RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 RBM26Q5T8P6 1007 aaKnown RBP31.04■■■□□ 2.56
USP47-205ENST00000525257 ZBTB38Q8NAP3 1195 aaPredicted RBP31.04■■■□□ 2.56
USP47-205ENST00000525257 SEC31BQ9NQW1 1179 aa31.04■■■□□ 2.56
USP47-205ENST00000525257 CA12O43570 354 aa31.03■■■□□ 2.56
USP47-205ENST00000525257 KRT26Q7Z3Y9 468 aa31.03■■■□□ 2.56
USP47-205ENST00000525257 MYD88Q99836 296 aa31.03■■■□□ 2.56
USP47-205ENST00000525257 POLR2AP24928 1970 aaKnown RBP31.03■■■□□ 2.56
USP47-205ENST00000525257 SCN9AQ15858 1988 aa31.03■■■□□ 2.56
USP47-205ENST00000525257 IFT57Q9NWB7 429 aa31.02■■■□□ 2.56
USP47-205ENST00000525257 ZC3H12CQ9C0D7 883 aaKnown RBP31.01■■■□□ 2.55
USP47-205ENST00000525257 CCDC85CA6NKD9 419 aa31■■■□□ 2.55
USP47-205ENST00000525257 ADM5C9JUS6 153 aa31■■■□□ 2.55
USP47-205ENST00000525257 APAF1O14727 1248 aa31■■■□□ 2.55
USP47-205ENST00000525257 UFL1O94874 794 aa31■■■□□ 2.55
USP47-205ENST00000525257 ZIC5Q96T25 663 aa31■■■□□ 2.55
USP47-205ENST00000525257 ANKIB1Q9P2G1 1089 aa31■■■□□ 2.55
USP47-205ENST00000525257 CASP8AP2Q9UKL3 1982 aa30.99■■■□□ 2.55
USP47-205ENST00000525257 GNAI1P63096 354 aa30.99■■■□□ 2.55
USP47-205ENST00000525257 NOGQ13253 232 aa30.99■■■□□ 2.55
USP47-205ENST00000525257 JARID2Q92833 1246 aaPredicted RBP30.99■■■□□ 2.55
USP47-205ENST00000525257 DCPSQ96C86 337 aaKnown RBP30.99■■■□□ 2.55
USP47-205ENST00000525257 PODXL2Q9NZ53 605 aa30.99■■■□□ 2.55
USP47-205ENST00000525257 G3V3G9 751 aa30.98■■■□□ 2.55
USP47-205ENST00000525257 HSP90B1P14625 803 aaKnown RBP30.98■■■□□ 2.55
USP47-205ENST00000525257 KIF4BQ2VIQ3 1234 aa30.98■■■□□ 2.55
USP47-205ENST00000525257 FAM161AQ3B820 660 aa30.98■■■□□ 2.55
USP47-205ENST00000525257 DCAF8Q5TAQ9 597 aa30.98■■■□□ 2.55
USP47-205ENST00000525257 CCDC85AQ96PX6 553 aaPredicted RBP30.98■■■□□ 2.55
USP47-205ENST00000525257 PRKRIP1Q9H875 184 aaPredicted RBP30.98■■■□□ 2.55
USP47-205ENST00000525257 CALD1Q05682 793 aaKnown RBP30.97■■■□□ 2.55
USP47-205ENST00000525257 CCDC152Q4G0S7 254 aa30.97■■■□□ 2.55
USP47-205ENST00000525257 CCDC191Q8NCU4 936 aa30.97■■■□□ 2.55
USP47-205ENST00000525257 GBA2Q9HCG7 927 aaPredicted RBP30.97■■■□□ 2.55
USP47-205ENST00000525257 GGA1Q9UJY5 639 aa30.97■■■□□ 2.55
USP47-205ENST00000525257 PCCAP05165 728 aaPredicted RBP30.96■■■□□ 2.55
USP47-205ENST00000525257 VIL1P09327 827 aaKnown RBP30.96■■■□□ 2.55
USP47-205ENST00000525257 CWC25Q9NXE8 425 aaPredicted RBP30.96■■■□□ 2.55
USP47-205ENST00000525257 PDE8AO60658 829 aa30.95■■■□□ 2.55
USP47-205ENST00000525257 RGMBQ6NW40 437 aa30.95■■■□□ 2.55
USP47-205ENST00000525257 C2orf69Q8N8R5 385 aa30.95■■■□□ 2.55
USP47-205ENST00000525257 C8orf58Q8NAV2 365 aa30.95■■■□□ 2.55
USP47-205ENST00000525257 GGA3Q9NZ52 723 aa30.95■■■□□ 2.55
USP47-205ENST00000525257 MCOLN1Q9GZU1 580 aa30.94■■■□□ 2.54
USP47-205ENST00000525257 ASTN2O75129 1339 aaPredicted RBP30.94■■■□□ 2.54
USP47-205ENST00000525257 METTL22Q9BUU2 404 aaPredicted RBP30.93■■■□□ 2.54
USP47-205ENST00000525257 SULF1Q8IWU6 871 aa30.92■■■□□ 2.54
USP47-205ENST00000525257 FAM155AB1AL88 458 aaPredicted RBP30.91■■■□□ 2.54
USP47-205ENST00000525257 DDX58O95786 925 aaKnown RBP30.91■■■□□ 2.54
USP47-205ENST00000525257 PSME4Q14997 1843 aa30.91■■■□□ 2.54
USP47-205ENST00000525257 CCDC30Q5VVM6 783 aa30.9■■■□□ 2.54
USP47-205ENST00000525257 ANKRD18AQ8IVF6 992 aa30.9■■■□□ 2.54
USP47-205ENST00000525257 XDHP47989 1333 aa30.9■■■□□ 2.54
USP47-205ENST00000525257 ZNF157P51786 506 aaPredicted RBP30.89■■■□□ 2.54
USP47-205ENST00000525257 RSBN1LQ6PCB5 846 aaPredicted RBP30.89■■■□□ 2.54
USP47-205ENST00000525257 MAP3K2Q9Y2U5 619 aa30.89■■■□□ 2.54
USP47-205ENST00000525257 DGKZQ13574 1117 aa30.88■■■□□ 2.53
USP47-205ENST00000525257 CCDC102AQ96A19 550 aa30.88■■■□□ 2.53
USP47-205ENST00000525257 ZNF609O15014 1411 aa30.88■■■□□ 2.53
USP47-205ENST00000525257 ZNF280AP59817 542 aaPredicted RBP30.87■■■□□ 2.53
USP47-205ENST00000525257 KIF23Q02241 960 aaPredicted RBP30.87■■■□□ 2.53
USP47-205ENST00000525257 AGBL3Q8NEM8 1001 aa30.87■■■□□ 2.53
USP47-205ENST00000525257 CDCA5Q96FF9 252 aa30.87■■■□□ 2.53
USP47-205ENST00000525257 SPEF2Q9C093 1822 aa30.87■■■□□ 2.53
USP47-205ENST00000525257 MLLT1Q03111 559 aaPredicted RBP30.86■■■□□ 2.53
USP47-205ENST00000525257 SCARF1Q14162 830 aa30.86■■■□□ 2.53
USP47-205ENST00000525257 ANGEL2Q5VTE6 544 aaKnown RBP30.86■■■□□ 2.53
USP47-205ENST00000525257 TSPYL6Q8N831 410 aa30.86■■■□□ 2.53
USP47-205ENST00000525257 CTSWP56202 376 aa30.85■■■□□ 2.53
USP47-205ENST00000525257 ATP2B4P23634 1241 aa30.84■■■□□ 2.53
USP47-205ENST00000525257 CHMP4AQ9BY43 222 aa30.84■■■□□ 2.53
USP47-205ENST00000525257 MYH3P11055 1940 aa30.84■■■□□ 2.53
USP47-205ENST00000525257 PI4KAP2A4QPH2 592 aa30.83■■■□□ 2.53
USP47-205ENST00000525257 IGKV5-2P06315 115 aa30.83■■■□□ 2.53
USP47-205ENST00000525257 RGS19P49795 217 aa30.83■■■□□ 2.53
USP47-205ENST00000525257 KSR2Q6VAB6 950 aa30.83■■■□□ 2.53
USP47-205ENST00000525257 PI4KAP1Q8N8J0 262 aa30.83■■■□□ 2.53
USP47-205ENST00000525257 GMLQ99445 158 aa30.83■■■□□ 2.53
USP47-205ENST00000525257 CDC5LQ99459 802 aaKnown RBP30.83■■■□□ 2.53
USP47-205ENST00000525257 WTIPA6NIX2 430 aaPredicted RBP30.82■■■□□ 2.52
USP47-205ENST00000525257 SLC10A3P09131 477 aa30.82■■■□□ 2.52
USP47-205ENST00000525257 USP17L8P0C7I0 530 aa30.82■■■□□ 2.52
USP47-205ENST00000525257 TSR2Q969E8 191 aaKnown RBP30.82■■■□□ 2.52
USP47-205ENST00000525257 MYOZ2Q9NPC6 264 aa30.82■■■□□ 2.52
USP47-205ENST00000525257 SAGE1Q9NXZ1 904 aa30.82■■■□□ 2.52
USP47-205ENST00000525257 USP17L3A6NCW0 530 aa30.81■■■□□ 2.52
USP47-205ENST00000525257 USP17L4A6NCW7 530 aa30.81■■■□□ 2.52
USP47-205ENST00000525257 USP17L1Q7RTZ2 530 aa30.81■■■□□ 2.52
USP47-205ENST00000525257 AKAP11Q9UKA4 1901 aa30.81■■■□□ 2.52
USP47-205ENST00000525257 PODNQ7Z5L7 613 aa30.8■■■□□ 2.52
USP47-205ENST00000525257 TTLL11Q8NHH1 800 aa30.8■■■□□ 2.52
USP47-205ENST00000525257 GREM2Q9H772 168 aa30.8■■■□□ 2.52
USP47-205ENST00000525257 TRPA1O75762 1119 aa30.79■■■□□ 2.52
USP47-205ENST00000525257 NEXNQ0ZGT2 675 aa30.79■■■□□ 2.52
USP47-205ENST00000525257 CWF19L2Q2TBE0 894 aaKnown RBP30.79■■■□□ 2.52
USP47-205ENST00000525257 RNF186Q9NXI6 227 aa30.79■■■□□ 2.52
USP47-205ENST00000525257 MINPP1Q9UNW1 487 aa30.79■■■□□ 2.52
USP47-205ENST00000525257 MED23Q9ULK4 1368 aa30.79■■■□□ 2.52
USP47-205ENST00000525257 STK31Q9BXU1 1019 aa30.78■■■□□ 2.52
USP47-205ENST00000525257 BSDC1Q9NW68 430 aaPredicted RBP30.78■■■□□ 2.52
USP47-205ENST00000525257 SCAF8Q9UPN6 1271 aaKnown RBP30.78■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms