RNA–Protein interactions for RNA: ENST00000525669.5

PABPC4-220, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-220ENST00000525669 NDUFB9Q9Y6M9 179 aa10.69□□□□□ -0.7
PABPC4-220ENST00000525669 MYO5AQ9Y4I1 1855 aaKnown RBP10.69□□□□□ -0.7
PABPC4-220ENST00000525669 NRXN2Q9P2S2 1712 aa10.69□□□□□ -0.7
PABPC4-220ENST00000525669 A0A1B0GUL7 405 aa10.68□□□□□ -0.7
PABPC4-220ENST00000525669 ERC2O15083 957 aa10.68□□□□□ -0.7
PABPC4-220ENST00000525669 GLRX3O76003 335 aaKnown RBP10.68□□□□□ -0.7
PABPC4-220ENST00000525669 SERPINB2P05120 415 aa10.68□□□□□ -0.7
PABPC4-220ENST00000525669 HSP90B1P14625 803 aaKnown RBP10.68□□□□□ -0.7
PABPC4-220ENST00000525669 TM4SF1P30408 202 aa10.68□□□□□ -0.7
PABPC4-220ENST00000525669 DDR1Q08345 913 aa10.68□□□□□ -0.7
PABPC4-220ENST00000525669 MSL1Q68DK7 614 aa10.68□□□□□ -0.7
PABPC4-220ENST00000525669 CNBD1Q8NA66 436 aa10.68□□□□□ -0.7
PABPC4-220ENST00000525669 EP400Q96L91 3159 aa10.67□□□□□ -0.7
PABPC4-220ENST00000525669 RTL9Q8NET4 1388 aa10.67□□□□□ -0.7
PABPC4-220ENST00000525669 TAF5LO75529 589 aa10.67□□□□□ -0.7
PABPC4-220ENST00000525669 IGHMBP2P38935 993 aaKnown RBP10.67□□□□□ -0.7
PABPC4-220ENST00000525669 SF3B2Q13435 895 aaKnown RBP10.67□□□□□ -0.7
PABPC4-220ENST00000525669 SF3B3Q15393 1217 aaKnown RBP10.67□□□□□ -0.7
PABPC4-220ENST00000525669 PRR5LQ6MZQ0 368 aa10.67□□□□□ -0.7
PABPC4-220ENST00000525669 CNTROBQ8N137 903 aa10.67□□□□□ -0.7
PABPC4-220ENST00000525669 EDC3Q96F86 508 aaKnown RBP10.67□□□□□ -0.7
PABPC4-220ENST00000525669 NLRP3Q96P20 1036 aa10.67□□□□□ -0.7
PABPC4-220ENST00000525669 MPHOSPH8Q99549 860 aa10.67□□□□□ -0.7
PABPC4-220ENST00000525669 GPR108Q9NPR9 543 aa10.67□□□□□ -0.7
PABPC4-220ENST00000525669 FBXO3Q9UK99 471 aa10.67□□□□□ -0.7
PABPC4-220ENST00000525669 COL11A2P13942 1736 aaPredicted RBP10.67□□□□□ -0.7
PABPC4-220ENST00000525669 MYH7P12883 1935 aa10.66□□□□□ -0.7
PABPC4-220ENST00000525669 AKAP11Q9UKA4 1901 aa10.66□□□□□ -0.7
PABPC4-220ENST00000525669 SNAP23O00161 211 aa10.66□□□□□ -0.7
PABPC4-220ENST00000525669 POLRMTO00411 1230 aaKnown RBP10.66□□□□□ -0.7
PABPC4-220ENST00000525669 ATP5JP18859 108 aa10.66□□□□□ -0.7
PABPC4-220ENST00000525669 CHMLP26374 656 aa10.66□□□□□ -0.7
PABPC4-220ENST00000525669 ANP32AP39687 249 aaKnown RBP10.66□□□□□ -0.7
PABPC4-220ENST00000525669 BAG6P46379 1132 aa10.66□□□□□ -0.7
PABPC4-220ENST00000525669 ATP2B3Q16720 1220 aa10.66□□□□□ -0.7
PABPC4-220ENST00000525669 CASC1Q6TDU7 716 aa10.66□□□□□ -0.7
PABPC4-220ENST00000525669 SLC51AQ86UW1 340 aa10.66□□□□□ -0.7
PABPC4-220ENST00000525669 ANKRD18AQ8IVF6 992 aa10.66□□□□□ -0.7
PABPC4-220ENST00000525669 VGLL2Q8N8G2 317 aa10.66□□□□□ -0.7
PABPC4-220ENST00000525669 CELF1Q92879 486 aaKnown RBP10.66□□□□□ -0.7
PABPC4-220ENST00000525669 XAGE2Q96GT9 111 aa10.66□□□□□ -0.7
PABPC4-220ENST00000525669 DNAJC2Q99543 621 aaKnown RBP10.66□□□□□ -0.7
PABPC4-220ENST00000525669 UPF2Q9HAU5 1272 aaKnown RBP10.66□□□□□ -0.7
PABPC4-220ENST00000525669 STK32BQ9NY57 414 aa10.66□□□□□ -0.7
PABPC4-220ENST00000525669 AKAP2Q9Y2D5 859 aa10.66□□□□□ -0.7
PABPC4-220ENST00000525669 MYH13Q9UKX3 1938 aa10.66□□□□□ -0.7
PABPC4-220ENST00000525669 MROH5Q6ZUA9 1318 aa10.65□□□□□ -0.7
PABPC4-220ENST00000525669 PDE8BO95263 885 aa10.65□□□□□ -0.7
PABPC4-220ENST00000525669 SLC15A2Q16348 729 aa10.65□□□□□ -0.7
PABPC4-220ENST00000525669 GORABQ5T7V8 394 aa10.65□□□□□ -0.7
PABPC4-220ENST00000525669 TBC1D32Q96NH3 1257 aa10.65□□□□□ -0.7
PABPC4-220ENST00000525669 CDC5LQ99459 802 aaKnown RBP10.65□□□□□ -0.7
PABPC4-220ENST00000525669 C22orf23Q9BZE7 217 aa10.65□□□□□ -0.7
PABPC4-220ENST00000525669 WTIPA6NIX2 430 aaPredicted RBP10.64□□□□□ -0.71
PABPC4-220ENST00000525669 HMGB2P26583 209 aaKnown RBP10.64□□□□□ -0.71
PABPC4-220ENST00000525669 ST5P78524 1137 aa10.64□□□□□ -0.71
PABPC4-220ENST00000525669 CHRNDQ07001 517 aa10.64□□□□□ -0.71
PABPC4-220ENST00000525669 TTC39AQ5SRH9 613 aa10.64□□□□□ -0.71
PABPC4-220ENST00000525669 FLAD1Q8NFF5 587 aa10.64□□□□□ -0.71
PABPC4-220ENST00000525669 EVI5LQ96CN4 794 aa10.64□□□□□ -0.71
PABPC4-220ENST00000525669 ESYT1Q9BSJ8 1104 aa10.64□□□□□ -0.71
PABPC4-220ENST00000525669 FSD1Q9BTV5 496 aa10.64□□□□□ -0.71
PABPC4-220ENST00000525669 IL25Q9H293 177 aa10.64□□□□□ -0.71
PABPC4-220ENST00000525669 SNRKQ9NRH2 765 aa10.64□□□□□ -0.71
PABPC4-220ENST00000525669 CHGBP05060 677 aa10.63□□□□□ -0.71
PABPC4-220ENST00000525669 IFIT1P09914 478 aaKnown RBP10.63□□□□□ -0.71
PABPC4-220ENST00000525669 SCARF1Q14162 830 aa10.63□□□□□ -0.71
PABPC4-220ENST00000525669 PUM3Q15397 648 aaKnown RBP10.63□□□□□ -0.71
PABPC4-220ENST00000525669 CCDC158Q5M9N0 1113 aa10.63□□□□□ -0.71
PABPC4-220ENST00000525669 CWC27Q6UX04 472 aaKnown RBP10.63□□□□□ -0.71
PABPC4-220ENST00000525669 DDX46Q7L014 1031 aaKnown RBP10.63□□□□□ -0.71
PABPC4-220ENST00000525669 NLGN1Q8N2Q7 840 aa10.63□□□□□ -0.71
PABPC4-220ENST00000525669 HAUS7Q99871 368 aa10.63□□□□□ -0.71
PABPC4-220ENST00000525669 PDGFDQ9GZP0 370 aaPredicted RBP10.63□□□□□ -0.71
PABPC4-220ENST00000525669 DOCK2Q92608 1830 aa10.63□□□□□ -0.71
PABPC4-220ENST00000525669 GOLIM4O00461 696 aa10.62□□□□□ -0.71
PABPC4-220ENST00000525669 MMP10P09238 476 aa10.62□□□□□ -0.71
PABPC4-220ENST00000525669 FGFR2P21802 821 aa10.62□□□□□ -0.71
PABPC4-220ENST00000525669 RPS8P62241 208 aaKnown RBP10.62□□□□□ -0.71
PABPC4-220ENST00000525669 NMIQ13287 307 aaPredicted RBP10.62□□□□□ -0.71
PABPC4-220ENST00000525669 PI16Q6UXB8 463 aa10.62□□□□□ -0.71
PABPC4-220ENST00000525669 RPGRQ92834 1020 aaKnown RBP10.62□□□□□ -0.71
PABPC4-220ENST00000525669 ANTXR1Q9H6X2 564 aa10.62□□□□□ -0.71
PABPC4-220ENST00000525669 DIAPH3Q9NSV4 1193 aa10.62□□□□□ -0.71
PABPC4-220ENST00000525669 BSDC1Q9NW68 430 aaPredicted RBP10.62□□□□□ -0.71
PABPC4-220ENST00000525669 MINPP1Q9UNW1 487 aa10.62□□□□□ -0.71
PABPC4-220ENST00000525669 PARP3Q9Y6F1 533 aa10.62□□□□□ -0.71
PABPC4-220ENST00000525669 LRRC37AA6NMS7 1700 aa10.61□□□□□ -0.71
PABPC4-220ENST00000525669 SLC5A1P13866 664 aa10.61□□□□□ -0.71
PABPC4-220ENST00000525669 PHKA1P46020 1223 aa10.61□□□□□ -0.71
PABPC4-220ENST00000525669 FKBP4Q02790 459 aaKnown RBP eCLIP10.61□□□□□ -0.71
PABPC4-220ENST00000525669 SLFNL1Q499Z3 407 aa10.61□□□□□ -0.71
PABPC4-220ENST00000525669 LPIN2Q92539 896 aa10.61□□□□□ -0.71
PABPC4-220ENST00000525669 FAM227BQ96M60 508 aa10.61□□□□□ -0.71
PABPC4-220ENST00000525669 USP26Q9BXU7 913 aa10.61□□□□□ -0.71
PABPC4-220ENST00000525669 PAG1Q9NWQ8 432 aa10.61□□□□□ -0.71
PABPC4-220ENST00000525669 A0A0D9SFI3 127 aa10.6□□□□□ -0.71
PABPC4-220ENST00000525669 MCAMP43121 646 aa10.6□□□□□ -0.71
PABPC4-220ENST00000525669 ZAP70P43403 619 aa10.6□□□□□ -0.71
PABPC4-220ENST00000525669 SLC4A3P48751 1232 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms