RNA–Protein interactions for RNA: ENST00000527215.6

CTSB-213, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-213ENST00000527215 RAD17O75943 681 aa20.47■□□□□ 0.87
CTSB-213ENST00000527215 EPS15P42566 896 aa20.47■□□□□ 0.87
CTSB-213ENST00000527215 CIAPIN1Q6FI81 312 aa20.47■□□□□ 0.87
CTSB-213ENST00000527215 DBNDD1Q9H9R9 158 aa20.47■□□□□ 0.87
CTSB-213ENST00000527215 CLEC11AQ9Y240 323 aa20.47■□□□□ 0.87
CTSB-213ENST00000527215 UFL1O94874 794 aa20.46■□□□□ 0.87
CTSB-213ENST00000527215 GGA1Q9UJY5 639 aa20.46■□□□□ 0.87
CTSB-213ENST00000527215 TRPM7Q96QT4 1865 aa20.45■□□□□ 0.86
CTSB-213ENST00000527215 GMPSP49915 693 aaPredicted RBP20.45■□□□□ 0.86
CTSB-213ENST00000527215 TNIP1Q15025 636 aa20.45■□□□□ 0.86
CTSB-213ENST00000527215 SLC4A10Q6U841 1118 aa20.45■□□□□ 0.86
CTSB-213ENST00000527215 MRPL50Q8N5N7 158 aaKnown RBP20.45■□□□□ 0.86
CTSB-213ENST00000527215 GPRC5DQ9NZD1 345 aa20.45■□□□□ 0.86
CTSB-213ENST00000527215 ECE2O60344 883 aa20.44■□□□□ 0.86
CTSB-213ENST00000527215 DOK7Q18PE1 504 aa20.44■□□□□ 0.86
CTSB-213ENST00000527215 FAM161AQ3B820 660 aa20.44■□□□□ 0.86
CTSB-213ENST00000527215 ZC3H12CQ9C0D7 883 aaKnown RBP20.44■□□□□ 0.86
CTSB-213ENST00000527215 BSDC1Q9NW68 430 aaPredicted RBP20.44■□□□□ 0.86
CTSB-213ENST00000527215 XDHP47989 1333 aa20.44■□□□□ 0.86
CTSB-213ENST00000527215 CSF1RP07333 972 aa20.43■□□□□ 0.86
CTSB-213ENST00000527215 HSPA1AP0DMV8 641 aaKnown RBP20.43■□□□□ 0.86
CTSB-213ENST00000527215 HSPA1BP0DMV9 641 aaKnown RBP20.43■□□□□ 0.86
CTSB-213ENST00000527215 ITGA6P23229 1130 aa20.43■□□□□ 0.86
CTSB-213ENST00000527215 DIEXFQ68CQ4 756 aaKnown RBP20.43■□□□□ 0.86
CTSB-213ENST00000527215 TRMT2AQ8IZ69 625 aaKnown RBP20.43■□□□□ 0.86
CTSB-213ENST00000527215 BCL2L13Q9BXK5 485 aa20.43■□□□□ 0.86
CTSB-213ENST00000527215 PASKQ96RG2 1323 aa20.43■□□□□ 0.86
CTSB-213ENST00000527215 ZNF646O15015 1829 aaPredicted RBP20.43■□□□□ 0.86
CTSB-213ENST00000527215 ALDH1L1O75891 902 aa20.42■□□□□ 0.86
CTSB-213ENST00000527215 ITGBL1O95965 494 aaPredicted RBP20.42■□□□□ 0.86
CTSB-213ENST00000527215 IGHMBP2P38935 993 aaKnown RBP20.42■□□□□ 0.86
CTSB-213ENST00000527215 MAP1SQ66K74 1059 aaPredicted RBP20.42■□□□□ 0.86
CTSB-213ENST00000527215 SSH1Q8WYL5 1049 aa20.42■□□□□ 0.86
CTSB-213ENST00000527215 SRCIN1Q9C0H9 1055 aa20.42■□□□□ 0.86
CTSB-213ENST00000527215 MINPP1Q9UNW1 487 aa20.42■□□□□ 0.86
CTSB-213ENST00000527215 GRM8O00222 908 aa20.41■□□□□ 0.86
CTSB-213ENST00000527215 PSMD14O00487 310 aa20.41■□□□□ 0.86
CTSB-213ENST00000527215 ATP2B4P23634 1241 aa20.41■□□□□ 0.86
CTSB-213ENST00000527215 FOXO4P98177 505 aa20.41■□□□□ 0.86
CTSB-213ENST00000527215 COL13A1Q5TAT6 717 aaPredicted RBP20.41■□□□□ 0.86
CTSB-213ENST00000527215 USP50Q70EL3 339 aaPredicted RBP20.41■□□□□ 0.86
CTSB-213ENST00000527215 MIER1Q8N108 512 aa20.41■□□□□ 0.86
CTSB-213ENST00000527215 KCNQ5Q9NR82 932 aa20.41■□□□□ 0.86
CTSB-213ENST00000527215 ADARB2Q9NS39 739 aaKnown RBP20.41■□□□□ 0.86
CTSB-213ENST00000527215 MKRN1Q9UHC7 482 aaKnown RBP20.41■□□□□ 0.86
CTSB-213ENST00000527215 POLR2AP24928 1970 aaKnown RBP20.41■□□□□ 0.86
CTSB-213ENST00000527215 PTPRCP08575 1304 aa20.4■□□□□ 0.86
CTSB-213ENST00000527215 CNTNAP1P78357 1384 aa20.4■□□□□ 0.86
CTSB-213ENST00000527215 CNTROBQ8N137 903 aa20.4■□□□□ 0.86
CTSB-213ENST00000527215 C9orf78Q9NZ63 289 aaPredicted RBP20.4■□□□□ 0.86
CTSB-213ENST00000527215 WTIPA6NIX2 430 aaPredicted RBP20.39■□□□□ 0.85
CTSB-213ENST00000527215 TMEM88BA6NKF7 163 aa20.39■□□□□ 0.85
CTSB-213ENST00000527215 G3V3G9 751 aa20.39■□□□□ 0.85
CTSB-213ENST00000527215 DCAF8Q5TAQ9 597 aa20.39■□□□□ 0.85
CTSB-213ENST00000527215 TNS4Q8IZW8 715 aa20.39■□□□□ 0.85
CTSB-213ENST00000527215 ZBTB12Q9Y330 459 aaPredicted RBP20.39■□□□□ 0.85
CTSB-213ENST00000527215 SHTN1A0MZ66 631 aa20.38■□□□□ 0.85
CTSB-213ENST00000527215 ANKRD18BA2A2Z9 1011 aa20.38■□□□□ 0.85
CTSB-213ENST00000527215 CCT4P50991 539 aaKnown RBP20.38■□□□□ 0.85
CTSB-213ENST00000527215 ALDH1L2Q3SY69 923 aa20.38■□□□□ 0.85
CTSB-213ENST00000527215 EPHA10Q5JZY3 1008 aa20.38■□□□□ 0.85
CTSB-213ENST00000527215 MPHOSPH8Q99549 860 aa20.38■□□□□ 0.85
CTSB-213ENST00000527215 CNOT7Q9UIV1 285 aaKnown RBP20.38■□□□□ 0.85
CTSB-213ENST00000527215 CHMP3Q9Y3E7 222 aa20.38■□□□□ 0.85
CTSB-213ENST00000527215 MED23Q9ULK4 1368 aa20.37■□□□□ 0.85
CTSB-213ENST00000527215 LMBR1LQ6UX01 489 aa20.37■□□□□ 0.85
CTSB-213ENST00000527215 IFIT5Q13325 482 aaKnown RBP20.36■□□□□ 0.85
CTSB-213ENST00000527215 MICALL2Q8IY33 904 aa20.36■□□□□ 0.85
CTSB-213ENST00000527215 DPF2Q92785 391 aa20.36■□□□□ 0.85
CTSB-213ENST00000527215 SMC4Q9NTJ3 1288 aa20.36■□□□□ 0.85
CTSB-213ENST00000527215 CT47B1P0C2W7 299 aaPredicted RBP20.35■□□□□ 0.85
CTSB-213ENST00000527215 NBPF7P0C2Y1 421 aaPredicted RBP20.35■□□□□ 0.85
CTSB-213ENST00000527215 TRPM4Q8TD43 1214 aa20.35■□□□□ 0.85
CTSB-213ENST00000527215 ANKRD2Q9GZV1 360 aa20.35■□□□□ 0.85
CTSB-213ENST00000527215 H7C1D1 291 aa20.34■□□□□ 0.85
CTSB-213ENST00000527215 RPS12P25398 132 aaKnown RBP20.34■□□□□ 0.85
CTSB-213ENST00000527215 HIRAP54198 1017 aaPredicted RBP20.34■□□□□ 0.85
CTSB-213ENST00000527215 CHRNDQ07001 517 aa20.34■□□□□ 0.85
CTSB-213ENST00000527215 SUCLG2Q96I99 432 aa20.34■□□□□ 0.85
CTSB-213ENST00000527215 LEMD3Q9Y2U8 911 aa20.34■□□□□ 0.85
CTSB-213ENST00000527215 ZNF804BA4D1E1 1349 aa20.33■□□□□ 0.85
CTSB-213ENST00000527215 UTYO14607 1347 aa20.33■□□□□ 0.85
CTSB-213ENST00000527215 VIL1P09327 827 aaKnown RBP20.33■□□□□ 0.85
CTSB-213ENST00000527215 AIDAQ96BJ3 306 aa20.33■□□□□ 0.85
CTSB-213ENST00000527215 KAZALD1Q96I82 304 aa20.33■□□□□ 0.85
CTSB-213ENST00000527215 FMR1Q06787 632 aaKnown RBP eCLIP20.32■□□□□ 0.84
CTSB-213ENST00000527215 CCDC57Q2TAC2 916 aa20.32■□□□□ 0.84
CTSB-213ENST00000527215 SAMD7Q7Z3H4 446 aa20.32■□□□□ 0.84
CTSB-213ENST00000527215 PODNQ7Z5L7 613 aa20.32■□□□□ 0.84
CTSB-213ENST00000527215 TXNRD3Q86VQ6 643 aa20.32■□□□□ 0.84
CTSB-213ENST00000527215 ZNF594Q96JF6 807 aaPredicted RBP20.32■□□□□ 0.84
CTSB-213ENST00000527215 ZNF609O15014 1411 aa20.32■□□□□ 0.84
CTSB-213ENST00000527215 PCNTO95613 3336 aa20.32■□□□□ 0.84
CTSB-213ENST00000527215 KLRK1P26718 216 aa20.31■□□□□ 0.84
CTSB-213ENST00000527215 TAF7LQ5H9L4 462 aa20.31■□□□□ 0.84
CTSB-213ENST00000527215 PGAP2Q9UHJ9 254 aa20.31■□□□□ 0.84
CTSB-213ENST00000527215 TRAF5O00463 557 aa20.3■□□□□ 0.84
CTSB-213ENST00000527215 TAF5LO75529 589 aa20.3■□□□□ 0.84
CTSB-213ENST00000527215 EGFRP00533 1210 aa20.3■□□□□ 0.84
CTSB-213ENST00000527215 KCNJ4P48050 445 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms