RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 PSMD14O00487 310 aa15.45■□□□□ 0.06
SSBP3-210ENST00000525990 ECE2O60344 883 aa15.45■□□□□ 0.06
SSBP3-210ENST00000525990 HIRAP54198 1017 aaPredicted RBP15.45■□□□□ 0.06
SSBP3-210ENST00000525990 FKBP5Q13451 457 aaPredicted RBP15.45■□□□□ 0.06
SSBP3-210ENST00000525990 TTLL11Q8NHH1 800 aa15.45■□□□□ 0.06
SSBP3-210ENST00000525990 GREM2Q9H772 168 aa15.45■□□□□ 0.06
SSBP3-210ENST00000525990 TMEM88BA6NKF7 163 aa15.44■□□□□ 0.06
SSBP3-210ENST00000525990 UFL1O94874 794 aa15.44■□□□□ 0.06
SSBP3-210ENST00000525990 HSPA1AP0DMV8 641 aaKnown RBP15.44■□□□□ 0.06
SSBP3-210ENST00000525990 HSPA1BP0DMV9 641 aaKnown RBP15.44■□□□□ 0.06
SSBP3-210ENST00000525990 NEXNQ0ZGT2 675 aa15.44■□□□□ 0.06
SSBP3-210ENST00000525990 USP50Q70EL3 339 aaPredicted RBP15.44■□□□□ 0.06
SSBP3-210ENST00000525990 DNAAF4Q8WXU2 420 aa15.44■□□□□ 0.06
SSBP3-210ENST00000525990 BCL2L13Q9BXK5 485 aa15.44■□□□□ 0.06
SSBP3-210ENST00000525990 CHMP4AQ9BY43 222 aa15.44■□□□□ 0.06
SSBP3-210ENST00000525990 ADARB2Q9NS39 739 aaKnown RBP15.44■□□□□ 0.06
SSBP3-210ENST00000525990 H7C1W4 665 aa15.43■□□□□ 0.06
SSBP3-210ENST00000525990 EGFRP00533 1210 aa15.43■□□□□ 0.06
SSBP3-210ENST00000525990 CASP7P55210 303 aa15.43■□□□□ 0.06
SSBP3-210ENST00000525990 GCKRQ14397 625 aa15.43■□□□□ 0.06
SSBP3-210ENST00000525990 COL13A1Q5TAT6 717 aaPredicted RBP15.43■□□□□ 0.06
SSBP3-210ENST00000525990 ANKRD18AQ8IVF6 992 aa15.43■□□□□ 0.06
SSBP3-210ENST00000525990 PODXL2Q9NZ53 605 aa15.43■□□□□ 0.06
SSBP3-210ENST00000525990 ANKIB1Q9P2G1 1089 aa15.43■□□□□ 0.06
SSBP3-210ENST00000525990 THSD7BQ9C0I4 1608 aa15.43■□□□□ 0.06
SSBP3-210ENST00000525990 ZNF521Q96K83 1311 aa15.43■□□□□ 0.06
SSBP3-210ENST00000525990 VEGFBP49765 207 aa15.42■□□□□ 0.06
SSBP3-210ENST00000525990 TNIP1Q15025 636 aa15.42■□□□□ 0.06
SSBP3-210ENST00000525990 IFFO2Q5TF58 517 aa15.42■□□□□ 0.06
SSBP3-210ENST00000525990 DLK2Q6UY11 383 aa15.42■□□□□ 0.06
SSBP3-210ENST00000525990 MICALL2Q8IY33 904 aa15.42■□□□□ 0.06
SSBP3-210ENST00000525990 CNOT7Q9UIV1 285 aaKnown RBP15.42■□□□□ 0.06
SSBP3-210ENST00000525990 HSP90B1P14625 803 aaKnown RBP15.41■□□□□ 0.06
SSBP3-210ENST00000525990 FAM161AQ3B820 660 aa15.41■□□□□ 0.06
SSBP3-210ENST00000525990 CST9Q5W186 159 aa15.41■□□□□ 0.06
SSBP3-210ENST00000525990 SAMD7Q7Z3H4 446 aa15.41■□□□□ 0.06
SSBP3-210ENST00000525990 EYA3Q99504 573 aa15.41■□□□□ 0.06
SSBP3-210ENST00000525990 GLIS2Q9BZE0 524 aaPredicted RBP15.41■□□□□ 0.06
SSBP3-210ENST00000525990 GGA1Q9UJY5 639 aa15.41■□□□□ 0.06
SSBP3-210ENST00000525990 LINS1Q8NG48 757 aa15.4■□□□□ 0.06
SSBP3-210ENST00000525990 XDHP47989 1333 aa15.4■□□□□ 0.06
SSBP3-210ENST00000525990 TBC1D10BQ4KMP7 808 aaPredicted RBP15.39■□□□□ 0.05
SSBP3-210ENST00000525990 CDC5LQ99459 802 aaKnown RBP15.39■□□□□ 0.05
SSBP3-210ENST00000525990 ZC3H12CQ9C0D7 883 aaKnown RBP15.39■□□□□ 0.05
SSBP3-210ENST00000525990 MYH16Q9H6N6 1097 aa15.39■□□□□ 0.05
SSBP3-210ENST00000525990 ABT1Q9ULW3 272 aaKnown RBP15.39■□□□□ 0.05
SSBP3-210ENST00000525990 MINPP1Q9UNW1 487 aa15.39■□□□□ 0.05
SSBP3-210ENST00000525990 RASSF10A6NK89 507 aa15.38■□□□□ 0.05
SSBP3-210ENST00000525990 ITGA6P23229 1130 aa15.38■□□□□ 0.05
SSBP3-210ENST00000525990 KLRK1P26718 216 aa15.38■□□□□ 0.05
SSBP3-210ENST00000525990 BEND3Q5T5X7 828 aa15.38■□□□□ 0.05
SSBP3-210ENST00000525990 PLA2G12BQ9BX93 195 aa15.38■□□□□ 0.05
SSBP3-210ENST00000525990 PGAP2Q9UHJ9 254 aa15.38■□□□□ 0.05
SSBP3-210ENST00000525990 ASTN2O75129 1339 aaPredicted RBP15.38■□□□□ 0.05
SSBP3-210ENST00000525990 EPHA10Q5JZY3 1008 aa15.37■□□□□ 0.05
SSBP3-210ENST00000525990 RBM26Q5T8P6 1007 aaKnown RBP15.37■□□□□ 0.05
SSBP3-210ENST00000525990 TXNRD3Q86VQ6 643 aa15.37■□□□□ 0.05
SSBP3-210ENST00000525990 DPF2Q92785 391 aa15.37■□□□□ 0.05
SSBP3-210ENST00000525990 BSDC1Q9NW68 430 aaPredicted RBP15.37■□□□□ 0.05
SSBP3-210ENST00000525990 G3V3G9 751 aa15.36■□□□□ 0.05
SSBP3-210ENST00000525990 H7C1D1 291 aa15.36■□□□□ 0.05
SSBP3-210ENST00000525990 SNAP23O00161 211 aa15.36■□□□□ 0.05
SSBP3-210ENST00000525990 FOXN1O15353 648 aa15.36■□□□□ 0.05
SSBP3-210ENST00000525990 CSF1RP07333 972 aa15.36■□□□□ 0.05
SSBP3-210ENST00000525990 VIL1P09327 827 aaKnown RBP15.36■□□□□ 0.05
SSBP3-210ENST00000525990 ATP2B4P23634 1241 aa15.36■□□□□ 0.05
SSBP3-210ENST00000525990 FOXO4P98177 505 aa15.36■□□□□ 0.05
SSBP3-210ENST00000525990 DEFB115Q30KQ5 88 aa15.36■□□□□ 0.05
SSBP3-210ENST00000525990 DCAF8Q5TAQ9 597 aa15.36■□□□□ 0.05
SSBP3-210ENST00000525990 MXD3Q9BW11 206 aa15.36■□□□□ 0.05
SSBP3-210ENST00000525990 ZNF408Q9H9D4 720 aa15.36■□□□□ 0.05
SSBP3-210ENST00000525990 MED23Q9ULK4 1368 aa15.36■□□□□ 0.05
SSBP3-210ENST00000525990 CELF2O95319 508 aaKnown RBP15.35■□□□□ 0.05
SSBP3-210ENST00000525990 CCT4P50991 539 aaKnown RBP15.35■□□□□ 0.05
SSBP3-210ENST00000525990 GRM1Q13255 1194 aa15.35■□□□□ 0.05
SSBP3-210ENST00000525990 CYP4F22Q6NT55 531 aa15.35■□□□□ 0.05
SSBP3-210ENST00000525990 USP48Q86UV5 1035 aa15.35■□□□□ 0.05
SSBP3-210ENST00000525990 WDR33Q9C0J8 1336 aaKnown RBP15.35■□□□□ 0.05
SSBP3-210ENST00000525990 ADM5C9JUS6 153 aa15.34■□□□□ 0.05
SSBP3-210ENST00000525990 RPS12P25398 132 aaKnown RBP15.34■□□□□ 0.05
SSBP3-210ENST00000525990 KIF4BQ2VIQ3 1234 aa15.34■□□□□ 0.05
SSBP3-210ENST00000525990 SLC4A10Q6U841 1118 aa15.34■□□□□ 0.05
SSBP3-210ENST00000525990 PAXIP1Q6ZW49 1069 aaPredicted RBP15.34■□□□□ 0.05
SSBP3-210ENST00000525990 CDCA7LQ96GN5 454 aa15.34■□□□□ 0.05
SSBP3-210ENST00000525990 TLL2Q9Y6L7 1015 aa15.34■□□□□ 0.05
SSBP3-210ENST00000525990 IGHMBP2P38935 993 aaKnown RBP15.33■□□□□ 0.04
SSBP3-210ENST00000525990 RSBN1LQ6PCB5 846 aaPredicted RBP15.33■□□□□ 0.04
SSBP3-210ENST00000525990 HELBQ8NG08 1087 aaPredicted RBP15.33■□□□□ 0.04
SSBP3-210ENST00000525990 ZC3H15Q8WU90 426 aaKnown RBP15.33■□□□□ 0.04
SSBP3-210ENST00000525990 ZNF594Q96JF6 807 aaPredicted RBP15.33■□□□□ 0.04
SSBP3-210ENST00000525990 CAPNS2Q96L46 248 aa15.33■□□□□ 0.04
SSBP3-210ENST00000525990 GMLQ99445 158 aa15.33■□□□□ 0.04
SSBP3-210ENST00000525990 SCAF8Q9UPN6 1271 aaKnown RBP15.33■□□□□ 0.04
SSBP3-210ENST00000525990 CHMP3Q9Y3E7 222 aa15.33■□□□□ 0.04
SSBP3-210ENST00000525990 ZNF609O15014 1411 aa15.33■□□□□ 0.04
SSBP3-210ENST00000525990 GRM8O00222 908 aa15.32■□□□□ 0.04
SSBP3-210ENST00000525990 TAF5LO75529 589 aa15.32■□□□□ 0.04
SSBP3-210ENST00000525990 CHRNDQ07001 517 aa15.32■□□□□ 0.04
SSBP3-210ENST00000525990 LMBR1LQ6UX01 489 aa15.32■□□□□ 0.04
SSBP3-210ENST00000525990 MRPL50Q8N5N7 158 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms