RNA–Protein interactions for RNA: ENST00000527339.1

LTBP3-208, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-208ENST00000527339 CELF1Q92879 486 aaKnown RBP21.92■■□□□ 1.1
LTBP3-208ENST00000527339 RTL9Q8NET4 1388 aa21.91■■□□□ 1.1
LTBP3-208ENST00000527339 EPS15P42566 896 aa21.91■■□□□ 1.1
LTBP3-208ENST00000527339 SCNN1DP51172 638 aa21.91■■□□□ 1.1
LTBP3-208ENST00000527339 LBX1P52954 281 aa21.91■■□□□ 1.1
LTBP3-208ENST00000527339 PNMA8AQ86V59 439 aaPredicted RBP21.91■■□□□ 1.1
LTBP3-208ENST00000527339 GJA3Q9Y6H8 435 aa21.91■■□□□ 1.1
LTBP3-208ENST00000527339 SPEF2Q9C093 1822 aa21.91■■□□□ 1.1
LTBP3-208ENST00000527339 IPO8O15397 1037 aaKnown RBP21.9■■□□□ 1.1
LTBP3-208ENST00000527339 BCAR3O75815 825 aa21.9■■□□□ 1.1
LTBP3-208ENST00000527339 CTCFP49711 727 aaPredicted RBP21.9■■□□□ 1.1
LTBP3-208ENST00000527339 RPS8P62241 208 aaKnown RBP21.9■■□□□ 1.1
LTBP3-208ENST00000527339 CCDC85AQ96PX6 553 aaPredicted RBP21.9■■□□□ 1.1
LTBP3-208ENST00000527339 SEC31BQ9NQW1 1179 aa21.9■■□□□ 1.1
LTBP3-208ENST00000527339 UTYO14607 1347 aa21.89■■□□□ 1.1
LTBP3-208ENST00000527339 CCT4P50991 539 aaKnown RBP21.89■■□□□ 1.09
LTBP3-208ENST00000527339 DEFB115Q30KQ5 88 aa21.89■■□□□ 1.09
LTBP3-208ENST00000527339 CSF1RP07333 972 aa21.88■■□□□ 1.09
LTBP3-208ENST00000527339 JDP2Q8WYK2 163 aa21.88■■□□□ 1.09
LTBP3-208ENST00000527339 CDC5LQ99459 802 aaKnown RBP21.88■■□□□ 1.09
LTBP3-208ENST00000527339 GREM2Q9H772 168 aa21.88■■□□□ 1.09
LTBP3-208ENST00000527339 WDR33Q9C0J8 1336 aaKnown RBP21.87■■□□□ 1.09
LTBP3-208ENST00000527339 HSPA8P11142 646 aaKnown RBP21.87■■□□□ 1.09
LTBP3-208ENST00000527339 ANKRD18AQ8IVF6 992 aa21.87■■□□□ 1.09
LTBP3-208ENST00000527339 TRAF5O00463 557 aa21.86■■□□□ 1.09
LTBP3-208ENST00000527339 NBPF7P0C2Y1 421 aaPredicted RBP21.86■■□□□ 1.09
LTBP3-208ENST00000527339 FOXO4P98177 505 aa21.86■■□□□ 1.09
LTBP3-208ENST00000527339 LARGE2Q8N3Y3 721 aa21.86■■□□□ 1.09
LTBP3-208ENST00000527339 FRAT1Q92837 279 aaPredicted RBP21.86■■□□□ 1.09
LTBP3-208ENST00000527339 AIDAQ96BJ3 306 aa21.86■■□□□ 1.09
LTBP3-208ENST00000527339 EIF6P56537 245 aaKnown RBP21.85■■□□□ 1.09
LTBP3-208ENST00000527339 CST9Q5W186 159 aa21.85■■□□□ 1.09
LTBP3-208ENST00000527339 DPP8Q6V1X1 898 aaPredicted RBP21.85■■□□□ 1.09
LTBP3-208ENST00000527339 ATF7IPQ6VMQ6 1270 aa21.85■■□□□ 1.09
LTBP3-208ENST00000527339 MPNDQ8N594 471 aa21.85■■□□□ 1.09
LTBP3-208ENST00000527339 ABT1Q9ULW3 272 aaKnown RBP21.85■■□□□ 1.09
LTBP3-208ENST00000527339 TRIM27P14373 513 aa21.84■■□□□ 1.09
LTBP3-208ENST00000527339 ITGA6P23229 1130 aa21.84■■□□□ 1.09
LTBP3-208ENST00000527339 FAM161AQ3B820 660 aa21.84■■□□□ 1.09
LTBP3-208ENST00000527339 SUPT20HQ8NEM7 779 aa21.84■■□□□ 1.09
LTBP3-208ENST00000527339 RTFDC1Q9BY42 306 aaPredicted RBP21.84■■□□□ 1.09
LTBP3-208ENST00000527339 USP44Q9H0E7 712 aa21.84■■□□□ 1.09
LTBP3-208ENST00000527339 DUOX1Q9NRD9 1551 aa21.83■■□□□ 1.09
LTBP3-208ENST00000527339 AOC3Q16853 763 aa21.83■■□□□ 1.09
LTBP3-208ENST00000527339 ZKSCAN2Q63HK3 967 aa21.83■■□□□ 1.09
LTBP3-208ENST00000527339 SUCLG2Q96I99 432 aa21.83■■□□□ 1.09
LTBP3-208ENST00000527339 VPS33BQ9H267 617 aa21.83■■□□□ 1.09
LTBP3-208ENST00000527339 EPHA10Q5JZY3 1008 aa21.82■■□□□ 1.08
LTBP3-208ENST00000527339 INTS3Q68E01 1043 aaKnown RBP21.82■■□□□ 1.08
LTBP3-208ENST00000527339 LMBR1LQ6UX01 489 aa21.82■■□□□ 1.08
LTBP3-208ENST00000527339 KAZALD1Q96I82 304 aa21.82■■□□□ 1.08
LTBP3-208ENST00000527339 BSDC1Q9NW68 430 aaPredicted RBP21.82■■□□□ 1.08
LTBP3-208ENST00000527339 ANKRD18BA2A2Z9 1011 aa21.81■■□□□ 1.08
LTBP3-208ENST00000527339 IGHMBP2P38935 993 aaKnown RBP21.81■■□□□ 1.08
LTBP3-208ENST00000527339 IFIT5Q13325 482 aaKnown RBP21.81■■□□□ 1.08
LTBP3-208ENST00000527339 CYP4F22Q6NT55 531 aa21.81■■□□□ 1.08
LTBP3-208ENST00000527339 NSFL1CQ9UNZ2 370 aaKnown RBP21.81■■□□□ 1.08
LTBP3-208ENST00000527339 CHMP3Q9Y3E7 222 aa21.81■■□□□ 1.08
LTBP3-208ENST00000527339 THSD7BQ9C0I4 1608 aa21.8■■□□□ 1.08
LTBP3-208ENST00000527339 PPIP5K2O43314 1243 aa21.8■■□□□ 1.08
LTBP3-208ENST00000527339 LMOD1P29536 600 aaPredicted RBP21.8■■□□□ 1.08
LTBP3-208ENST00000527339 GPSM2P81274 684 aa21.8■■□□□ 1.08
LTBP3-208ENST00000527339 CAPNS2Q96L46 248 aa21.8■■□□□ 1.08
LTBP3-208ENST00000527339 PODXL2Q9NZ53 605 aa21.8■■□□□ 1.08
LTBP3-208ENST00000527339 CXCL9Q07325 125 aa21.79■■□□□ 1.08
LTBP3-208ENST00000527339 CCDC57Q2TAC2 916 aa21.79■■□□□ 1.08
LTBP3-208ENST00000527339 RABL6Q3YEC7 729 aaPredicted RBP21.79■■□□□ 1.08
LTBP3-208ENST00000527339 USP50Q70EL3 339 aaPredicted RBP21.79■■□□□ 1.08
LTBP3-208ENST00000527339 NIM1KQ8IY84 436 aa21.79■■□□□ 1.08
LTBP3-208ENST00000527339 BICC1Q9H694 974 aaKnown RBP21.79■■□□□ 1.08
LTBP3-208ENST00000527339 TRPM7Q96QT4 1865 aa21.79■■□□□ 1.08
LTBP3-208ENST00000527339 UBTFL1P0CB47 393 aaPredicted RBP21.78■■□□□ 1.08
LTBP3-208ENST00000527339 MAP2K1Q02750 393 aaPredicted RBP21.78■■□□□ 1.08
LTBP3-208ENST00000527339 CLUAP1Q96AJ1 413 aa21.78■■□□□ 1.08
LTBP3-208ENST00000527339 ABHD8Q96I13 439 aa21.78■■□□□ 1.08
LTBP3-208ENST00000527339 YTHDC1Q96MU7 727 aaKnown RBP21.78■■□□□ 1.08
LTBP3-208ENST00000527339 MPHOSPH8Q99549 860 aa21.78■■□□□ 1.08
LTBP3-208ENST00000527339 GPRC5DQ9NZD1 345 aa21.78■■□□□ 1.08
LTBP3-208ENST00000527339 ANKIB1Q9P2G1 1089 aa21.78■■□□□ 1.08
LTBP3-208ENST00000527339 TNNQ9UQP3 1299 aa21.78■■□□□ 1.08
LTBP3-208ENST00000527339 A0A1B0GUL6 1792 aa21.78■■□□□ 1.08
LTBP3-208ENST00000527339 KIAA2012Q0VF49 1180 aa21.77■■□□□ 1.08
LTBP3-208ENST00000527339 GRM1Q13255 1194 aa21.77■■□□□ 1.08
LTBP3-208ENST00000527339 POLLQ9UGP5 575 aa21.77■■□□□ 1.08
LTBP3-208ENST00000527339 MINPP1Q9UNW1 487 aa21.77■■□□□ 1.08
LTBP3-208ENST00000527339 HDAC5Q9UQL6 1122 aa21.77■■□□□ 1.08
LTBP3-208ENST00000527339 XDHP47989 1333 aa21.77■■□□□ 1.07
LTBP3-208ENST00000527339 SHTN1A0MZ66 631 aa21.76■■□□□ 1.07
LTBP3-208ENST00000527339 C6orf229H3BNL8 230 aa21.76■■□□□ 1.07
LTBP3-208ENST00000527339 AOC2O75106 756 aa21.76■■□□□ 1.07
LTBP3-208ENST00000527339 HIRAP54198 1017 aaPredicted RBP21.76■■□□□ 1.07
LTBP3-208ENST00000527339 ANKRD44Q8N8A2 993 aa21.76■■□□□ 1.07
LTBP3-208ENST00000527339 TBC1D16Q8TBP0 767 aa21.76■■□□□ 1.07
LTBP3-208ENST00000527339 GPR101Q96P66 508 aaPredicted RBP21.76■■□□□ 1.07
LTBP3-208ENST00000527339 EYA3Q99504 573 aa21.76■■□□□ 1.07
LTBP3-208ENST00000527339 TSKSQ9UJT2 592 aa21.76■■□□□ 1.07
LTBP3-208ENST00000527339 GGA1Q9UJY5 639 aa21.76■■□□□ 1.07
LTBP3-208ENST00000527339 RCAN3Q9UKA8 241 aa21.76■■□□□ 1.07
LTBP3-208ENST00000527339 TLL2Q9Y6L7 1015 aa21.76■■□□□ 1.07
LTBP3-208ENST00000527339 GNAI3P08754 354 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms