RNA–Protein interactions for RNA: ENST00000526606.1

AMBRA1-205, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 4

Gene AMBRA1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-205ENST00000526606 SULF1Q8IWU6 871 aa25.77■■□□□ 1.72
AMBRA1-205ENST00000526606 HTTP42858 3142 aa25.76■■□□□ 1.71
AMBRA1-205ENST00000526606 SF3B3Q15393 1217 aaKnown RBP25.76■■□□□ 1.71
AMBRA1-205ENST00000526606 NECTIN2Q92692 538 aa25.76■■□□□ 1.71
AMBRA1-205ENST00000526606 REM2Q8IYK8 340 aaPredicted RBP25.75■■□□□ 1.71
AMBRA1-205ENST00000526606 TBC1D16Q8TBP0 767 aa25.75■■□□□ 1.71
AMBRA1-205ENST00000526606 NEFMP07197 916 aa25.74■■□□□ 1.71
AMBRA1-205ENST00000526606 MOB2Q70IA6 237 aa25.74■■□□□ 1.71
AMBRA1-205ENST00000526606 ZNF296Q8WUU4 475 aaPredicted RBP25.74■■□□□ 1.71
AMBRA1-205ENST00000526606 TBC1D8O95759 1140 aa25.73■■□□□ 1.71
AMBRA1-205ENST00000526606 ZNF280AP59817 542 aaPredicted RBP25.73■■□□□ 1.71
AMBRA1-205ENST00000526606 SCARF1Q14162 830 aa25.73■■□□□ 1.71
AMBRA1-205ENST00000526606 PKN2Q16513 984 aaKnown RBP25.73■■□□□ 1.71
AMBRA1-205ENST00000526606 FAM89AQ96GI7 184 aa25.73■■□□□ 1.71
AMBRA1-205ENST00000526606 CENPFP49454 3210 aa25.73■■□□□ 1.71
AMBRA1-205ENST00000526606 ANGEL2Q5VTE6 544 aaKnown RBP25.72■■□□□ 1.71
AMBRA1-205ENST00000526606 ISCA1Q9BUE6 129 aa25.71■■□□□ 1.71
AMBRA1-205ENST00000526606 EYA3Q99504 573 aa25.7■■□□□ 1.7
AMBRA1-205ENST00000526606 SCAF8Q9UPN6 1271 aaKnown RBP25.7■■□□□ 1.7
AMBRA1-205ENST00000526606 FKBP1BP68106 108 aa25.69■■□□□ 1.7
AMBRA1-205ENST00000526606 GMLQ99445 158 aa25.69■■□□□ 1.7
AMBRA1-205ENST00000526606 HDAC9Q9UKV0 1011 aa25.69■■□□□ 1.7
AMBRA1-205ENST00000526606 RPS8P62241 208 aaKnown RBP25.68■■□□□ 1.7
AMBRA1-205ENST00000526606 KRT24Q2M2I5 525 aa25.68■■□□□ 1.7
AMBRA1-205ENST00000526606 BABAM1Q9NWV8 329 aa25.68■■□□□ 1.7
AMBRA1-205ENST00000526606 PODXL2Q9NZ53 605 aa25.68■■□□□ 1.7
AMBRA1-205ENST00000526606 PAPPA2Q9BXP8 1791 aa25.68■■□□□ 1.7
AMBRA1-205ENST00000526606 UBE2Q2LH0YL09 131 aa25.67■■□□□ 1.7
AMBRA1-205ENST00000526606 TM4SF4P48230 202 aa25.67■■□□□ 1.7
AMBRA1-205ENST00000526606 RSBN1LQ6PCB5 846 aaPredicted RBP25.67■■□□□ 1.7
AMBRA1-205ENST00000526606 ZC3H12CQ9C0D7 883 aaKnown RBP25.67■■□□□ 1.7
AMBRA1-205ENST00000526606 ZNF609O15014 1411 aa25.66■■□□□ 1.7
AMBRA1-205ENST00000526606 BRCA2P51587 3418 aa25.66■■□□□ 1.7
AMBRA1-205ENST00000526606 ATP5J2-PTCD1G3V325 749 aa25.66■■□□□ 1.7
AMBRA1-205ENST00000526606 GPR25O00155 361 aa25.66■■□□□ 1.7
AMBRA1-205ENST00000526606 RTL5Q5HYW3 569 aaPredicted RBP25.66■■□□□ 1.7
AMBRA1-205ENST00000526606 R3HDMLQ9H3Y0 253 aa25.66■■□□□ 1.7
AMBRA1-205ENST00000526606 PRAMEF18Q5VWM3 479 aa25.65■■□□□ 1.7
AMBRA1-205ENST00000526606 AGBL3Q8NEM8 1001 aa25.65■■□□□ 1.7
AMBRA1-205ENST00000526606 PLBD2Q8NHP8 589 aa25.65■■□□□ 1.7
AMBRA1-205ENST00000526606 RIPK4P57078 832 aa25.64■■□□□ 1.7
AMBRA1-205ENST00000526606 NOM1Q5C9Z4 860 aaKnown RBP25.64■■□□□ 1.7
AMBRA1-205ENST00000526606 FBXO46Q6PJ61 603 aaPredicted RBP25.64■■□□□ 1.7
AMBRA1-205ENST00000526606 SEC31BQ9NQW1 1179 aa25.64■■□□□ 1.7
AMBRA1-205ENST00000526606 CHPF2Q9P2E5 772 aa25.64■■□□□ 1.7
AMBRA1-205ENST00000526606 ANKRD13DQ6ZTN6 518 aa25.63■■□□□ 1.69
AMBRA1-205ENST00000526606 MYOZ2Q9NPC6 264 aa25.63■■□□□ 1.69
AMBRA1-205ENST00000526606 PITPNM2Q9BZ72 1349 aa25.63■■□□□ 1.69
AMBRA1-205ENST00000526606 MAPK8IP3Q9UPT6 1336 aa25.63■■□□□ 1.69
AMBRA1-205ENST00000526606 IRS4O14654 1257 aaPredicted RBP25.62■■□□□ 1.69
AMBRA1-205ENST00000526606 PSME4Q14997 1843 aa25.61■■□□□ 1.69
AMBRA1-205ENST00000526606 UFL1O94874 794 aa25.61■■□□□ 1.69
AMBRA1-205ENST00000526606 USP17L8P0C7I0 530 aa25.61■■□□□ 1.69
AMBRA1-205ENST00000526606 HABP4Q5JVS0 413 aaKnown RBP25.6■■□□□ 1.69
AMBRA1-205ENST00000526606 PNNQ9H307 717 aaKnown RBP25.6■■□□□ 1.69
AMBRA1-205ENST00000526606 TRIM28Q13263 835 aaKnown RBP25.59■■□□□ 1.69
AMBRA1-205ENST00000526606 NBPF9Q3BBW0 867 aa25.59■■□□□ 1.69
AMBRA1-205ENST00000526606 GCC1Q96CN9 775 aa25.59■■□□□ 1.69
AMBRA1-205ENST00000526606 CFHR5Q9BXR6 569 aa25.59■■□□□ 1.69
AMBRA1-205ENST00000526606 GGA1Q9UJY5 639 aa25.59■■□□□ 1.69
AMBRA1-205ENST00000526606 WTIPA6NIX2 430 aaPredicted RBP25.58■■□□□ 1.69
AMBRA1-205ENST00000526606 CHL1O00533 1208 aa25.58■■□□□ 1.69
AMBRA1-205ENST00000526606 MKRN3Q13064 507 aaKnown RBP25.58■■□□□ 1.69
AMBRA1-205ENST00000526606 ANKIB1Q9P2G1 1089 aa25.58■■□□□ 1.69
AMBRA1-205ENST00000526606 G3V3G9 751 aa25.57■■□□□ 1.68
AMBRA1-205ENST00000526606 TMPOP42166 694 aaKnown RBP25.57■■□□□ 1.68
AMBRA1-205ENST00000526606 DCAF8Q5TAQ9 597 aa25.57■■□□□ 1.68
AMBRA1-205ENST00000526606 FKTNO75072 461 aa25.56■■□□□ 1.68
AMBRA1-205ENST00000526606 USP17L3A6NCW0 530 aa25.55■■□□□ 1.68
AMBRA1-205ENST00000526606 USP17L4A6NCW7 530 aa25.55■■□□□ 1.68
AMBRA1-205ENST00000526606 PTPN12Q05209 780 aaKnown RBP25.55■■□□□ 1.68
AMBRA1-205ENST00000526606 USP17L1Q7RTZ2 530 aa25.55■■□□□ 1.68
AMBRA1-205ENST00000526606 POTEFA5A3E0 1075 aa25.54■■□□□ 1.68
AMBRA1-205ENST00000526606 MXD3Q9BW11 206 aa25.54■■□□□ 1.68
AMBRA1-205ENST00000526606 HDGFL1Q5TGJ6 251 aa25.53■■□□□ 1.68
AMBRA1-205ENST00000526606 PODNQ7Z5L7 613 aa25.53■■□□□ 1.68
AMBRA1-205ENST00000526606 ZBTB38Q8NAP3 1195 aaPredicted RBP25.53■■□□□ 1.68
AMBRA1-205ENST00000526606 TTLL12Q14166 644 aaPredicted RBP25.52■■□□□ 1.68
AMBRA1-205ENST00000526606 DBF4Q9UBU7 674 aaPredicted RBP25.52■■□□□ 1.68
AMBRA1-205ENST00000526606 WNT10BO00744 389 aa25.51■■□□□ 1.67
AMBRA1-205ENST00000526606 ZNF646O15015 1829 aaPredicted RBP25.51■■□□□ 1.67
AMBRA1-205ENST00000526606 SZT2Q5T011 3432 aa25.5■■□□□ 1.67
AMBRA1-205ENST00000526606 SREBF2Q12772 1141 aa25.5■■□□□ 1.67
AMBRA1-205ENST00000526606 DACT2Q5SW24 774 aa25.5■■□□□ 1.67
AMBRA1-205ENST00000526606 LDLRAD1Q5T700 205 aa25.5■■□□□ 1.67
AMBRA1-205ENST00000526606 XDHP47989 1333 aa25.49■■□□□ 1.67
AMBRA1-205ENST00000526606 JARID2Q92833 1246 aaPredicted RBP25.49■■□□□ 1.67
AMBRA1-205ENST00000526606 CCDC85AQ96PX6 553 aaPredicted RBP25.49■■□□□ 1.67
AMBRA1-205ENST00000526606 KIAA0100Q14667 2235 aaKnown RBP25.49■■□□□ 1.67
AMBRA1-205ENST00000526606 LMOD3Q0VAK6 560 aa25.48■■□□□ 1.67
AMBRA1-205ENST00000526606 SPRYD7Q5W111 196 aa25.48■■□□□ 1.67
AMBRA1-205ENST00000526606 HYPKQ9NX55 129 aa25.48■■□□□ 1.67
AMBRA1-205ENST00000526606 TRIM35Q9UPQ4 493 aa25.48■■□□□ 1.67
AMBRA1-205ENST00000526606 HOXB7P09629 217 aa25.47■■□□□ 1.67
AMBRA1-205ENST00000526606 ATP2B4P23634 1241 aa25.47■■□□□ 1.67
AMBRA1-205ENST00000526606 PRKG1Q13976 671 aa25.47■■□□□ 1.67
AMBRA1-205ENST00000526606 OTOP1Q7RTM1 612 aa25.47■■□□□ 1.67
AMBRA1-205ENST00000526606 FZD1Q9UP38 647 aa25.47■■□□□ 1.67
AMBRA1-205ENST00000526606 LAS1LQ9Y4W2 734 aaKnown RBP25.47■■□□□ 1.67
AMBRA1-205ENST00000526606 FXR1P51114 621 aaKnown RBP eCLIP25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms