RNA–Protein interactions for RNA: ENST00000523339.1

NPM1-210, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 268 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-210ENST00000523339 ZMYND10O75800 440 aa5.36□□□□□ -1.55
NPM1-210ENST00000523339 ECE1P42892 770 aa5.36□□□□□ -1.55
NPM1-210ENST00000523339 PTPRNQ16849 979 aa5.36□□□□□ -1.55
NPM1-210ENST00000523339 C4orf48Q5BLP8 95 aa5.36□□□□□ -1.55
NPM1-210ENST00000523339 PRPF38BQ5VTL8 546 aaKnown RBP5.36□□□□□ -1.55
NPM1-210ENST00000523339 LDHDQ86WU2 507 aa5.36□□□□□ -1.55
NPM1-210ENST00000523339 VSIG10Q8N0Z9 540 aa5.36□□□□□ -1.55
NPM1-210ENST00000523339 ZNF511Q8NB15 262 aa5.36□□□□□ -1.55
NPM1-210ENST00000523339 FOXJ1Q92949 421 aa5.36□□□□□ -1.55
NPM1-210ENST00000523339 COG3Q96JB2 828 aa5.36□□□□□ -1.55
NPM1-210ENST00000523339 WDR33Q9C0J8 1336 aaKnown RBP5.36□□□□□ -1.55
NPM1-210ENST00000523339 QRICH2Q9H0J4 1663 aa5.36□□□□□ -1.55
NPM1-210ENST00000523339 TNRC6CQ9HCJ0 1690 aaKnown RBP5.36□□□□□ -1.55
NPM1-210ENST00000523339 DOT1LQ8TEK3 1739 aa5.36□□□□□ -1.55
NPM1-210ENST00000523339 COL18A1P39060 1754 aa5.36□□□□□ -1.55
NPM1-210ENST00000523339 TUBGCP6Q96RT7 1819 aa5.36□□□□□ -1.55
NPM1-210ENST00000523339 C5P01031 1676 aa5.35□□□□□ -1.55
NPM1-210ENST00000523339 NFAT5O94916 1531 aa5.35□□□□□ -1.55
NPM1-210ENST00000523339 CFAP99D6REC4 459 aa5.35□□□□□ -1.55
NPM1-210ENST00000523339 TIMP2P16035 220 aa5.35□□□□□ -1.55
NPM1-210ENST00000523339 SOX10P56693 466 aa5.35□□□□□ -1.55
NPM1-210ENST00000523339 NNTQ13423 1086 aa5.35□□□□□ -1.55
NPM1-210ENST00000523339 NBPF1Q3BBV0 1214 aa5.35□□□□□ -1.55
NPM1-210ENST00000523339 NBPF15Q8N660 670 aa5.35□□□□□ -1.55
NPM1-210ENST00000523339 TTLL6Q8N841 843 aa5.35□□□□□ -1.55
NPM1-210ENST00000523339 KRI1Q8N9T8 703 aaKnown RBP5.35□□□□□ -1.55
NPM1-210ENST00000523339 PIGBQ92521 554 aa5.35□□□□□ -1.55
NPM1-210ENST00000523339 GCC1Q96CN9 775 aa5.35□□□□□ -1.55
NPM1-210ENST00000523339 MCOLN1Q9GZU1 580 aa5.35□□□□□ -1.55
NPM1-210ENST00000523339 TERF2IPQ9NYB0 399 aa5.35□□□□□ -1.55
NPM1-210ENST00000523339 C4BP0C0L5 1744 aa5.34□□□□□ -1.55
NPM1-210ENST00000523339 KIAA1210Q9ULL0 1709 aa5.34□□□□□ -1.55
NPM1-210ENST00000523339 H0YIN7 160 aa5.34□□□□□ -1.55
NPM1-210ENST00000523339 PER1O15534 1290 aaPredicted RBP5.34□□□□□ -1.55
NPM1-210ENST00000523339 DDNO94850 711 aaPredicted RBP5.34□□□□□ -1.55
NPM1-210ENST00000523339 GYS1P13807 737 aa5.34□□□□□ -1.55
NPM1-210ENST00000523339 KCNA3P22001 575 aa5.34□□□□□ -1.55
NPM1-210ENST00000523339 HOXC9P31274 260 aa5.34□□□□□ -1.55
NPM1-210ENST00000523339 GRM5P41594 1212 aa5.34□□□□□ -1.55
NPM1-210ENST00000523339 LYPD8Q6UX82 237 aa5.34□□□□□ -1.55
NPM1-210ENST00000523339 MPNDQ8N594 471 aa5.34□□□□□ -1.55
NPM1-210ENST00000523339 ZSCAN1Q8NBB4 408 aa5.34□□□□□ -1.55
NPM1-210ENST00000523339 ZNF622Q969S3 477 aaKnown RBP eCLIP5.34□□□□□ -1.551e-52■□□□□ 9.5
NPM1-210ENST00000523339 GPR101Q96P66 508 aaPredicted RBP5.34□□□□□ -1.55
NPM1-210ENST00000523339 PURBQ96QR8 312 aaKnown RBP5.34□□□□□ -1.55
NPM1-210ENST00000523339 TBC1D2Q9BYX2 928 aa5.34□□□□□ -1.55
NPM1-210ENST00000523339 ZFAND3Q9H8U3 227 aa5.34□□□□□ -1.55
NPM1-210ENST00000523339 SPG7Q9UQ90 795 aa5.34□□□□□ -1.55
NPM1-210ENST00000523339 CA12O43570 354 aa5.33□□□□□ -1.56
NPM1-210ENST00000523339 VARSP26640 1264 aaKnown RBP5.33□□□□□ -1.56
NPM1-210ENST00000523339 WDR4P57081 412 aaKnown RBP5.33□□□□□ -1.56
NPM1-210ENST00000523339 ITPK1Q13572 414 aa5.33□□□□□ -1.56
NPM1-210ENST00000523339 MTMR2Q13614 643 aa5.33□□□□□ -1.56
NPM1-210ENST00000523339 NBPF6Q5VWK0 638 aa5.33□□□□□ -1.56
NPM1-210ENST00000523339 MRPL14Q6P1L8 145 aaKnown RBP5.33□□□□□ -1.56
NPM1-210ENST00000523339 GIGYF2Q6Y7W6 1299 aaKnown RBP5.33□□□□□ -1.56
NPM1-210ENST00000523339 C2CD5Q86YS7 1000 aa5.33□□□□□ -1.56
NPM1-210ENST00000523339 ZC3H15Q8WU90 426 aaKnown RBP5.33□□□□□ -1.56
NPM1-210ENST00000523339 CAPNS2Q96L46 248 aa5.33□□□□□ -1.56
NPM1-210ENST00000523339 NBPF4Q96M43 638 aa5.33□□□□□ -1.56
NPM1-210ENST00000523339 MAP10Q9P2G4 905 aa5.33□□□□□ -1.56
NPM1-210ENST00000523339 ASAP1Q9ULH1 1129 aa5.33□□□□□ -1.56
NPM1-210ENST00000523339 RGPD5Q99666 1765 aa5.33□□□□□ -1.56
NPM1-210ENST00000523339 LY75O60449 1722 aa5.33□□□□□ -1.56
NPM1-210ENST00000523339 MEGF6O75095 1541 aa5.33□□□□□ -1.56
NPM1-210ENST00000523339 N4BP2Q86UW6 1770 aaPredicted RBP5.32□□□□□ -1.56
NPM1-210ENST00000523339 USP31Q70CQ4 1352 aa5.32□□□□□ -1.56
NPM1-210ENST00000523339 PKD1L3Q7Z443 1732 aa5.32□□□□□ -1.56
NPM1-210ENST00000523339 MAP3K19Q56UN5 1328 aa5.32□□□□□ -1.56
NPM1-210ENST00000523339 RASSF10A6NK89 507 aa5.32□□□□□ -1.56
NPM1-210ENST00000523339 C21orf2O43822 256 aa5.32□□□□□ -1.56
NPM1-210ENST00000523339 NR3C2P08235 984 aa5.32□□□□□ -1.56
NPM1-210ENST00000523339 AMHR2Q16671 573 aa5.32□□□□□ -1.56
NPM1-210ENST00000523339 MAP1SQ66K74 1059 aaPredicted RBP5.32□□□□□ -1.56
NPM1-210ENST00000523339 DESI1Q6ICB0 168 aa5.32□□□□□ -1.56
NPM1-210ENST00000523339 CYP4F22Q6NT55 531 aa5.32□□□□□ -1.56
NPM1-210ENST00000523339 RSBN1LQ6PCB5 846 aaPredicted RBP5.32□□□□□ -1.56
NPM1-210ENST00000523339 PNMA8AQ86V59 439 aaPredicted RBP5.32□□□□□ -1.56
NPM1-210ENST00000523339 CNTROBQ8N137 903 aa5.32□□□□□ -1.56
NPM1-210ENST00000523339 IRF7Q92985 503 aa5.32□□□□□ -1.56
NPM1-210ENST00000523339 CDK15Q96Q40 435 aa5.32□□□□□ -1.56
NPM1-210ENST00000523339 TAOK3Q9H2K8 898 aa5.32□□□□□ -1.56
NPM1-210ENST00000523339 SRP68Q9UHB9 627 aaKnown RBP5.32□□□□□ -1.56
NPM1-210ENST00000523339 HACL1Q9UJ83 578 aa5.32□□□□□ -1.56
NPM1-210ENST00000523339 PASKQ96RG2 1323 aa5.31□□□□□ -1.56
NPM1-210ENST00000523339 SPTLC1O15269 473 aa5.31□□□□□ -1.56
NPM1-210ENST00000523339 PPM1GO15355 546 aaPredicted RBP5.31□□□□□ -1.56
NPM1-210ENST00000523339 CYP27B1O15528 508 aa5.31□□□□□ -1.56
NPM1-210ENST00000523339 RPS6KA4O75676 772 aa5.31□□□□□ -1.56
NPM1-210ENST00000523339 F12P00748 615 aaPredicted RBP5.31□□□□□ -1.56
NPM1-210ENST00000523339 LMOD1P29536 600 aaPredicted RBP5.31□□□□□ -1.56
NPM1-210ENST00000523339 CTHP32929 405 aa5.31□□□□□ -1.56
NPM1-210ENST00000523339 RRS1Q15050 365 aaKnown RBP5.31□□□□□ -1.56
NPM1-210ENST00000523339 BICDL1Q6ZP65 573 aa5.31□□□□□ -1.56
NPM1-210ENST00000523339 NPAS3Q8IXF0 933 aa5.31□□□□□ -1.56
NPM1-210ENST00000523339 ITPKCQ96DU7 683 aa5.31□□□□□ -1.56
NPM1-210ENST00000523339 TAF1DQ9H5J8 278 aaPredicted RBP5.31□□□□□ -1.56
NPM1-210ENST00000523339 CD163L1Q9NR16 1453 aa5.31□□□□□ -1.56
NPM1-210ENST00000523339 USP54Q70EL1 1684 aa5.31□□□□□ -1.56
NPM1-210ENST00000523339 NFKBIEO00221 500 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms