RNA–Protein interactions for RNA: ENST00000524384.5

PTP4A2-208, Transcript of protein tyrosine phosphatase type IVA, member 2, human

TSL 5

Gene PTP4A2, Length 663 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTP4A2-208	ENST00000524384	HIRA	P54198	1017 aa	Predicted RBP	11.12	□□□□□ -0.63
PTP4A2-208	ENST00000524384	GRIPAP1	Q4V328	841 aa		11.12	□□□□□ -0.63
PTP4A2-208	ENST00000524384	ZNF652	Q9Y2D9	606 aa		11.12	□□□□□ -0.63
PTP4A2-208	ENST00000524384	NPC1L1	Q9UHC9	1359 aa		11.12	□□□□□ -0.63
PTP4A2-208	ENST00000524384	CDHR2	Q9BYE9	1310 aa		11.11	□□□□□ -0.63
PTP4A2-208	ENST00000524384	ZNF157	P51786	506 aa	Predicted RBP	11.11	□□□□□ -0.63
PTP4A2-208	ENST00000524384	CXCL9	Q07325	125 aa		11.11	□□□□□ -0.63
PTP4A2-208	ENST00000524384	CRY2	Q49AN0	593 aa		11.11	□□□□□ -0.63
PTP4A2-208	ENST00000524384	KCTD12	Q96CX2	325 aa	Known RBP	11.11	□□□□□ -0.63
PTP4A2-208	ENST00000524384	CSRNP1	Q96S65	589 aa		11.11	□□□□□ -0.63
PTP4A2-208	ENST00000524384	FAM177B	A6PVY3	158 aa		11.1	□□□□□ -0.63
PTP4A2-208	ENST00000524384	PPIP5K2	O43314	1243 aa		11.1	□□□□□ -0.63
PTP4A2-208	ENST00000524384	IL13	P35225	146 aa		11.1	□□□□□ -0.63
PTP4A2-208	ENST00000524384	ZNF790	Q6PG37	636 aa		11.1	□□□□□ -0.63
PTP4A2-208	ENST00000524384	DLK2	Q6UY11	383 aa		11.1	□□□□□ -0.63
PTP4A2-208	ENST00000524384	USP48	Q86UV5	1035 aa		11.1	□□□□□ -0.63
PTP4A2-208	ENST00000524384	TRPM4	Q8TD43	1214 aa		11.1	□□□□□ -0.63
PTP4A2-208	ENST00000524384	GBA2	Q9HCG7	927 aa	Predicted RBP	11.1	□□□□□ -0.63
PTP4A2-208	ENST00000524384	HDAC9	Q9UKV0	1011 aa		11.1	□□□□□ -0.63
PTP4A2-208	ENST00000524384	NIP7	Q9Y221	180 aa	Known RBP eCLIP	11.1	□□□□□ -0.63
PTP4A2-208	ENST00000524384	MKI67	P46013	3256 aa	Known RBP	11.1	□□□□□ -0.63
PTP4A2-208	ENST00000524384	SLC10A3	P09131	477 aa		11.09	□□□□□ -0.63
PTP4A2-208	ENST00000524384	AOC3	Q16853	763 aa		11.09	□□□□□ -0.63
PTP4A2-208	ENST00000524384	SLC51A	Q86UW1	340 aa		11.09	□□□□□ -0.63
PTP4A2-208	ENST00000524384	C2orf69	Q8N8R5	385 aa		11.09	□□□□□ -0.63
PTP4A2-208	ENST00000524384	ZNRF3	Q9ULT6	936 aa		11.09	□□□□□ -0.63
PTP4A2-208	ENST00000524384	CUL9	Q8IWT3	2517 aa		11.09	□□□□□ -0.63
PTP4A2-208	ENST00000524384	GTF2E1	P29083	439 aa	Predicted RBP	11.08	□□□□□ -0.64
PTP4A2-208	ENST00000524384	PIP4K2A	P48426	406 aa	Predicted RBP	11.08	□□□□□ -0.64
PTP4A2-208	ENST00000524384	MTHFSD	Q2M296	383 aa	Known RBP	11.08	□□□□□ -0.64
PTP4A2-208	ENST00000524384	FBXO46	Q6PJ61	603 aa	Predicted RBP	11.08	□□□□□ -0.64
PTP4A2-208	ENST00000524384	ZNF296	Q8WUU4	475 aa	Predicted RBP	11.08	□□□□□ -0.64
PTP4A2-208	ENST00000524384	BCL2L13	Q9BXK5	485 aa		11.08	□□□□□ -0.64
PTP4A2-208	ENST00000524384	TRIOBP	Q9H2D6	2365 aa		11.08	□□□□□ -0.64
PTP4A2-208	ENST00000524384	ABCC12	Q96J65	1359 aa		11.07	□□□□□ -0.64
PTP4A2-208	ENST00000524384	HOXA10	P31260	410 aa	Predicted RBP	11.07	□□□□□ -0.64
PTP4A2-208	ENST00000524384	KRT26	Q7Z3Y9	468 aa		11.07	□□□□□ -0.64
PTP4A2-208	ENST00000524384	RPGR	Q92834	1020 aa	Known RBP	11.07	□□□□□ -0.64
PTP4A2-208	ENST00000524384	FMNL2	Q96PY5	1086 aa		11.07	□□□□□ -0.64
PTP4A2-208	ENST00000524384	VPS33B	Q9H267	617 aa		11.07	□□□□□ -0.64
PTP4A2-208	ENST00000524384	KIF7	Q2M1P5	1343 aa		11.07	□□□□□ -0.64
PTP4A2-208	ENST00000524384	SIPA1L3	O60292	1781 aa	Predicted RBP	11.06	□□□□□ -0.64
PTP4A2-208	ENST00000524384	SHTN1	A0MZ66	631 aa		11.06	□□□□□ -0.64
PTP4A2-208	ENST00000524384	TCERG1	O14776	1098 aa	Known RBP	11.06	□□□□□ -0.64
PTP4A2-208	ENST00000524384	PPEF1	O14829	653 aa	Predicted RBP	11.06	□□□□□ -0.64
PTP4A2-208	ENST00000524384	TEF	Q10587	303 aa		11.06	□□□□□ -0.64
PTP4A2-208	ENST00000524384	CNOT7	Q9UIV1	285 aa	Known RBP	11.06	□□□□□ -0.64
PTP4A2-208	ENST00000524384	RIC1	Q4ADV7	1423 aa		11.06	□□□□□ -0.64
PTP4A2-208	ENST00000524384		H7C1D1	291 aa		11.05	□□□□□ -0.64
PTP4A2-208	ENST00000524384	RAD17	O75943	681 aa		11.05	□□□□□ -0.64
PTP4A2-208	ENST00000524384	HMOX1	P09601	288 aa		11.05	□□□□□ -0.64
PTP4A2-208	ENST00000524384	TNIP1	Q15025	636 aa		11.05	□□□□□ -0.64
PTP4A2-208	ENST00000524384	SLC17A8	Q8NDX2	589 aa		11.05	□□□□□ -0.64
PTP4A2-208	ENST00000524384	DDX27	Q96GQ7	796 aa	Known RBP	11.05	□□□□□ -0.64
PTP4A2-208	ENST00000524384	LARP6	Q9BRS8	491 aa	Known RBP	11.05	□□□□□ -0.64
PTP4A2-208	ENST00000524384	POLR2A	P24928	1970 aa	Known RBP	11.05	□□□□□ -0.64
PTP4A2-208	ENST00000524384	ADM5	C9JUS6	153 aa		11.04	□□□□□ -0.64
PTP4A2-208	ENST00000524384	GTPBP6	O43824	516 aa	Predicted RBP	11.04	□□□□□ -0.64
PTP4A2-208	ENST00000524384	TBC1D8	O95759	1140 aa		11.04	□□□□□ -0.64
PTP4A2-208	ENST00000524384	PTPRE	P23469	700 aa		11.04	□□□□□ -0.64
PTP4A2-208	ENST00000524384	NUTM1	Q86Y26	1132 aa		11.04	□□□□□ -0.64
PTP4A2-208	ENST00000524384	CRAMP1	Q96RY5	1269 aa		11.04	□□□□□ -0.64
PTP4A2-208	ENST00000524384	VPS9D1	Q9Y2B5	631 aa		11.04	□□□□□ -0.64
PTP4A2-208	ENST00000524384	USP16	Q9Y5T5	823 aa		11.04	□□□□□ -0.64
PTP4A2-208	ENST00000524384	CEP290	O15078	2479 aa		11.04	□□□□□ -0.64
PTP4A2-208	ENST00000524384	KIAA0100	Q14667	2235 aa	Known RBP	11.03	□□□□□ -0.64
PTP4A2-208	ENST00000524384	EVI5	O60447	810 aa		11.03	□□□□□ -0.64
PTP4A2-208	ENST00000524384	HLF	Q16534	295 aa		11.03	□□□□□ -0.64
PTP4A2-208	ENST00000524384	NOM1	Q5C9Z4	860 aa	Known RBP	11.03	□□□□□ -0.64
PTP4A2-208	ENST00000524384	SAMD7	Q7Z3H4	446 aa		11.03	□□□□□ -0.64
PTP4A2-208	ENST00000524384	MORC1	Q86VD1	984 aa		11.03	□□□□□ -0.64
PTP4A2-208	ENST00000524384	RASAL3	Q86YV0	1011 aa		11.03	□□□□□ -0.64
PTP4A2-208	ENST00000524384	SUPT20H	Q8NEM7	779 aa		11.03	□□□□□ -0.64
PTP4A2-208	ENST00000524384	IL17RE	Q8NFR9	667 aa		11.03	□□□□□ -0.64
PTP4A2-208	ENST00000524384	DCPS	Q96C86	337 aa	Known RBP	11.03	□□□□□ -0.64
PTP4A2-208	ENST00000524384	RBM17	Q96I25	401 aa	Known RBP	11.03	□□□□□ -0.64
PTP4A2-208	ENST00000524384	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.03	□□□□□ -0.64
PTP4A2-208	ENST00000524384	NYX	Q9GZU5	481 aa		11.03	□□□□□ -0.64
PTP4A2-208	ENST00000524384	TMX4	Q9H1E5	349 aa	Predicted RBP	11.03	□□□□□ -0.64
PTP4A2-208	ENST00000524384	GPR25	O00155	361 aa		11.02	□□□□□ -0.65
PTP4A2-208	ENST00000524384	KCNQ3	O43525	872 aa		11.02	□□□□□ -0.65
PTP4A2-208	ENST00000524384	FOSB	P53539	338 aa		11.02	□□□□□ -0.65
PTP4A2-208	ENST00000524384	KIAA2012	Q0VF49	1180 aa		11.02	□□□□□ -0.65
PTP4A2-208	ENST00000524384	INTS3	Q68E01	1043 aa	Known RBP	11.02	□□□□□ -0.65
PTP4A2-208	ENST00000524384	ATP6V0A2	Q9Y487	856 aa		11.02	□□□□□ -0.65
PTP4A2-208	ENST00000524384	RBBP6	Q7Z6E9	1792 aa	Known RBP	11.02	□□□□□ -0.65
PTP4A2-208	ENST00000524384	SZT2	Q5T011	3432 aa		11.02	□□□□□ -0.65
PTP4A2-208	ENST00000524384	PAPPA2	Q9BXP8	1791 aa		11.01	□□□□□ -0.65
PTP4A2-208	ENST00000524384	PRAMEF22	A3QJZ6	481 aa		11.01	□□□□□ -0.65
PTP4A2-208	ENST00000524384	NBPF26	B4DH59	902 aa		11.01	□□□□□ -0.65
PTP4A2-208	ENST00000524384	EGFR	P00533	1210 aa		11.01	□□□□□ -0.65
PTP4A2-208	ENST00000524384	PTPN5	P54829	565 aa		11.01	□□□□□ -0.65
PTP4A2-208	ENST00000524384	MAP3K9	P80192	1104 aa		11.01	□□□□□ -0.65
PTP4A2-208	ENST00000524384	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	11.01	□□□□□ -0.65
PTP4A2-208	ENST00000524384	NBPF10	Q6P3W6	841 aa	Known RBP	11.01	□□□□□ -0.65
PTP4A2-208	ENST00000524384	HTT	P42858	3142 aa		11.01	□□□□□ -0.65
PTP4A2-208	ENST00000524384		A0A0C4DFX4	3053 aa		11	□□□□□ -0.65
PTP4A2-208	ENST00000524384	YDJC	A8MPS7	323 aa		11	□□□□□ -0.65
PTP4A2-208	ENST00000524384	GNAT3	A8MTJ3	354 aa		11	□□□□□ -0.65
PTP4A2-208	ENST00000524384	DPP8	Q6V1X1	898 aa	Predicted RBP	11	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms