RNA–Protein interactions for RNA: ENST00000526265.5

CCDC90B-206, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,433 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-206ENST00000526265 YTHDC1Q96MU7 727 aaKnown RBP13.12□□□□□ -0.31
CCDC90B-206ENST00000526265 CDCA7Q9BWT1 371 aaPredicted RBP13.12□□□□□ -0.31
CCDC90B-206ENST00000526265 PALM3A6NDB9 673 aaPredicted RBP13.11□□□□□ -0.31
CCDC90B-206ENST00000526265 TATP17735 454 aaPredicted RBP13.11□□□□□ -0.31
CCDC90B-206ENST00000526265 PLEKHO1Q53GL0 409 aaPredicted RBP13.11□□□□□ -0.31
CCDC90B-206ENST00000526265 LARP1Q6PKG0 1096 aaKnown RBP13.11□□□□□ -0.31
CCDC90B-206ENST00000526265 VASH1Q7L8A9 365 aaPredicted RBP13.11□□□□□ -0.31
CCDC90B-206ENST00000526265 CCDC125Q86Z20 511 aa13.11□□□□□ -0.31
CCDC90B-206ENST00000526265 RNF135Q8IUD6 432 aa13.11□□□□□ -0.31
CCDC90B-206ENST00000526265 KCTD15Q96SI1 283 aaPredicted RBP13.11□□□□□ -0.31
CCDC90B-206ENST00000526265 ATP9BO43861 1147 aa13.1□□□□□ -0.31
CCDC90B-206ENST00000526265 TMPOP42166 694 aaKnown RBP13.1□□□□□ -0.31
CCDC90B-206ENST00000526265 NFE2L2Q16236 605 aa13.1□□□□□ -0.31
CCDC90B-206ENST00000526265 TBC1D9Q6ZT07 1266 aa13.1□□□□□ -0.31
CCDC90B-206ENST00000526265 USHBP1Q8N6Y0 703 aa13.1□□□□□ -0.31
CCDC90B-206ENST00000526265 PKD2L1Q9P0L9 805 aa13.1□□□□□ -0.31
CCDC90B-206ENST00000526265 TFIP11Q9UBB9 837 aaKnown RBP13.1□□□□□ -0.31
CCDC90B-206ENST00000526265 USP21Q9UK80 565 aa13.1□□□□□ -0.31
CCDC90B-206ENST00000526265 BCL9LQ86UU0 1499 aa13.09□□□□□ -0.31
CCDC90B-206ENST00000526265 PIK3CDO00329 1044 aa13.09□□□□□ -0.31
CCDC90B-206ENST00000526265 HTATSF1O43719 755 aaKnown RBP13.09□□□□□ -0.31
CCDC90B-206ENST00000526265 GIGYF1O75420 1035 aaPredicted RBP13.09□□□□□ -0.31
CCDC90B-206ENST00000526265 IL2RBP14784 551 aa13.09□□□□□ -0.31
CCDC90B-206ENST00000526265 PDE3BQ13370 1112 aa13.09□□□□□ -0.31
CCDC90B-206ENST00000526265 VPS72Q15906 364 aa13.09□□□□□ -0.31
CCDC90B-206ENST00000526265 SPG7Q9UQ90 795 aa13.09□□□□□ -0.31
CCDC90B-206ENST00000526265 RIPK4P57078 832 aa13.08□□□□□ -0.32
CCDC90B-206ENST00000526265 CALD1Q05682 793 aaKnown RBP13.08□□□□□ -0.32
CCDC90B-206ENST00000526265 PHACTR3Q96KR7 559 aa13.08□□□□□ -0.32
CCDC90B-206ENST00000526265 TLL2Q9Y6L7 1015 aa13.08□□□□□ -0.32
CCDC90B-206ENST00000526265 SPATA31A1Q5TZJ5 1347 aa13.08□□□□□ -0.32
CCDC90B-206ENST00000526265 SPATA31A5Q5VU36 1347 aa13.08□□□□□ -0.32
CCDC90B-206ENST00000526265 SPATA31A7Q8IWB4 1347 aa13.08□□□□□ -0.32
CCDC90B-206ENST00000526265 DLG5Q8TDM6 1919 aa13.07□□□□□ -0.32
CCDC90B-206ENST00000526265 FOXC1Q12948 553 aa13.07□□□□□ -0.32
CCDC90B-206ENST00000526265 ARID5BQ14865 1188 aa13.07□□□□□ -0.32
CCDC90B-206ENST00000526265 MAFBQ9Y5Q3 323 aaPredicted RBP13.07□□□□□ -0.32
CCDC90B-206ENST00000526265 WNK3Q9BYP7 1800 aa13.07□□□□□ -0.32
CCDC90B-206ENST00000526265 AFF2P51816 1311 aa13.07□□□□□ -0.32
CCDC90B-206ENST00000526265 PKD1L3Q7Z443 1732 aa13.07□□□□□ -0.32
CCDC90B-206ENST00000526265 OVOS2A0A0G2JMS6 1433 aa13.07□□□□□ -0.32
CCDC90B-206ENST00000526265 SKIP12755 728 aa13.06□□□□□ -0.32
CCDC90B-206ENST00000526265 MTHFSDQ2M296 383 aaKnown RBP13.06□□□□□ -0.32
CCDC90B-206ENST00000526265 MAP7D1Q3KQU3 841 aa13.06□□□□□ -0.32
CCDC90B-206ENST00000526265 WDR63Q8IWG1 891 aa13.06□□□□□ -0.32
CCDC90B-206ENST00000526265 RTF1Q92541 710 aaKnown RBP13.06□□□□□ -0.32
CCDC90B-206ENST00000526265 TRPC5Q9UL62 973 aaPredicted RBP13.06□□□□□ -0.32
CCDC90B-206ENST00000526265 CCDC9Q9Y3X0 531 aaKnown RBP13.06□□□□□ -0.32
CCDC90B-206ENST00000526265 GNAT3A8MTJ3 354 aa13.05□□□□□ -0.32
CCDC90B-206ENST00000526265 GDF9O60383 454 aa13.05□□□□□ -0.32
CCDC90B-206ENST00000526265 ADH1CP00326 375 aa13.05□□□□□ -0.32
CCDC90B-206ENST00000526265 AKAP4Q5JQC9 854 aa13.05□□□□□ -0.32
CCDC90B-206ENST00000526265 C1orf141Q5JVX7 400 aa13.05□□□□□ -0.32
CCDC90B-206ENST00000526265 ZNF772Q68DY9 489 aaPredicted RBP13.05□□□□□ -0.32
CCDC90B-206ENST00000526265 MEGF6O75095 1541 aa13.05□□□□□ -0.32
CCDC90B-206ENST00000526265 USP17L5A8MUK1 530 aa13.05□□□□□ -0.32
CCDC90B-206ENST00000526265 HSP90AB1P08238 724 aaKnown RBP13.05□□□□□ -0.32
CCDC90B-206ENST00000526265 INTS6LQ5JSJ4 861 aaKnown RBP13.05□□□□□ -0.32
CCDC90B-206ENST00000526265 PLEKHM2Q8IWE5 1019 aa13.05□□□□□ -0.32
CCDC90B-206ENST00000526265 PLPP7Q8NBV4 271 aa13.05□□□□□ -0.32
CCDC90B-206ENST00000526265 USP35Q9P2H5 1018 aa13.05□□□□□ -0.32
CCDC90B-206ENST00000526265 LZTS3O60299 673 aaPredicted RBP13.04□□□□□ -0.32
CCDC90B-206ENST00000526265 CENPBP07199 599 aaPredicted RBP13.04□□□□□ -0.32
CCDC90B-206ENST00000526265 GRM5P41594 1212 aa13.04□□□□□ -0.32
CCDC90B-206ENST00000526265 NR5A1Q13285 461 aa13.04□□□□□ -0.32
CCDC90B-206ENST00000526265 IFNL2Q8IZJ0 200 aa13.04□□□□□ -0.32
CCDC90B-206ENST00000526265 ZCRB1Q8TBF4 217 aaKnown RBP13.04□□□□□ -0.32
CCDC90B-206ENST00000526265 RRP7AQ9Y3A4 280 aaKnown RBP13.04□□□□□ -0.32
CCDC90B-206ENST00000526265 IL16Q14005 1332 aa13.04□□□□□ -0.32
CCDC90B-206ENST00000526265 ZNF521Q96K83 1311 aa13.04□□□□□ -0.32
CCDC90B-206ENST00000526265 PCDH11XQ9BZA7 1347 aa13.04□□□□□ -0.32
CCDC90B-206ENST00000526265 PCDH11YQ9BZA8 1340 aa13.04□□□□□ -0.32
CCDC90B-206ENST00000526265 MAP3K5Q99683 1374 aa13.03□□□□□ -0.32
CCDC90B-206ENST00000526265 DISP2A7MBM2 1401 aa13.03□□□□□ -0.32
CCDC90B-206ENST00000526265 EXOC5O00471 708 aa13.03□□□□□ -0.32
CCDC90B-206ENST00000526265 FSHRP23945 695 aa13.03□□□□□ -0.32
CCDC90B-206ENST00000526265 LMOD1P29536 600 aaPredicted RBP13.03□□□□□ -0.32
CCDC90B-206ENST00000526265 PRR20EP86478 221 aa13.03□□□□□ -0.32
CCDC90B-206ENST00000526265 PRR20CP86479 221 aa13.03□□□□□ -0.32
CCDC90B-206ENST00000526265 PRR20DP86480 221 aa13.03□□□□□ -0.32
CCDC90B-206ENST00000526265 PRR20BP86481 221 aa13.03□□□□□ -0.32
CCDC90B-206ENST00000526265 PRR20AP86496 221 aa13.03□□□□□ -0.32
CCDC90B-206ENST00000526265 ZNF530Q6P9A1 599 aaPredicted RBP13.03□□□□□ -0.32
CCDC90B-206ENST00000526265 SNIP1Q8TAD8 396 aaKnown RBP13.03□□□□□ -0.32
CCDC90B-206ENST00000526265 CCDC85AQ96PX6 553 aaPredicted RBP13.03□□□□□ -0.32
CCDC90B-206ENST00000526265 ATRNO75882 1429 aa13.03□□□□□ -0.32
CCDC90B-206ENST00000526265 USP17L3A6NCW0 530 aa13.02□□□□□ -0.33
CCDC90B-206ENST00000526265 USP17L4A6NCW7 530 aa13.02□□□□□ -0.33
CCDC90B-206ENST00000526265 USP17L2Q6R6M4 530 aa13.02□□□□□ -0.33
CCDC90B-206ENST00000526265 USP17L1Q7RTZ2 530 aa13.02□□□□□ -0.33
CCDC90B-206ENST00000526265 DOLKQ9UPQ8 538 aa13.02□□□□□ -0.33
CCDC90B-206ENST00000526265 E9PSI1 815 aa13.01□□□□□ -0.33
CCDC90B-206ENST00000526265 DHX9Q08211 1270 aaKnown RBP13.01□□□□□ -0.33
CCDC90B-206ENST00000526265 TRAF7Q6Q0C0 670 aa13.01□□□□□ -0.33
CCDC90B-206ENST00000526265 VIRMAQ69YN4 1812 aaKnown RBP13□□□□□ -0.33
CCDC90B-206ENST00000526265 ALDH1A1P00352 501 aa13□□□□□ -0.33
CCDC90B-206ENST00000526265 PHKG2P15735 406 aa13□□□□□ -0.33
CCDC90B-206ENST00000526265 DDB1Q16531 1140 aa13□□□□□ -0.33
CCDC90B-206ENST00000526265 PBXIP1Q96AQ6 731 aa13□□□□□ -0.33
CCDC90B-206ENST00000526265 QTRT2Q9H974 415 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms