RNA–Protein interactions for RNA: ENST00000525506.1

RBBP4-216, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-216ENST00000525506 CTSWP56202 376 aa13.34□□□□□ -0.27
RBBP4-216ENST00000525506 UBE3BQ7Z3V4 1068 aa13.34□□□□□ -0.27
RBBP4-216ENST00000525506 TBC1D16Q8TBP0 767 aa13.34□□□□□ -0.27
RBBP4-216ENST00000525506 DNAAF4Q8WXU2 420 aa13.34□□□□□ -0.27
RBBP4-216ENST00000525506 BCL2L13Q9BXK5 485 aa13.34□□□□□ -0.27
RBBP4-216ENST00000525506 ZBTB12Q9Y330 459 aaPredicted RBP13.34□□□□□ -0.27
RBBP4-216ENST00000525506 WTIPA6NIX2 430 aaPredicted RBP13.33□□□□□ -0.28
RBBP4-216ENST00000525506 F6X3S4 739 aa13.33□□□□□ -0.28
RBBP4-216ENST00000525506 H7C1W4 665 aa13.33□□□□□ -0.28
RBBP4-216ENST00000525506 UFL1O94874 794 aa13.33□□□□□ -0.28
RBBP4-216ENST00000525506 GCKRQ14397 625 aa13.33□□□□□ -0.28
RBBP4-216ENST00000525506 ANKRD18AQ8IVF6 992 aa13.33□□□□□ -0.28
RBBP4-216ENST00000525506 TTLL11Q8NHH1 800 aa13.33□□□□□ -0.28
RBBP4-216ENST00000525506 GREM2Q9H772 168 aa13.33□□□□□ -0.28
RBBP4-216ENST00000525506 ANKIB1Q9P2G1 1089 aa13.33□□□□□ -0.28
RBBP4-216ENST00000525506 TMEM88BA6NKF7 163 aa13.32□□□□□ -0.28
RBBP4-216ENST00000525506 TRAF5O00463 557 aa13.32□□□□□ -0.28
RBBP4-216ENST00000525506 PSMD14O00487 310 aa13.32□□□□□ -0.28
RBBP4-216ENST00000525506 ECE2O60344 883 aa13.32□□□□□ -0.28
RBBP4-216ENST00000525506 TNIP1Q15025 636 aa13.32□□□□□ -0.28
RBBP4-216ENST00000525506 USP50Q70EL3 339 aaPredicted RBP13.32□□□□□ -0.28
RBBP4-216ENST00000525506 EYA3Q99504 573 aa13.32□□□□□ -0.28
RBBP4-216ENST00000525506 ADARB2Q9NS39 739 aaKnown RBP13.32□□□□□ -0.28
RBBP4-216ENST00000525506 CNOT7Q9UIV1 285 aaKnown RBP13.32□□□□□ -0.28
RBBP4-216ENST00000525506 GGA1Q9UJY5 639 aa13.32□□□□□ -0.28
RBBP4-216ENST00000525506 HIRAP54198 1017 aaPredicted RBP13.31□□□□□ -0.28
RBBP4-216ENST00000525506 CASP7P55210 303 aa13.31□□□□□ -0.28
RBBP4-216ENST00000525506 TRPM4Q8TD43 1214 aa13.31□□□□□ -0.28
RBBP4-216ENST00000525506 PODXL2Q9NZ53 605 aa13.31□□□□□ -0.28
RBBP4-216ENST00000525506 CNTNAP1P78357 1384 aa13.31□□□□□ -0.28
RBBP4-216ENST00000525506 RTL9Q8NET4 1388 aa13.31□□□□□ -0.28
RBBP4-216ENST00000525506 PSME4Q14997 1843 aa13.3□□□□□ -0.28
RBBP4-216ENST00000525506 ALDH1L2Q3SY69 923 aa13.3□□□□□ -0.28
RBBP4-216ENST00000525506 MICALL2Q8IY33 904 aa13.3□□□□□ -0.28
RBBP4-216ENST00000525506 LINS1Q8NG48 757 aa13.3□□□□□ -0.28
RBBP4-216ENST00000525506 CDC5LQ99459 802 aaKnown RBP13.3□□□□□ -0.28
RBBP4-216ENST00000525506 ZC3H12CQ9C0D7 883 aaKnown RBP13.3□□□□□ -0.28
RBBP4-216ENST00000525506 PTPRCP08575 1304 aa13.3□□□□□ -0.28
RBBP4-216ENST00000525506 G3V3G9 751 aa13.29□□□□□ -0.28
RBBP4-216ENST00000525506 EGFRP00533 1210 aa13.29□□□□□ -0.28
RBBP4-216ENST00000525506 HSPA1AP0DMV8 641 aaKnown RBP13.29□□□□□ -0.28
RBBP4-216ENST00000525506 HSPA1BP0DMV9 641 aaKnown RBP13.29□□□□□ -0.28
RBBP4-216ENST00000525506 VEGFBP49765 207 aa13.29□□□□□ -0.28
RBBP4-216ENST00000525506 FAM161AQ3B820 660 aa13.29□□□□□ -0.28
RBBP4-216ENST00000525506 DCAF8Q5TAQ9 597 aa13.29□□□□□ -0.28
RBBP4-216ENST00000525506 SAMD7Q7Z3H4 446 aa13.29□□□□□ -0.28
RBBP4-216ENST00000525506 CDCA7LQ96GN5 454 aa13.29□□□□□ -0.28
RBBP4-216ENST00000525506 H7C1D1 291 aa13.28□□□□□ -0.28
RBBP4-216ENST00000525506 ITGA6P23229 1130 aa13.28□□□□□ -0.28
RBBP4-216ENST00000525506 BRPF1P55201 1214 aaPredicted RBP13.28□□□□□ -0.28
RBBP4-216ENST00000525506 BEND3Q5T5X7 828 aa13.28□□□□□ -0.28
RBBP4-216ENST00000525506 RBM26Q5T8P6 1007 aaKnown RBP13.28□□□□□ -0.28
RBBP4-216ENST00000525506 CST9Q5W186 159 aa13.28□□□□□ -0.28
RBBP4-216ENST00000525506 DLK2Q6UY11 383 aa13.28□□□□□ -0.28
RBBP4-216ENST00000525506 PLA2G12BQ9BX93 195 aa13.28□□□□□ -0.28
RBBP4-216ENST00000525506 GLIS2Q9BZE0 524 aaPredicted RBP13.28□□□□□ -0.28
RBBP4-216ENST00000525506 BSDC1Q9NW68 430 aaPredicted RBP13.28□□□□□ -0.28
RBBP4-216ENST00000525506 ABT1Q9ULW3 272 aaKnown RBP13.28□□□□□ -0.28
RBBP4-216ENST00000525506 MINPP1Q9UNW1 487 aa13.28□□□□□ -0.28
RBBP4-216ENST00000525506 XDHP47989 1333 aa13.28□□□□□ -0.28
RBBP4-216ENST00000525506 ATP2B4P23634 1241 aa13.27□□□□□ -0.29
RBBP4-216ENST00000525506 TBC1D10BQ4KMP7 808 aaPredicted RBP13.27□□□□□ -0.29
RBBP4-216ENST00000525506 COL13A1Q5TAT6 717 aaPredicted RBP13.27□□□□□ -0.29
RBBP4-216ENST00000525506 IFFO2Q5TF58 517 aa13.27□□□□□ -0.29
RBBP4-216ENST00000525506 ZBED9Q6R2W3 1325 aa13.27□□□□□ -0.29
RBBP4-216ENST00000525506 A0A1B0GUL6 1792 aa13.27□□□□□ -0.29
RBBP4-216ENST00000525506 ZNF646O15015 1829 aaPredicted RBP13.26□□□□□ -0.29
RBBP4-216ENST00000525506 CSF1RP07333 972 aa13.26□□□□□ -0.29
RBBP4-216ENST00000525506 VIL1P09327 827 aaKnown RBP13.26□□□□□ -0.29
RBBP4-216ENST00000525506 FOXO4P98177 505 aa13.26□□□□□ -0.29
RBBP4-216ENST00000525506 HNRNPUQ00839 825 aaKnown RBP eCLIP13.26□□□□□ -0.29
RBBP4-216ENST00000525506 DEFB115Q30KQ5 88 aa13.26□□□□□ -0.29
RBBP4-216ENST00000525506 SLC4A10Q6U841 1118 aa13.26□□□□□ -0.29
RBBP4-216ENST00000525506 MRPL50Q8N5N7 158 aaKnown RBP13.26□□□□□ -0.29
RBBP4-216ENST00000525506 DPF2Q92785 391 aa13.26□□□□□ -0.29
RBBP4-216ENST00000525506 PGAP2Q9UHJ9 254 aa13.26□□□□□ -0.29
RBBP4-216ENST00000525506 RASSF10A6NK89 507 aa13.25□□□□□ -0.29
RBBP4-216ENST00000525506 ALDH1L1O75891 902 aa13.25□□□□□ -0.29
RBBP4-216ENST00000525506 KLRK1P26718 216 aa13.25□□□□□ -0.29
RBBP4-216ENST00000525506 IGHMBP2P38935 993 aaKnown RBP13.25□□□□□ -0.29
RBBP4-216ENST00000525506 CCT4P50991 539 aaKnown RBP13.25□□□□□ -0.29
RBBP4-216ENST00000525506 EPHA10Q5JZY3 1008 aa13.25□□□□□ -0.29
RBBP4-216ENST00000525506 USP48Q86UV5 1035 aa13.25□□□□□ -0.29
RBBP4-216ENST00000525506 TXNRD3Q86VQ6 643 aa13.25□□□□□ -0.29
RBBP4-216ENST00000525506 SSH1Q8WYL5 1049 aa13.25□□□□□ -0.29
RBBP4-216ENST00000525506 ZNF408Q9H9D4 720 aa13.25□□□□□ -0.29
RBBP4-216ENST00000525506 CHMP3Q9Y3E7 222 aa13.25□□□□□ -0.29
RBBP4-216ENST00000525506 ASTN2O75129 1339 aaPredicted RBP13.24□□□□□ -0.29
RBBP4-216ENST00000525506 SNAP23O00161 211 aa13.24□□□□□ -0.29
RBBP4-216ENST00000525506 CELF2O95319 508 aaKnown RBP13.24□□□□□ -0.29
RBBP4-216ENST00000525506 RPS12P25398 132 aaKnown RBP13.24□□□□□ -0.29
RBBP4-216ENST00000525506 GRM1Q13255 1194 aa13.24□□□□□ -0.29
RBBP4-216ENST00000525506 MPHOSPH8Q99549 860 aa13.24□□□□□ -0.29
RBBP4-216ENST00000525506 MXD3Q9BW11 206 aa13.24□□□□□ -0.29
RBBP4-216ENST00000525506 WDR33Q9C0J8 1336 aaKnown RBP13.23□□□□□ -0.29
RBBP4-216ENST00000525506 ANKRD18BA2A2Z9 1011 aa13.23□□□□□ -0.29
RBBP4-216ENST00000525506 CYP4F22Q6NT55 531 aa13.23□□□□□ -0.29
RBBP4-216ENST00000525506 RSBN1LQ6PCB5 846 aaPredicted RBP13.23□□□□□ -0.29
RBBP4-216ENST00000525506 LMBR1LQ6UX01 489 aa13.23□□□□□ -0.29
RBBP4-216ENST00000525506 PAXIP1Q6ZW49 1069 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms