00000527644 G3V3G9 751 aa33.26■■■□□ 2.91
TSPAN4-217ENST00000527644 DCAF8Q5TAQ9 597 aa33.26■■■□□ 2.91
TSPAN4-217ENST00000527644 ANKRD2Q9GZV1 360 aa33.26■■■□□ 2.91
TSPAN4-217ENST00000527644 GPRC5DQ9NZD1 345 aa33.26■■■□□ 2.91
TSPAN4-217ENST00000527644 GMPSP49915 693 aaPredicted RBP33.25■■■□□ 2.91
TSPAN4-217ENST00000527644 CCT4P50991 539 aaKnown RBP33.25■■■□□ 2.91
TSPAN4-217ENST00000527644 SUCLG2Q96I99 432 aa33.25■■■□□ 2.91
TSPAN4-217ENST00000527644 CLEC11AQ9Y240 323 aa33.25■■■□□ 2.91
TSPAN4-217ENST00000527644 CCDC57Q2TAC2 916 aa33.24■■■□□ 2.91
TSPAN4-217ENST00000527644 LEMD3Q9Y2U8 911 aa33.24■■■□□ 2.91
TSPAN4-217ENST00000527644 KAZALD1Q96I82 304 aa33.23■■■□□ 2.91
TSPAN4-217ENST00000527644 API5Q9BZZ5 524 aaKnown RBP33.23■■■□□ 2.91
TSPAN4-217ENST00000527644 PSMD14O00487 310 aa33.22■■■□□ 2.91
TSPAN4-217ENST00000527644 USP50Q70EL3 339 aaPredicted RBP33.22■■■□□ 2.91
TSPAN4-217ENST00000527644 ADARB2Q9NS39 739 aaKnown RBP33.22■■■□□ 2.91
TSPAN4-217ENST00000527644 ADAMTSL1Q8N6G6 1762 aa33.21■■■□□ 2.91
TSPAN4-217ENST00000527644 USP44Q9H0E7 712 aa33.21■■■□□ 2.91
TSPAN4-217ENST00000527644 MED23Q9ULK4 1368 aa33.21■■■□□ 2.91
TSPAN4-217ENST00000527644 WTIPA6NIX2 430 aaPredicted RBP33.2■■■□□ 2.91
TSPAN4-217ENST00000527644 CHRNDQ07001 517 aa33.2■■■□□ 2.91
TSPAN4-217ENST00000527644 TAF7LQ5H9L4 462 aa33.2■■■□□ 2.91
TSPAN4-217ENST00000527644 KCNQ5Q9NR82 932 aa33.2■■■□□ 2.91
TSPAN4-217ENST00000527644 ARHGAP45Q92619 1136 aa33.19■■■□□ 2.9
TSPAN4-217ENST00000527644 DPF2Q92785 391 aa33.19■■■□□ 2.9
TSPAN4-217ENST00000527644 KIF16BQ96L93 1317 aa33.19■■■□□ 2.9
TSPAN4-217ENST00000527644 ZNF804BA4D1E1 1349 aa33.18■■■□□ 2.9
TSPAN4-217ENST00000527644 RPS12P25398 132 aaKnown RBP33.17■■■□□ 2.9
TSPAN4-217ENST00000527644 RABL6Q3YEC7 729 aaPredicted RBP33.17■■■□□ 2.9
TSPAN4-217ENST00000527644 LDHAL6AQ6ZMR3 332 aa33.17■■■□□ 2.9
TSPAN4-217ENST00000527644 PODNQ7Z5L7 613 aa33.17■■■□□ 2.9
TSPAN4-217ENST00000527644 BICC1Q9H694 974 aaKnown RBP33.17■■■□□ 2.9
TSPAN4-217ENST00000527644 CNOT7Q9UIV1 285 aaKnown RBP33.17■■■□□ 2.9
TSPAN4-217ENST00000527644 ZBTB12Q9Y330 459 aaPredicted RBP33.17■■■□□ 2.9
TSPAN4-217ENST00000527644 ZBED9Q6R2W3 1325 aa33.17■■■□□ 2.9
TSPAN4-217ENST00000527644 ZNF594Q96JF6 807 aaPredicted RBP33.16■■■□□ 2.9
TSPAN4-217ENST00000527644 H7C1D1 291 aa33.15■■■□□ 2.9
TSPAN4-217ENST00000527644 ITGBL1O95965 494 aaPredicted RBP33.15■■■□□ 2.9
TSPAN4-217ENST00000527644 VIL1P09327 827 aaKnown RBP33.15■■■□□ 2.9
TSPAN4-217ENST00000527644 HTRA3P83110 453 aa33.15■■■□□ 2.9
TSPAN4-217ENST00000527644 CNTROBQ8N137 903 aa33.15■■■□□ 2.9
TSPAN4-217ENST00000527644 PASKQ96RG2 1323 aa33.14■■■□□ 2.9
TSPAN4-217ENST00000527644 KCNJ4P48050 445 aa33.14■■■□□ 2.9
TSPAN4-217ENST00000527644 MAP1SQ66K74 1059 aaPredicted RBP33.14■■■□□ 2.9
TSPAN4-217ENST00000527644 DNAJC5GQ8N7S2 189 aa33.14■■■□□ 2.9
TSPAN4-217ENST00000527644 ANKRD44Q8N8A2 993 aa33.14■■■□□ 2.9
TSPAN4-217ENST00000527644 CNNM1Q9NRU3 951 aa33.14■■■□□ 2.9
TSPAN4-217ENST00000527644 SCN9AQ15858 1988 aa33.13■■■□□ 2.89
TSPAN4-217ENST00000527644 MICALL2Q8IY33 904 aa33.13■■■□□ 2.89
TSPAN4-217ENST00000527644 COA1Q9GZY4 146 aa33.13■■■□□ 2.89
TSPAN4-217ENST00000527644 IPO8O15397 1037 aaKnown RBP33.12■■■□□ 2.89
TSPAN4-217ENST00000527644 TAF5LO75529 589 aa33.11■■■□□ 2.89
TSPAN4-217ENST00000527644 TXNRD3Q86VQ6 643 aa33.11■■■□□ 2.89
TSPAN4-217ENST00000527644 HELBQ8NG08 1087 aaPredicted RBP33.11■■■□□ 2.89
TSPAN4-217ENST00000527644 BCAR3O75815 825 aa33.1■■■□□ 2.89
TSPAN4-217ENST00000527644 SHTN1A0MZ66 631 aa33.09■■■□□ 2.89
TSPAN4-217ENST00000527644 USP17L3A6NCW0 530 aa33.09■■■□□ 2.89
TSPAN4-217ENST00000527644 USP17L4A6NCW7 530 aa33.09■■■□□ 2.89
TSPAN4-217ENST00000527644 RSBN1LQ6PCB5 846 aaPredicted RBP33.09■■■□□ 2.89
TSPAN4-217ENST00000527644 USP17L1Q7RTZ2 530 aa33.09■■■□□ 2.89
TSPAN4-217ENST00000527644 KLRK1P26718 216 aa33.08■■■□□ 2.89
TSPAN4-217ENST00000527644 C15orf52Q6ZUT6 534 aaKnown RBP33.08■■■□□ 2.89
TSPAN4-217ENST00000527644 AGBL3Q8NEM8 1001 aa33.08■■■□□ 2.89
TSPAN4-217ENST00000527644 ZC3H15Q8WU90 426 aaKnown RBP33.08■■■□□ 2.89
TSPAN4-217ENST00000527644 CREBZFQ9NS37 354 aa33.08■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms