RNA–Protein interactions for RNA: ENST00000523555.5

PABPC1-222, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 3

Gene PABPC1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-222	ENST00000523555	SUCLG2	Q96I99	432 aa		12.08	□□□□□ -0.48
PABPC1-222	ENST00000523555	VPS33B	Q9H267	617 aa		12.08	□□□□□ -0.48
PABPC1-222	ENST00000523555	KCNQ5	Q9NR82	932 aa		12.08	□□□□□ -0.48
PABPC1-222	ENST00000523555	PODXL2	Q9NZ53	605 aa		12.08	□□□□□ -0.48
PABPC1-222	ENST00000523555	PTPRC	P08575	1304 aa		12.08	□□□□□ -0.48
PABPC1-222	ENST00000523555	SHTN1	A0MZ66	631 aa		12.07	□□□□□ -0.48
PABPC1-222	ENST00000523555	ALDH1L1	O75891	902 aa		12.07	□□□□□ -0.48
PABPC1-222	ENST00000523555	RAD17	O75943	681 aa		12.07	□□□□□ -0.48
PABPC1-222	ENST00000523555	UFL1	O94874	794 aa		12.07	□□□□□ -0.48
PABPC1-222	ENST00000523555	EPS15	P42566	896 aa		12.07	□□□□□ -0.48
PABPC1-222	ENST00000523555	RARS	P54136	660 aa	Known RBP	12.07	□□□□□ -0.48
PABPC1-222	ENST00000523555	WASHC4	Q2M389	1173 aa		12.07	□□□□□ -0.48
PABPC1-222	ENST00000523555	ZNF594	Q96JF6	807 aa	Predicted RBP	12.07	□□□□□ -0.48
PABPC1-222	ENST00000523555	CDC5L	Q99459	802 aa	Known RBP	12.07	□□□□□ -0.48
PABPC1-222	ENST00000523555	ANKIB1	Q9P2G1	1089 aa		12.07	□□□□□ -0.48
PABPC1-222	ENST00000523555	ZNRF3	Q9ULT6	936 aa		12.07	□□□□□ -0.48
PABPC1-222	ENST00000523555	NOB1	Q9ULX3	412 aa	Known RBP	12.07	□□□□□ -0.48
PABPC1-222	ENST00000523555	MINPP1	Q9UNW1	487 aa		12.07	□□□□□ -0.48
PABPC1-222	ENST00000523555	TNN	Q9UQP3	1299 aa		12.07	□□□□□ -0.48
PABPC1-222	ENST00000523555	EPHX2	P34913	555 aa		12.06	□□□□□ -0.48
PABPC1-222	ENST00000523555	FSTL1	Q12841	308 aa		12.06	□□□□□ -0.48
PABPC1-222	ENST00000523555	LMBR1L	Q6UX01	489 aa		12.06	□□□□□ -0.48
PABPC1-222	ENST00000523555	SMC1B	Q8NDV3	1235 aa		12.06	□□□□□ -0.48
PABPC1-222	ENST00000523555	BSDC1	Q9NW68	430 aa	Predicted RBP	12.06	□□□□□ -0.48
PABPC1-222	ENST00000523555	C9orf78	Q9NZ63	289 aa	Predicted RBP	12.06	□□□□□ -0.48
PABPC1-222	ENST00000523555	HACL1	Q9UJ83	578 aa		12.06	□□□□□ -0.48
PABPC1-222	ENST00000523555	GGA1	Q9UJY5	639 aa		12.06	□□□□□ -0.48
PABPC1-222	ENST00000523555	POLR2A	P24928	1970 aa	Known RBP	12.06	□□□□□ -0.48
PABPC1-222	ENST00000523555	UTY	O14607	1347 aa		12.06	□□□□□ -0.48
PABPC1-222	ENST00000523555	XDH	P47989	1333 aa		12.06	□□□□□ -0.48
PABPC1-222	ENST00000523555	PCNT	O95613	3336 aa		12.05	□□□□□ -0.48
PABPC1-222	ENST00000523555	IQCA1L	A6NCM1	817 aa		12.05	□□□□□ -0.48
PABPC1-222	ENST00000523555	SNAP23	O00161	211 aa		12.05	□□□□□ -0.48
PABPC1-222	ENST00000523555	ECE2	O60344	883 aa		12.05	□□□□□ -0.48
PABPC1-222	ENST00000523555	BCAR3	O75815	825 aa		12.05	□□□□□ -0.48
PABPC1-222	ENST00000523555	CT47B1	P0C2W7	299 aa	Predicted RBP	12.05	□□□□□ -0.48
PABPC1-222	ENST00000523555	KLRK1	P26718	216 aa		12.05	□□□□□ -0.48
PABPC1-222	ENST00000523555	GMPS	P49915	693 aa	Predicted RBP	12.05	□□□□□ -0.48
PABPC1-222	ENST00000523555	EAPP	Q56P03	285 aa	Predicted RBP	12.05	□□□□□ -0.48
PABPC1-222	ENST00000523555	TXNRD3	Q86VQ6	643 aa		12.05	□□□□□ -0.48
PABPC1-222	ENST00000523555	ZBTB12	Q9Y330	459 aa	Predicted RBP	12.05	□□□□□ -0.48
PABPC1-222	ENST00000523555	CHMP3	Q9Y3E7	222 aa		12.05	□□□□□ -0.48
PABPC1-222	ENST00000523555	ANKRD18B	A2A2Z9	1011 aa		12.04	□□□□□ -0.48
PABPC1-222	ENST00000523555	PSMD14	O00487	310 aa		12.04	□□□□□ -0.48
PABPC1-222	ENST00000523555	IGHMBP2	P38935	993 aa	Known RBP	12.04	□□□□□ -0.48
PABPC1-222	ENST00000523555	CCT4	P50991	539 aa	Known RBP	12.04	□□□□□ -0.48
PABPC1-222	ENST00000523555	CIAPIN1	Q6FI81	312 aa		12.04	□□□□□ -0.48
PABPC1-222	ENST00000523555	ANKRD44	Q8N8A2	993 aa		12.04	□□□□□ -0.48
PABPC1-222	ENST00000523555	EYA3	Q99504	573 aa		12.04	□□□□□ -0.48
PABPC1-222	ENST00000523555	USP44	Q9H0E7	712 aa		12.04	□□□□□ -0.48
PABPC1-222	ENST00000523555	BICC1	Q9H694	974 aa	Known RBP	12.04	□□□□□ -0.48
PABPC1-222	ENST00000523555	TAF5L	O75529	589 aa		12.03	□□□□□ -0.48
PABPC1-222	ENST00000523555	ATP2B4	P23634	1241 aa		12.03	□□□□□ -0.48
PABPC1-222	ENST00000523555	BRPF1	P55201	1214 aa	Predicted RBP	12.03	□□□□□ -0.48
PABPC1-222	ENST00000523555	CHRND	Q07001	517 aa		12.03	□□□□□ -0.48
PABPC1-222	ENST00000523555	CHADL	Q6NUI6	762 aa		12.03	□□□□□ -0.48
PABPC1-222	ENST00000523555	HELB	Q8NG08	1087 aa	Predicted RBP	12.03	□□□□□ -0.48
PABPC1-222	ENST00000523555	GPRC5D	Q9NZD1	345 aa		12.03	□□□□□ -0.48
PABPC1-222	ENST00000523555	TRPM7	Q96QT4	1865 aa		12.03	□□□□□ -0.48
PABPC1-222	ENST00000523555	ZBED9	Q6R2W3	1325 aa		12.03	□□□□□ -0.48
PABPC1-222	ENST00000523555	FMR1	Q06787	632 aa	Known RBP eCLIP	12.02	□□□□□ -0.49
PABPC1-222	ENST00000523555	IFIT5	Q13325	482 aa	Known RBP	12.02	□□□□□ -0.49
PABPC1-222	ENST00000523555	RABL6	Q3YEC7	729 aa	Predicted RBP	12.02	□□□□□ -0.49
PABPC1-222	ENST00000523555	MAP1S	Q66K74	1059 aa	Predicted RBP	12.02	□□□□□ -0.49
PABPC1-222	ENST00000523555	LDHD	Q86WU2	507 aa		12.02	□□□□□ -0.49
PABPC1-222	ENST00000523555	TRPM4	Q8TD43	1214 aa		12.02	□□□□□ -0.49
PABPC1-222	ENST00000523555	MPHOSPH8	Q99549	860 aa		12.02	□□□□□ -0.49
PABPC1-222	ENST00000523555	PUS3	Q9BZE2	481 aa	Known RBP	12.02	□□□□□ -0.49
PABPC1-222	ENST00000523555	ZC3H12C	Q9C0D7	883 aa	Known RBP	12.02	□□□□□ -0.49
PABPC1-222	ENST00000523555	IRS2	Q9Y4H2	1338 aa		12.02	□□□□□ -0.49
PABPC1-222	ENST00000523555	MED23	Q9ULK4	1368 aa		12.02	□□□□□ -0.49
PABPC1-222	ENST00000523555	EGFR	P00533	1210 aa		12.01	□□□□□ -0.49
PABPC1-222	ENST00000523555	LMOD1	P29536	600 aa	Predicted RBP	12.01	□□□□□ -0.49
PABPC1-222	ENST00000523555	APLP1	P51693	650 aa		12.01	□□□□□ -0.49
PABPC1-222	ENST00000523555	HIRA	P54198	1017 aa	Predicted RBP	12.01	□□□□□ -0.49
PABPC1-222	ENST00000523555	DNAJC5G	Q8N7S2	189 aa		12.01	□□□□□ -0.49
PABPC1-222	ENST00000523555	KLHDC4	Q8TBB5	520 aa		12.01	□□□□□ -0.49
PABPC1-222	ENST00000523555	CLEC11A	Q9Y240	323 aa		12.01	□□□□□ -0.49
PABPC1-222	ENST00000523555	PASK	Q96RG2	1323 aa		12.01	□□□□□ -0.49
PABPC1-222	ENST00000523555	ITGBL1	O95965	494 aa	Predicted RBP	12	□□□□□ -0.49
PABPC1-222	ENST00000523555	TNIP1	Q15025	636 aa		12	□□□□□ -0.49
PABPC1-222	ENST00000523555	CCDC57	Q2TAC2	916 aa		12	□□□□□ -0.49
PABPC1-222	ENST00000523555	MICALL2	Q8IY33	904 aa		12	□□□□□ -0.49
PABPC1-222	ENST00000523555	MXD3	Q9BW11	206 aa		12	□□□□□ -0.49
PABPC1-222	ENST00000523555	CNOT7	Q9UIV1	285 aa	Known RBP	12	□□□□□ -0.49
PABPC1-222	ENST00000523555	ZNF804B	A4D1E1	1349 aa		12	□□□□□ -0.49
PABPC1-222	ENST00000523555	PLIN1	O60240	522 aa		11.99	□□□□□ -0.49
PABPC1-222	ENST00000523555	VIL1	P09327	827 aa	Known RBP	11.99	□□□□□ -0.49
PABPC1-222	ENST00000523555	TRIM27	P14373	513 aa		11.99	□□□□□ -0.49
PABPC1-222	ENST00000523555	LRRC24	Q50LG9	513 aa		11.99	□□□□□ -0.49
PABPC1-222	ENST00000523555	LDHAL6A	Q6ZMR3	332 aa		11.99	□□□□□ -0.49
PABPC1-222	ENST00000523555	SAMD7	Q7Z3H4	446 aa		11.99	□□□□□ -0.49
PABPC1-222	ENST00000523555	PNMA8A	Q86V59	439 aa	Predicted RBP	11.99	□□□□□ -0.49
PABPC1-222	ENST00000523555	FRAT1	Q92837	279 aa	Predicted RBP	11.99	□□□□□ -0.49
PABPC1-222	ENST00000523555	MEIS3	Q99687	375 aa		11.99	□□□□□ -0.49
PABPC1-222	ENST00000523555	API5	Q9BZZ5	524 aa	Known RBP	11.99	□□□□□ -0.49
PABPC1-222	ENST00000523555	ADARB2	Q9NS39	739 aa	Known RBP	11.99	□□□□□ -0.49
PABPC1-222	ENST00000523555	LEMD3	Q9Y2U8	911 aa		11.99	□□□□□ -0.49
PABPC1-222	ENST00000523555	KIF16B	Q96L93	1317 aa		11.99	□□□□□ -0.49
PABPC1-222	ENST00000523555	RFX5	P48382	616 aa	Predicted RBP	11.98	□□□□□ -0.49

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