RNA–Protein interactions for RNA: ENST00000527125.1

SCN3B-203, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 3

Gene SCN3B, Length 3,289 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-203ENST00000527125 CTAGE5O15320 804 aa10.94□□□□□ -0.66
SCN3B-203ENST00000527125 GTF2E1P29083 439 aaPredicted RBP10.94□□□□□ -0.66
SCN3B-203ENST00000527125 RFX5P48382 616 aaPredicted RBP10.94□□□□□ -0.66
SCN3B-203ENST00000527125 EVCP57679 992 aa10.94□□□□□ -0.66
SCN3B-203ENST00000527125 LRP10Q7Z4F1 713 aa10.94□□□□□ -0.66
SCN3B-203ENST00000527125 TICAM2Q86XR7 235 aa10.94□□□□□ -0.66
SCN3B-203ENST00000527125 CLASRPQ8N2M8 674 aaKnown RBP10.94□□□□□ -0.66
SCN3B-203ENST00000527125 TMX1Q9H3N1 280 aa10.94□□□□□ -0.66
SCN3B-203ENST00000527125 JAK2O60674 1132 aa10.94□□□□□ -0.66
SCN3B-203ENST00000527125 PFKFB2O60825 505 aa10.94□□□□□ -0.66
SCN3B-203ENST00000527125 EXOSC10Q01780 885 aaKnown RBP10.94□□□□□ -0.66
SCN3B-203ENST00000527125 FERMT3Q86UX7 667 aa10.94□□□□□ -0.66
SCN3B-203ENST00000527125 LGR6Q9HBX8 967 aa10.94□□□□□ -0.66
SCN3B-203ENST00000527125 IMPACTQ9P2X3 320 aa10.94□□□□□ -0.66
SCN3B-203ENST00000527125 PAPPAQ13219 1627 aa10.94□□□□□ -0.66
SCN3B-203ENST00000527125 ZKSCAN1P17029 563 aaPredicted RBP10.93□□□□□ -0.66
SCN3B-203ENST00000527125 HDGFP51858 240 aaKnown RBP10.93□□□□□ -0.66
SCN3B-203ENST00000527125 RGS22Q8NE09 1264 aa10.93□□□□□ -0.66
SCN3B-203ENST00000527125 TRIM5Q9C035 493 aa10.93□□□□□ -0.66
SCN3B-203ENST00000527125 TFIP11Q9UBB9 837 aaKnown RBP10.93□□□□□ -0.66
SCN3B-203ENST00000527125 PA2G4Q9UQ80 394 aaKnown RBP10.93□□□□□ -0.66
SCN3B-203ENST00000527125 STX1AQ16623 288 aa10.93□□□□□ -0.66
SCN3B-203ENST00000527125 KSR2Q6VAB6 950 aa10.93□□□□□ -0.66
SCN3B-203ENST00000527125 FMR1NBQ8N0W7 255 aaPredicted RBP10.93□□□□□ -0.66
SCN3B-203ENST00000527125 KRT222Q8N1A0 295 aa10.93□□□□□ -0.66
SCN3B-203ENST00000527125 NSUN7Q8NE18 718 aaKnown RBP10.93□□□□□ -0.66
SCN3B-203ENST00000527125 SUCLG2Q96I99 432 aa10.93□□□□□ -0.66
SCN3B-203ENST00000527125 PSDA5PKW4 1024 aaPredicted RBP10.92□□□□□ -0.66
SCN3B-203ENST00000527125 SCRN1Q12765 414 aa10.92□□□□□ -0.66
SCN3B-203ENST00000527125 NCAPHQ15003 741 aa10.92□□□□□ -0.66
SCN3B-203ENST00000527125 BLOC1S2Q6QNY1 142 aa10.92□□□□□ -0.66
SCN3B-203ENST00000527125 STOX1Q6ZVD7 989 aa10.92□□□□□ -0.66
SCN3B-203ENST00000527125 USP16Q9Y5T5 823 aa10.92□□□□□ -0.66
SCN3B-203ENST00000527125 PALLDQ8WX93 1383 aa10.92□□□□□ -0.66
SCN3B-203ENST00000527125 LRRN4CLQ8ND94 238 aa10.92□□□□□ -0.66
SCN3B-203ENST00000527125 CYP2C19P33261 490 aa10.92□□□□□ -0.66
SCN3B-203ENST00000527125 PROSER3Q2NL68 480 aa10.92□□□□□ -0.66
SCN3B-203ENST00000527125 ARMCX5Q6P1M9 558 aa10.92□□□□□ -0.66
SCN3B-203ENST00000527125 BRF1Q92994 677 aa10.92□□□□□ -0.66
SCN3B-203ENST00000527125 TBX22Q9Y458 520 aa10.92□□□□□ -0.66
SCN3B-203ENST00000527125 FER1L4A9Z1Z3 1794 aa10.91□□□□□ -0.66
SCN3B-203ENST00000527125 CARMIL3Q8ND23 1372 aa10.91□□□□□ -0.66
SCN3B-203ENST00000527125 CCDC69A6NI79 296 aa10.91□□□□□ -0.66
SCN3B-203ENST00000527125 TRIM65Q6PJ69 517 aa10.91□□□□□ -0.66
SCN3B-203ENST00000527125 DDX54Q8TDD1 881 aaKnown RBP10.91□□□□□ -0.66
SCN3B-203ENST00000527125 ADAMTSL3P82987 1691 aa10.91□□□□□ -0.66
SCN3B-203ENST00000527125 SH3TC1Q8TE82 1336 aa10.91□□□□□ -0.66
SCN3B-203ENST00000527125 IGKV5-2P06315 115 aa10.91□□□□□ -0.66
SCN3B-203ENST00000527125 ATP5JP18859 108 aa10.91□□□□□ -0.66
SCN3B-203ENST00000527125 PLA2G4AP47712 749 aa10.91□□□□□ -0.66
SCN3B-203ENST00000527125 MYO5AQ9Y4I1 1855 aaKnown RBP10.91□□□□□ -0.66
SCN3B-203ENST00000527125 IGSF3O75054 1194 aa10.9□□□□□ -0.66
SCN3B-203ENST00000527125 TUBB4AP04350 444 aa10.9□□□□□ -0.66
SCN3B-203ENST00000527125 SKILP12757 684 aa10.9□□□□□ -0.66
SCN3B-203ENST00000527125 TPD52L1Q16890 204 aaPredicted RBP10.9□□□□□ -0.66
SCN3B-203ENST00000527125 IP6K1Q92551 441 aa10.9□□□□□ -0.66
SCN3B-203ENST00000527125 DBF4Q9UBU7 674 aaPredicted RBP10.9□□□□□ -0.66
SCN3B-203ENST00000527125 A0A1W2PQ27 194 aa10.9□□□□□ -0.66
SCN3B-203ENST00000527125 A0A1W2PQ64 194 aa10.9□□□□□ -0.66
SCN3B-203ENST00000527125 A0A1W2PQD8 194 aa10.9□□□□□ -0.66
SCN3B-203ENST00000527125 KIF2AO00139 706 aaPredicted RBP10.9□□□□□ -0.66
SCN3B-203ENST00000527125 SLU7O95391 586 aaKnown RBP10.9□□□□□ -0.66
SCN3B-203ENST00000527125 CYP21A2P08686 494 aa10.9□□□□□ -0.66
SCN3B-203ENST00000527125 AMPHP49418 695 aa10.9□□□□□ -0.66
SCN3B-203ENST00000527125 RNF20Q5VTR2 975 aa10.9□□□□□ -0.66
SCN3B-203ENST00000527125 AACSQ86V21 672 aa10.9□□□□□ -0.66
SCN3B-203ENST00000527125 PPP1R13BQ96KQ4 1090 aa10.9□□□□□ -0.66
SCN3B-203ENST00000527125 CHMP4AQ9BY43 222 aa10.9□□□□□ -0.66
SCN3B-203ENST00000527125 FAM160A1Q05DH4 1040 aa10.9□□□□□ -0.67
SCN3B-203ENST00000527125 KRT32Q14532 448 aa10.9□□□□□ -0.67
SCN3B-203ENST00000527125 RABL6Q3YEC7 729 aaPredicted RBP10.9□□□□□ -0.67
SCN3B-203ENST00000527125 LINS1Q8NG48 757 aa10.9□□□□□ -0.67
SCN3B-203ENST00000527125 BICC1Q9H694 974 aaKnown RBP10.9□□□□□ -0.67
SCN3B-203ENST00000527125 CFAP45Q9UL16 551 aa10.9□□□□□ -0.67
SCN3B-203ENST00000527125 MAP3K2Q9Y2U5 619 aa10.9□□□□□ -0.67
SCN3B-203ENST00000527125 FAM237AA0A1B0GTK4 181 aa10.89□□□□□ -0.67
SCN3B-203ENST00000527125 NUTM2FA1L443 756 aa10.89□□□□□ -0.67
SCN3B-203ENST00000527125 PTPN14Q15678 1187 aa10.89□□□□□ -0.67
SCN3B-203ENST00000527125 ELF2Q15723 593 aa10.89□□□□□ -0.67
SCN3B-203ENST00000527125 AKAP4Q5JQC9 854 aa10.89□□□□□ -0.67
SCN3B-203ENST00000527125 NBPF6Q5VWK0 638 aa10.89□□□□□ -0.67
SCN3B-203ENST00000527125 NUTM2GQ5VZR2 741 aa10.89□□□□□ -0.67
SCN3B-203ENST00000527125 NFATC2IPQ8NCF5 419 aa10.89□□□□□ -0.67
SCN3B-203ENST00000527125 GPATCH3Q96I76 525 aa10.89□□□□□ -0.67
SCN3B-203ENST00000527125 NBPF4Q96M43 638 aa10.89□□□□□ -0.67
SCN3B-203ENST00000527125 TCEANC2Q96MN5 208 aa10.89□□□□□ -0.67
SCN3B-203ENST00000527125 COPRSQ9NQ92 184 aa10.89□□□□□ -0.67
SCN3B-203ENST00000527125 AKAP11Q9UKA4 1901 aa10.89□□□□□ -0.67
SCN3B-203ENST00000527125 SETD1BQ9UPS6 1966 aaKnown RBP10.89□□□□□ -0.67
SCN3B-203ENST00000527125 GRM8O00222 908 aa10.89□□□□□ -0.67
SCN3B-203ENST00000527125 FDPSP14324 419 aaKnown RBP10.89□□□□□ -0.67
SCN3B-203ENST00000527125 GSDMDP57764 484 aa10.89□□□□□ -0.67
SCN3B-203ENST00000527125 TMEM139Q8IV31 216 aa10.89□□□□□ -0.67
SCN3B-203ENST00000527125 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.89□□□□□ -0.67
SCN3B-203ENST00000527125 LRP6O75581 1613 aa10.89□□□□□ -0.67
SCN3B-203ENST00000527125 PHLPP2Q6ZVD8 1323 aa10.89□□□□□ -0.67
SCN3B-203ENST00000527125 TRHP20396 242 aaPredicted RBP10.89□□□□□ -0.67
SCN3B-203ENST00000527125 NEK1Q96PY6 1258 aa10.89□□□□□ -0.67
SCN3B-203ENST00000527125 USP28Q96RU2 1077 aa10.89□□□□□ -0.67
SCN3B-203ENST00000527125 RTEL1Q9NZ71 1219 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms