RNA–Protein interactions for RNA: ENST00000524570.5

PUF60-205, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 2

Gene PUF60, Length 1,934 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-205ENST00000524570 SPEF2Q9C093 1822 aa20.08■□□□□ 0.81
PUF60-205ENST00000524570 ZPR1O75312 459 aa20.08■□□□□ 0.81
PUF60-205ENST00000524570 CCDC24Q8N4L8 307 aa20.08■□□□□ 0.81
PUF60-205ENST00000524570 UBR3Q6ZT12 1888 aa20.08■□□□□ 0.8
PUF60-205ENST00000524570 RAD50Q92878 1312 aa20.08■□□□□ 0.8
PUF60-205ENST00000524570 SCARF1Q14162 830 aa20.08■□□□□ 0.8
PUF60-205ENST00000524570 RABEP1Q15276 862 aa20.08■□□□□ 0.8
PUF60-205ENST00000524570 ATP2B3Q16720 1220 aa20.08■□□□□ 0.8
PUF60-205ENST00000524570 HSCBQ8IWL3 235 aa20.08■□□□□ 0.8
PUF60-205ENST00000524570 SLKQ9H2G2 1235 aaPredicted RBP20.08■□□□□ 0.8
PUF60-205ENST00000524570 ANTXR1Q9H6X2 564 aa20.08■□□□□ 0.8
PUF60-205ENST00000524570 RTL9Q8NET4 1388 aa20.07■□□□□ 0.8
PUF60-205ENST00000524570 TAF1P21675 1872 aa20.07■□□□□ 0.8
PUF60-205ENST00000524570 SNAP23O00161 211 aa20.07■□□□□ 0.8
PUF60-205ENST00000524570 SLFNL1Q499Z3 407 aa20.07■□□□□ 0.8
PUF60-205ENST00000524570 AKAP2Q9Y2D5 859 aa20.07■□□□□ 0.8
PUF60-205ENST00000524570 CCDC152Q4G0S7 254 aa20.06■□□□□ 0.8
PUF60-205ENST00000524570 TRAPPC3LQ5T215 181 aa20.06■□□□□ 0.8
PUF60-205ENST00000524570 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.06■□□□□ 0.8
PUF60-205ENST00000524570 GOLIM4O00461 696 aa20.06■□□□□ 0.8
PUF60-205ENST00000524570 PDE8BO95263 885 aa20.06■□□□□ 0.8
PUF60-205ENST00000524570 HSPA4P34932 840 aa20.06■□□□□ 0.8
PUF60-205ENST00000524570 SNRKQ9NRH2 765 aa20.06■□□□□ 0.8
PUF60-205ENST00000524570 RFC4P35249 363 aa20.05■□□□□ 0.8
PUF60-205ENST00000524570 SLC10A5Q5PT55 438 aa20.05■□□□□ 0.8
PUF60-205ENST00000524570 ZNF589Q86UQ0 364 aaPredicted RBP20.05■□□□□ 0.8
PUF60-205ENST00000524570 SETDB2Q96T68 719 aa20.05■□□□□ 0.8
PUF60-205ENST00000524570 IFIT1P09914 478 aaKnown RBP20.04■□□□□ 0.8
PUF60-205ENST00000524570 SF3B3Q15393 1217 aaKnown RBP20.04■□□□□ 0.8
PUF60-205ENST00000524570 PI16Q6UXB8 463 aa20.04■□□□□ 0.8
PUF60-205ENST00000524570 RUFY2Q8WXA3 655 aa20.04■□□□□ 0.8
PUF60-205ENST00000524570 IL17RAQ96F46 866 aa20.04■□□□□ 0.8
PUF60-205ENST00000524570 PAG1Q9NWQ8 432 aa20.04■□□□□ 0.8
PUF60-205ENST00000524570 MED23Q9ULK4 1368 aa20.04■□□□□ 0.8
PUF60-205ENST00000524570 TAF5LO75529 589 aa20.04■□□□□ 0.8
PUF60-205ENST00000524570 FGFR2P21802 821 aa20.04■□□□□ 0.8
PUF60-205ENST00000524570 TXNRD1Q16881 649 aa20.04■□□□□ 0.8
PUF60-205ENST00000524570 SLC27A3Q5K4L6 730 aa20.04■□□□□ 0.8
PUF60-205ENST00000524570 RASEFQ8IZ41 740 aa20.04■□□□□ 0.8
PUF60-205ENST00000524570 KBTBD3Q8NAB2 608 aa20.04■□□□□ 0.8
PUF60-205ENST00000524570 SEC62Q99442 399 aaKnown RBP20.04■□□□□ 0.8
PUF60-205ENST00000524570 HIP1O00291 1037 aa20.03■□□□□ 0.8
PUF60-205ENST00000524570 EPB41L2O43491 1005 aaKnown RBP20.03■□□□□ 0.8
PUF60-205ENST00000524570 NFIXQ14938 502 aa20.03■□□□□ 0.8
PUF60-205ENST00000524570 NBPF5PQ86XG9 351 aaPredicted RBP20.03■□□□□ 0.8
PUF60-205ENST00000524570 TTC39AQ5SRH9 613 aa20.02■□□□□ 0.8
PUF60-205ENST00000524570 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.02■□□□□ 0.8
PUF60-205ENST00000524570 MROH5Q6ZUA9 1318 aa20.02■□□□□ 0.8
PUF60-205ENST00000524570 K7ELQ4 463 aaPredicted RBP20.02■□□□□ 0.79
PUF60-205ENST00000524570 GORABQ5T7V8 394 aa20.02■□□□□ 0.79
PUF60-205ENST00000524570 CCDC129Q6ZRS4 1044 aa20.02■□□□□ 0.79
PUF60-205ENST00000524570 SNX14Q9Y5W7 946 aa20.02■□□□□ 0.79
PUF60-205ENST00000524570 TNRC6CQ9HCJ0 1690 aaKnown RBP20.02■□□□□ 0.79
PUF60-205ENST00000524570 CCDC171Q6TFL3 1326 aa20.01■□□□□ 0.79
PUF60-205ENST00000524570 RFX7Q2KHR2 1363 aa20.01■□□□□ 0.79
PUF60-205ENST00000524570 WTIPA6NIX2 430 aaPredicted RBP20.01■□□□□ 0.79
PUF60-205ENST00000524570 MCCP23508 829 aa20.01■□□□□ 0.79
PUF60-205ENST00000524570 CCDC158Q5M9N0 1113 aa20.01■□□□□ 0.79
PUF60-205ENST00000524570 KIAA1211Q6ZU35 1233 aa20.01■□□□□ 0.79
PUF60-205ENST00000524570 MPHOSPH8Q99549 860 aa20.01■□□□□ 0.79
PUF60-205ENST00000524570 AKAP11Q9UKA4 1901 aa20■□□□□ 0.79
PUF60-205ENST00000524570 ARAP2Q8WZ64 1704 aa20■□□□□ 0.79
PUF60-205ENST00000524570 HSP90B1P14625 803 aaKnown RBP20■□□□□ 0.79
PUF60-205ENST00000524570 GTF2E1P29083 439 aaPredicted RBP20■□□□□ 0.79
PUF60-205ENST00000524570 ZAP70P43403 619 aa20■□□□□ 0.79
PUF60-205ENST00000524570 PHKA1P46020 1223 aa20■□□□□ 0.79
PUF60-205ENST00000524570 ANAPC15P60006 121 aa20■□□□□ 0.79
PUF60-205ENST00000524570 GYS1P13807 737 aa20■□□□□ 0.79
PUF60-205ENST00000524570 MCAMP43121 646 aa20■□□□□ 0.79
PUF60-205ENST00000524570 FKBP4Q02790 459 aaKnown RBP eCLIP20■□□□□ 0.794e-12■■■■□ 23.5
PUF60-205ENST00000524570 PUM3Q15397 648 aaKnown RBP20■□□□□ 0.79
PUF60-205ENST00000524570 CELF1Q92879 486 aaKnown RBP20■□□□□ 0.79
PUF60-205ENST00000524570 NYXQ9GZU5 481 aa20■□□□□ 0.79
PUF60-205ENST00000524570 ADRA2BP18089 450 aa19.99■□□□□ 0.79
PUF60-205ENST00000524570 IGHMBP2P38935 993 aaKnown RBP19.99■□□□□ 0.79
PUF60-205ENST00000524570 NBR1Q14596 966 aa19.99■□□□□ 0.79
PUF60-205ENST00000524570 DDIT3P35638 169 aa19.98■□□□□ 0.79
PUF60-205ENST00000524570 NEK4P51957 841 aa19.98■□□□□ 0.79
PUF60-205ENST00000524570 CHRNDQ07001 517 aa19.98■□□□□ 0.79
PUF60-205ENST00000524570 ZNF827Q17R98 1081 aa19.98■□□□□ 0.79
PUF60-205ENST00000524570 MAP4K1Q92918 833 aa19.98■□□□□ 0.79
PUF60-205ENST00000524570 UPF3BQ9BZI7 483 aaKnown RBP19.98■□□□□ 0.79
PUF60-205ENST00000524570 FOXD4L1Q9NU39 408 aa19.98■□□□□ 0.79
PUF60-205ENST00000524570 A0A1B0GUL6 1792 aa19.98■□□□□ 0.79
PUF60-205ENST00000524570 NECTIN1Q15223 517 aa19.98■□□□□ 0.79
PUF60-205ENST00000524570 CCDC102BQ68D86 513 aa19.98■□□□□ 0.79
PUF60-205ENST00000524570 PRPF40BQ6NWY9 871 aaKnown RBP19.98■□□□□ 0.79
PUF60-205ENST00000524570 TPTE2Q6XPS3 522 aa19.98■□□□□ 0.79
PUF60-205ENST00000524570 SLC51AQ86UW1 340 aa19.98■□□□□ 0.79
PUF60-205ENST00000524570 LPIN2Q92539 896 aa19.98■□□□□ 0.79
PUF60-205ENST00000524570 RBM8AQ9Y5S9 174 aaKnown RBP19.98■□□□□ 0.79
PUF60-205ENST00000524570 TAF6LQ9Y6J9 622 aa19.98■□□□□ 0.79
PUF60-205ENST00000524570 APBA3O96018 575 aa19.97■□□□□ 0.79
PUF60-205ENST00000524570 TM4SF1P30408 202 aa19.97■□□□□ 0.79
PUF60-205ENST00000524570 COL9A3Q14050 684 aaPredicted RBP19.97■□□□□ 0.79
PUF60-205ENST00000524570 KCNB2Q92953 911 aa19.97■□□□□ 0.79
PUF60-205ENST00000524570 CDC5LQ99459 802 aaKnown RBP19.97■□□□□ 0.79
PUF60-205ENST00000524570 SSFA2P28290 1259 aa19.96■□□□□ 0.79
PUF60-205ENST00000524570 CARMIL3Q8ND23 1372 aa19.96■□□□□ 0.79
PUF60-205ENST00000524570 ADCK5Q3MIX3 580 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms