RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-213ENST00000523655 TRIM33Q9UPN9 1127 aa8.54□□□□□ -1.04
SREK1-213ENST00000523655 DEAF1O75398 565 aaPredicted RBP8.53□□□□□ -1.04
SREK1-213ENST00000523655 SSFA2P28290 1259 aa8.53□□□□□ -1.04
SREK1-213ENST00000523655 ATP11AP98196 1134 aa8.53□□□□□ -1.04
SREK1-213ENST00000523655 MBTPS1Q14703 1052 aa8.53□□□□□ -1.04
SREK1-213ENST00000523655 RSPO4Q2I0M5 234 aaPredicted RBP8.53□□□□□ -1.04
SREK1-213ENST00000523655 PHLDB3Q6NSJ2 640 aa8.53□□□□□ -1.04
SREK1-213ENST00000523655 GTF3C2Q8WUA4 911 aaPredicted RBP8.53□□□□□ -1.04
SREK1-213ENST00000523655 GHRHP01286 108 aa8.52□□□□□ -1.05
SREK1-213ENST00000523655 DNM1Q05193 864 aaKnown RBP8.52□□□□□ -1.05
SREK1-213ENST00000523655 OR13H1Q8NG92 308 aa8.52□□□□□ -1.05
SREK1-213ENST00000523655 EDEM1Q92611 657 aa8.52□□□□□ -1.05
SREK1-213ENST00000523655 ARID3AQ99856 593 aa8.52□□□□□ -1.05
SREK1-213ENST00000523655 TMEM63CQ9P1W3 806 aa8.52□□□□□ -1.05
SREK1-213ENST00000523655 SUPT5HO00267 1087 aaKnown RBP8.51□□□□□ -1.05
SREK1-213ENST00000523655 MPSTP25325 297 aa8.51□□□□□ -1.05
SREK1-213ENST00000523655 ADGRE1Q14246 886 aa8.51□□□□□ -1.05
SREK1-213ENST00000523655 IL22RA1Q8N6P7 574 aa8.51□□□□□ -1.05
SREK1-213ENST00000523655 HELQQ8TDG4 1101 aa8.51□□□□□ -1.05
SREK1-213ENST00000523655 TTC9Q92623 222 aa8.51□□□□□ -1.05
SREK1-213ENST00000523655 NACC1Q96RE7 527 aa8.51□□□□□ -1.05
SREK1-213ENST00000523655 GGNBP2Q9H3C7 697 aa8.51□□□□□ -1.05
SREK1-213ENST00000523655 ANO2Q9NQ90 1003 aa8.51□□□□□ -1.05
SREK1-213ENST00000523655 CNTN3Q9P232 1028 aa8.51□□□□□ -1.05
SREK1-213ENST00000523655 USP21Q9UK80 565 aa8.51□□□□□ -1.05
SREK1-213ENST00000523655 C9orf172C9J069 976 aa8.5□□□□□ -1.05
SREK1-213ENST00000523655 ARID4AP29374 1257 aaPredicted RBP8.5□□□□□ -1.05
SREK1-213ENST00000523655 CDC25BP30305 580 aa8.5□□□□□ -1.05
SREK1-213ENST00000523655 NKAPLQ5M9Q1 402 aa8.5□□□□□ -1.05
SREK1-213ENST00000523655 TTC39BQ5VTQ0 682 aaPredicted RBP8.5□□□□□ -1.05
SREK1-213ENST00000523655 FBXO11Q86XK2 927 aa8.5□□□□□ -1.05
SREK1-213ENST00000523655 ABTB2Q8N961 1025 aa8.5□□□□□ -1.05
SREK1-213ENST00000523655 LENG1Q96BZ8 264 aaPredicted RBP8.5□□□□□ -1.05
SREK1-213ENST00000523655 LACRTQ9GZZ8 138 aa8.5□□□□□ -1.05
SREK1-213ENST00000523655 KANSL3Q9P2N6 904 aa8.5□□□□□ -1.05
SREK1-213ENST00000523655 PPP1R15AO75807 674 aaPredicted RBP8.49□□□□□ -1.05
SREK1-213ENST00000523655 ACPPP15309 386 aa8.49□□□□□ -1.05
SREK1-213ENST00000523655 SOX18P35713 384 aa8.49□□□□□ -1.05
SREK1-213ENST00000523655 NRG1Q02297 640 aaPredicted RBP8.49□□□□□ -1.05
SREK1-213ENST00000523655 RASSF4Q9H2L5 321 aa8.49□□□□□ -1.05
SREK1-213ENST00000523655 ELP3Q9H9T3 547 aa8.49□□□□□ -1.05
SREK1-213ENST00000523655 FAM13BQ9NYF5 915 aa8.49□□□□□ -1.05
SREK1-213ENST00000523655 TRPA1O75762 1119 aa8.48□□□□□ -1.05
SREK1-213ENST00000523655 ALX3O95076 343 aa8.48□□□□□ -1.05
SREK1-213ENST00000523655 HOXD8P13378 290 aaPredicted RBP8.48□□□□□ -1.05
SREK1-213ENST00000523655 EIF1AXP47813 144 aaKnown RBP8.48□□□□□ -1.05
SREK1-213ENST00000523655 TXNDC11Q6PKC3 985 aa8.48□□□□□ -1.05
SREK1-213ENST00000523655 ABI2Q9NYB9 513 aaPredicted RBP8.48□□□□□ -1.05
SREK1-213ENST00000523655 PDGFAP04085 211 aa8.47□□□□□ -1.05
SREK1-213ENST00000523655 IREB2P48200 963 aaKnown RBP8.47□□□□□ -1.05
SREK1-213ENST00000523655 HYAL2Q12891 473 aa8.47□□□□□ -1.05
SREK1-213ENST00000523655 C8orf34Q49A92 452 aa8.47□□□□□ -1.05
SREK1-213ENST00000523655 NOM1Q5C9Z4 860 aaKnown RBP8.47□□□□□ -1.05
SREK1-213ENST00000523655 CEP135Q66GS9 1140 aa8.47□□□□□ -1.05
SREK1-213ENST00000523655 ZNF438Q7Z4V0 828 aa8.47□□□□□ -1.05
SREK1-213ENST00000523655 TXNRD3Q86VQ6 643 aa8.47□□□□□ -1.05
SREK1-213ENST00000523655 C1orf127Q8N9H9 656 aa8.47□□□□□ -1.05
SREK1-213ENST00000523655 FNDC3AQ9Y2H6 1198 aaKnown RBP8.47□□□□□ -1.05
SREK1-213ENST00000523655 DYRK3O43781 588 aa8.46□□□□□ -1.06
SREK1-213ENST00000523655 NOS3P29474 1203 aa8.46□□□□□ -1.06
SREK1-213ENST00000523655 ZNF211Q13398 564 aaPredicted RBP8.46□□□□□ -1.06
SREK1-213ENST00000523655 POLIQ9UNA4 740 aa8.46□□□□□ -1.06
SREK1-213ENST00000523655 LINC01387J3KSC0 135 aa8.45□□□□□ -1.06
SREK1-213ENST00000523655 DLL1O00548 723 aa8.45□□□□□ -1.06
SREK1-213ENST00000523655 ABL1P00519 1130 aa8.45□□□□□ -1.06
SREK1-213ENST00000523655 SETDB1Q15047 1291 aa8.45□□□□□ -1.06
SREK1-213ENST00000523655 WFDC12Q8WWY7 111 aa8.45□□□□□ -1.06
SREK1-213ENST00000523655 RBSNQ9H1K0 784 aa8.45□□□□□ -1.06
SREK1-213ENST00000523655 SH2B1Q9NRF2 756 aaPredicted RBP8.45□□□□□ -1.06
SREK1-213ENST00000523655 FOXD4L6Q3SYB3 417 aaPredicted RBP8.44□□□□□ -1.06
SREK1-213ENST00000523655 FOXD4L3Q6VB84 417 aaPredicted RBP8.44□□□□□ -1.06
SREK1-213ENST00000523655 NCAPG2Q86XI2 1143 aa8.44□□□□□ -1.06
SREK1-213ENST00000523655 DTWD1Q8N5C7 304 aa8.44□□□□□ -1.06
SREK1-213ENST00000523655 CEP120Q8N960 986 aa8.44□□□□□ -1.06
SREK1-213ENST00000523655 GALNT11Q8NCW6 608 aa8.44□□□□□ -1.06
SREK1-213ENST00000523655 TP53INP1Q96A56 240 aa8.44□□□□□ -1.06
SREK1-213ENST00000523655 HHIPQ96QV1 700 aa8.44□□□□□ -1.06
SREK1-213ENST00000523655 CARD10Q9BWT7 1032 aa8.44□□□□□ -1.06
SREK1-213ENST00000523655 KIF4AO95239 1232 aa8.43□□□□□ -1.06
SREK1-213ENST00000523655 AAMPQ13685 434 aa8.43□□□□□ -1.06
SREK1-213ENST00000523655 AGGF1Q8N302 714 aaeCLIP8.43□□□□□ -1.06
SREK1-213ENST00000523655 MEGF10Q96KG7 1140 aa8.43□□□□□ -1.06
SREK1-213ENST00000523655 SPACA7Q96KW9 195 aa8.43□□□□□ -1.06
SREK1-213ENST00000523655 SSBP4Q9BWG4 385 aaPredicted RBP8.43□□□□□ -1.06
SREK1-213ENST00000523655 CCDC87Q9NVE4 849 aa8.43□□□□□ -1.06
SREK1-213ENST00000523655 MZF1P28698 734 aaPredicted RBP8.42□□□□□ -1.06
SREK1-213ENST00000523655 PDE12Q6L8Q7 609 aaKnown RBP8.42□□□□□ -1.06
SREK1-213ENST00000523655 IGF2-ASQ6U949 168 aa8.42□□□□□ -1.06
SREK1-213ENST00000523655 POP1Q99575 1024 aaKnown RBP8.42□□□□□ -1.06
SREK1-213ENST00000523655 PBX4Q9BYU1 374 aa8.42□□□□□ -1.06
SREK1-213ENST00000523655 CHRDQ9H2X0 955 aa8.42□□□□□ -1.06
SREK1-213ENST00000523655 KCNK4Q9NYG8 393 aa8.42□□□□□ -1.06
SREK1-213ENST00000523655 PPME1Q9Y570 386 aa8.42□□□□□ -1.06
SREK1-213ENST00000523655 FZD6O60353 706 aa8.41□□□□□ -1.06
SREK1-213ENST00000523655 PRSS36Q5K4E3 855 aa8.41□□□□□ -1.06
SREK1-213ENST00000523655 XP32Q5T750 250 aa8.41□□□□□ -1.06
SREK1-213ENST00000523655 SALL4Q9UJQ4 1053 aa8.41□□□□□ -1.06
SREK1-213ENST00000523655 FOXD3Q9UJU5 478 aaPredicted RBP8.41□□□□□ -1.06
SREK1-213ENST00000523655 DDX3YO15523 660 aaKnown RBP8.4□□□□□ -1.06
SREK1-213ENST00000523655 WISP1O95388 367 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms