RNA–Protein interactions for RNA: ENST00000525617.2

LRRK1-204, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-204ENST00000525617 POTECB2RU33 542 aa18.15■□□□□ 0.5
LRRK1-204ENST00000525617 G3V3G9 751 aa18.15■□□□□ 0.5
LRRK1-204ENST00000525617 UFL1O94874 794 aa18.15■□□□□ 0.5
LRRK1-204ENST00000525617 CCT4P50991 539 aaKnown RBP18.15■□□□□ 0.5
LRRK1-204ENST00000525617 CCDC57Q2TAC2 916 aa18.15■□□□□ 0.5
LRRK1-204ENST00000525617 DCAF8Q5TAQ9 597 aa18.15■□□□□ 0.5
LRRK1-204ENST00000525617 LMBR1LQ6UX01 489 aa18.15■□□□□ 0.5
LRRK1-204ENST00000525617 DUOX1Q9NRD9 1551 aa18.15■□□□□ 0.5
LRRK1-204ENST00000525617 UTYO14607 1347 aa18.15■□□□□ 0.5
LRRK1-204ENST00000525617 SCN4AP35499 1836 aa18.14■□□□□ 0.5
LRRK1-204ENST00000525617 SPEF2Q9C093 1822 aa18.14■□□□□ 0.5
LRRK1-204ENST00000525617 RIMBP2O15034 1052 aa18.14■□□□□ 0.49
LRRK1-204ENST00000525617 IPO8O15397 1037 aaKnown RBP18.14■□□□□ 0.49
LRRK1-204ENST00000525617 NBPF7P0C2Y1 421 aaPredicted RBP18.14■□□□□ 0.49
LRRK1-204ENST00000525617 ATP2B4P23634 1241 aa18.14■□□□□ 0.49
LRRK1-204ENST00000525617 SMC1BQ8NDV3 1235 aa18.14■□□□□ 0.49
LRRK1-204ENST00000525617 ARHGAP45Q92619 1136 aa18.14■□□□□ 0.49
LRRK1-204ENST00000525617 HACL1Q9UJ83 578 aa18.14■□□□□ 0.49
LRRK1-204ENST00000525617 MINPP1Q9UNW1 487 aa18.14■□□□□ 0.49
LRRK1-204ENST00000525617 LMOD1P29536 600 aaPredicted RBP18.13■□□□□ 0.49
LRRK1-204ENST00000525617 FSTL1Q12841 308 aa18.13■□□□□ 0.49
LRRK1-204ENST00000525617 TNIP1Q15025 636 aa18.13■□□□□ 0.49
LRRK1-204ENST00000525617 TAF7LQ5H9L4 462 aa18.13■□□□□ 0.49
LRRK1-204ENST00000525617 EPHA10Q5JZY3 1008 aa18.13■□□□□ 0.49
LRRK1-204ENST00000525617 CIAPIN1Q6FI81 312 aa18.13■□□□□ 0.49
LRRK1-204ENST00000525617 SUCLG2Q96I99 432 aa18.13■□□□□ 0.49
LRRK1-204ENST00000525617 LTBP1Q14766 1721 aa18.12■□□□□ 0.49
LRRK1-204ENST00000525617 CXCL9Q07325 125 aa18.12■□□□□ 0.49
LRRK1-204ENST00000525617 ANKRD2Q9GZV1 360 aa18.12■□□□□ 0.49
LRRK1-204ENST00000525617 FRAT1Q92837 279 aaPredicted RBP18.11■□□□□ 0.49
LRRK1-204ENST00000525617 USP44Q9H0E7 712 aa18.11■□□□□ 0.49
LRRK1-204ENST00000525617 TAF1DQ9H5J8 278 aaPredicted RBP18.11■□□□□ 0.49
LRRK1-204ENST00000525617 DBNDD1Q9H9R9 158 aa18.11■□□□□ 0.49
LRRK1-204ENST00000525617 RAD17O75943 681 aa18.1■□□□□ 0.49
LRRK1-204ENST00000525617 HSPA6P17066 643 aa18.1■□□□□ 0.49
LRRK1-204ENST00000525617 EPHX2P34913 555 aa18.1■□□□□ 0.49
LRRK1-204ENST00000525617 DOK7Q18PE1 504 aa18.1■□□□□ 0.49
LRRK1-204ENST00000525617 PNMA8AQ86V59 439 aaPredicted RBP18.1■□□□□ 0.49
LRRK1-204ENST00000525617 GPR101Q96P66 508 aaPredicted RBP18.1■□□□□ 0.49
LRRK1-204ENST00000525617 BICC1Q9H694 974 aaKnown RBP18.1■□□□□ 0.49
LRRK1-204ENST00000525617 HDAC5Q9UQL6 1122 aa18.1■□□□□ 0.49
LRRK1-204ENST00000525617 LEMD3Q9Y2U8 911 aa18.1■□□□□ 0.49
LRRK1-204ENST00000525617 ECE2O60344 883 aa18.09■□□□□ 0.49
LRRK1-204ENST00000525617 BCAR3O75815 825 aa18.09■□□□□ 0.49
LRRK1-204ENST00000525617 LDHAL6AQ6ZMR3 332 aa18.09■□□□□ 0.49
LRRK1-204ENST00000525617 KAZALD1Q96I82 304 aa18.09■□□□□ 0.49
LRRK1-204ENST00000525617 YDJCA8MPS7 323 aa18.08■□□□□ 0.48
LRRK1-204ENST00000525617 UBTFL1P0CB47 393 aaPredicted RBP18.08■□□□□ 0.48
LRRK1-204ENST00000525617 KCNJ4P48050 445 aa18.08■□□□□ 0.48
LRRK1-204ENST00000525617 CHRNDQ07001 517 aa18.08■□□□□ 0.48
LRRK1-204ENST00000525617 EAPPQ56P03 285 aaPredicted RBP18.08■□□□□ 0.48
LRRK1-204ENST00000525617 CNNM1Q9NRU3 951 aa18.08■□□□□ 0.48
LRRK1-204ENST00000525617 SCNN1DP51172 638 aa18.07■□□□□ 0.48
LRRK1-204ENST00000525617 RABL6Q3YEC7 729 aaPredicted RBP18.07■□□□□ 0.48
LRRK1-204ENST00000525617 CHADLQ6NUI6 762 aa18.07■□□□□ 0.48
LRRK1-204ENST00000525617 ATF7IPQ6VMQ6 1270 aa18.07■□□□□ 0.48
LRRK1-204ENST00000525617 LDHDQ86WU2 507 aa18.07■□□□□ 0.48
LRRK1-204ENST00000525617 ZNF594Q96JF6 807 aaPredicted RBP18.07■□□□□ 0.48
LRRK1-204ENST00000525617 CLEC11AQ9Y240 323 aa18.07■□□□□ 0.48
LRRK1-204ENST00000525617 MED23Q9ULK4 1368 aa18.06■□□□□ 0.48
LRRK1-204ENST00000525617 ZNF804BA4D1E1 1349 aa18.06■□□□□ 0.48
LRRK1-204ENST00000525617 ZKSCAN2Q63HK3 967 aa18.06■□□□□ 0.48
LRRK1-204ENST00000525617 INTS3Q68E01 1043 aaKnown RBP18.06■□□□□ 0.48
LRRK1-204ENST00000525617 GPRC5DQ9NZD1 345 aa18.06■□□□□ 0.48
LRRK1-204ENST00000525617 TRIM27P14373 513 aa18.05■□□□□ 0.48
LRRK1-204ENST00000525617 EPS15P42566 896 aa18.05■□□□□ 0.48
LRRK1-204ENST00000525617 GMPSP49915 693 aaPredicted RBP18.05■□□□□ 0.48
LRRK1-204ENST00000525617 PODNQ7Z5L7 613 aa18.05■□□□□ 0.48
LRRK1-204ENST00000525617 PSMD14O00487 310 aa18.04■□□□□ 0.48
LRRK1-204ENST00000525617 POTEIP0CG38 1075 aa18.04■□□□□ 0.48
LRRK1-204ENST00000525617 POTEJP0CG39 1038 aa18.04■□□□□ 0.48
LRRK1-204ENST00000525617 APLP1P51693 650 aa18.04■□□□□ 0.48
LRRK1-204ENST00000525617 USP50Q70EL3 339 aaPredicted RBP18.04■□□□□ 0.48
LRRK1-204ENST00000525617 ANKRD44Q8N8A2 993 aa18.04■□□□□ 0.48
LRRK1-204ENST00000525617 HELBQ8NG08 1087 aaPredicted RBP18.04■□□□□ 0.48
LRRK1-204ENST00000525617 ADARB2Q9NS39 739 aaKnown RBP18.04■□□□□ 0.48
LRRK1-204ENST00000525617 WTIPA6NIX2 430 aaPredicted RBP18.03■□□□□ 0.48
LRRK1-204ENST00000525617 PLIN1O60240 522 aa18.03■□□□□ 0.48
LRRK1-204ENST00000525617 TAF5LO75529 589 aa18.03■□□□□ 0.48
LRRK1-204ENST00000525617 GNAI3P08754 354 aa18.03■□□□□ 0.48
LRRK1-204ENST00000525617 RPS12P25398 132 aaKnown RBP18.03■□□□□ 0.48
LRRK1-204ENST00000525617 DPF2Q92785 391 aa18.03■□□□□ 0.48
LRRK1-204ENST00000525617 CLUAP1Q96AJ1 413 aa18.03■□□□□ 0.48
LRRK1-204ENST00000525617 COA1Q9GZY4 146 aa18.03■□□□□ 0.48
LRRK1-204ENST00000525617 CNOT7Q9UIV1 285 aaKnown RBP18.03■□□□□ 0.48
LRRK1-204ENST00000525617 H7C1D1 291 aa18.02■□□□□ 0.48
LRRK1-204ENST00000525617 KCNQ5Q9NR82 932 aa18.02■□□□□ 0.48
LRRK1-204ENST00000525617 ZBTB12Q9Y330 459 aaPredicted RBP18.02■□□□□ 0.48
LRRK1-204ENST00000525617 MROH5Q6ZUA9 1318 aa18.01■□□□□ 0.47
LRRK1-204ENST00000525617 VIL1P09327 827 aaKnown RBP18.01■□□□□ 0.47
LRRK1-204ENST00000525617 FTSJ3Q8IY81 847 aaKnown RBP18.01■□□□□ 0.47
LRRK1-204ENST00000525617 MEIS3Q99687 375 aa18.01■□□□□ 0.47
LRRK1-204ENST00000525617 USP17L3A6NCW0 530 aa18■□□□□ 0.47
LRRK1-204ENST00000525617 USP17L4A6NCW7 530 aa18■□□□□ 0.47
LRRK1-204ENST00000525617 USP17L1Q7RTZ2 530 aa18■□□□□ 0.47
LRRK1-204ENST00000525617 TXNRD3Q86VQ6 643 aa18■□□□□ 0.47
LRRK1-204ENST00000525617 MICALL2Q8IY33 904 aa18■□□□□ 0.47
LRRK1-204ENST00000525617 PUS3Q9BZE2 481 aaKnown RBP18■□□□□ 0.47
LRRK1-204ENST00000525617 RIPOR2Q9Y4F9 1068 aa18■□□□□ 0.47
LRRK1-204ENST00000525617 LRRFIP2Q9Y608 721 aaKnown RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms