RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 UTRNP46939 3433 aa14.86□□□□□ -0.03
PVT1-215ENST00000522963 SRGAP3O43295 1099 aa14.86□□□□□ -0.03
PVT1-215ENST00000522963 DPP8Q6V1X1 898 aaPredicted RBP14.86□□□□□ -0.03
PVT1-215ENST00000522963 ANKRD18AQ8IVF6 992 aa14.86□□□□□ -0.03
PVT1-215ENST00000522963 SPEF2Q9C093 1822 aa14.86□□□□□ -0.03
PVT1-215ENST00000522963 COL4A1P02462 1669 aa14.86□□□□□ -0.03
PVT1-215ENST00000522963 TIAM2Q8IVF5 1701 aa14.86□□□□□ -0.03
PVT1-215ENST00000522963 IARSP41252 1262 aaKnown RBP14.85□□□□□ -0.03
PVT1-215ENST00000522963 RFX5P48382 616 aaPredicted RBP14.85□□□□□ -0.03
PVT1-215ENST00000522963 POLA2Q14181 598 aa14.85□□□□□ -0.03
PVT1-215ENST00000522963 TMC4Q7Z404 712 aa14.85□□□□□ -0.03
PVT1-215ENST00000522963 SSH3Q8TE77 659 aa14.85□□□□□ -0.03
PVT1-215ENST00000522963 CDC5LQ99459 802 aaKnown RBP14.85□□□□□ -0.03
PVT1-215ENST00000522963 PSMD1Q99460 953 aa14.85□□□□□ -0.03
PVT1-215ENST00000522963 NSFL1CQ9UNZ2 370 aaKnown RBP14.85□□□□□ -0.03
PVT1-215ENST00000522963 ITGA6P23229 1130 aa14.84□□□□□ -0.03
PVT1-215ENST00000522963 GRIPAP1Q4V328 841 aa14.84□□□□□ -0.03
PVT1-215ENST00000522963 LARGE2Q8N3Y3 721 aa14.84□□□□□ -0.03
PVT1-215ENST00000522963 RTL9Q8NET4 1388 aa14.84□□□□□ -0.03
PVT1-215ENST00000522963 C6orf229H3BNL8 230 aa14.83□□□□□ -0.04
PVT1-215ENST00000522963 PPIP5K2O43314 1243 aa14.83□□□□□ -0.04
PVT1-215ENST00000522963 IGHMBP2P38935 993 aaKnown RBP14.83□□□□□ -0.04
PVT1-215ENST00000522963 GPSM2P81274 684 aa14.83□□□□□ -0.04
PVT1-215ENST00000522963 IFIT5Q13325 482 aaKnown RBP14.83□□□□□ -0.04
PVT1-215ENST00000522963 AOC3Q16853 763 aa14.83□□□□□ -0.04
PVT1-215ENST00000522963 CCDC57Q2TAC2 916 aa14.83□□□□□ -0.04
PVT1-215ENST00000522963 SUPT20HQ8NEM7 779 aa14.83□□□□□ -0.04
PVT1-215ENST00000522963 JDP2Q8WYK2 163 aa14.83□□□□□ -0.04
PVT1-215ENST00000522963 ZNF594Q96JF6 807 aaPredicted RBP14.83□□□□□ -0.04
PVT1-215ENST00000522963 ANKIB1Q9P2G1 1089 aa14.83□□□□□ -0.04
PVT1-215ENST00000522963 PA2G4Q9UQ80 394 aaKnown RBP14.83□□□□□ -0.04
PVT1-215ENST00000522963 ANKRD18BA2A2Z9 1011 aa14.82□□□□□ -0.04
PVT1-215ENST00000522963 HMMRO75330 724 aa14.82□□□□□ -0.04
PVT1-215ENST00000522963 IGHDP01880 384 aa14.82□□□□□ -0.04
PVT1-215ENST00000522963 PTPN12Q05209 780 aaKnown RBP14.82□□□□□ -0.04
PVT1-215ENST00000522963 HDAC1Q13547 482 aaPredicted RBP14.82□□□□□ -0.04
PVT1-215ENST00000522963 TAF7LQ5H9L4 462 aa14.82□□□□□ -0.04
PVT1-215ENST00000522963 DPY19L2Q6NUT2 758 aa14.82□□□□□ -0.04
PVT1-215ENST00000522963 KLHDC4Q8TBB5 520 aa14.82□□□□□ -0.04
PVT1-215ENST00000522963 NMRK2Q9NPI5 230 aa14.82□□□□□ -0.04
PVT1-215ENST00000522963 PPP4R2Q9NY27 417 aa14.82□□□□□ -0.04
PVT1-215ENST00000522963 GTF3C3Q9Y5Q9 886 aa14.82□□□□□ -0.04
PVT1-215ENST00000522963 KDM2BQ8NHM5 1336 aa14.82□□□□□ -0.04
PVT1-215ENST00000522963 SNED1Q8TER0 1413 aa14.82□□□□□ -0.04
PVT1-215ENST00000522963 RIMBP2O15034 1052 aa14.81□□□□□ -0.04
PVT1-215ENST00000522963 NIM1KQ8IY84 436 aa14.81□□□□□ -0.04
PVT1-215ENST00000522963 GPR101Q96P66 508 aaPredicted RBP14.81□□□□□ -0.04
PVT1-215ENST00000522963 MPHOSPH8Q99549 860 aa14.81□□□□□ -0.04
PVT1-215ENST00000522963 RRAGCQ9HB90 399 aa14.81□□□□□ -0.04
PVT1-215ENST00000522963 GLTPD2A6NH11 291 aa14.8□□□□□ -0.04
PVT1-215ENST00000522963 RWDD1Q9H446 243 aaPredicted RBP14.8□□□□□ -0.04
PVT1-215ENST00000522963 COPRSQ9NQ92 184 aa14.8□□□□□ -0.04
PVT1-215ENST00000522963 ZC3H4Q9UPT8 1303 aaKnown RBP14.8□□□□□ -0.04
PVT1-215ENST00000522963 LRRC37AA6NMS7 1700 aa14.8□□□□□ -0.04
PVT1-215ENST00000522963 DDNO94850 711 aaPredicted RBP14.79□□□□□ -0.04
PVT1-215ENST00000522963 UFL1O94874 794 aa14.79□□□□□ -0.04
PVT1-215ENST00000522963 EIF6P56537 245 aaKnown RBP14.79□□□□□ -0.04
PVT1-215ENST00000522963 B4GALNT3Q6L9W6 998 aa14.79□□□□□ -0.04
PVT1-215ENST00000522963 PUS3Q9BZE2 481 aaKnown RBP14.79□□□□□ -0.04
PVT1-215ENST00000522963 ZNF541Q9H0D2 1346 aa14.79□□□□□ -0.04
PVT1-215ENST00000522963 SIL1Q9H173 461 aa14.79□□□□□ -0.04
PVT1-215ENST00000522963 BSDC1Q9NW68 430 aaPredicted RBP14.79□□□□□ -0.04
PVT1-215ENST00000522963 POLLQ9UGP5 575 aa14.79□□□□□ -0.04
PVT1-215ENST00000522963 GGA1Q9UJY5 639 aa14.79□□□□□ -0.04
PVT1-215ENST00000522963 NOP58Q9Y2X3 529 aaKnown RBP14.79□□□□□ -0.04
PVT1-215ENST00000522963 G3V3G9 751 aa14.78□□□□□ -0.04
PVT1-215ENST00000522963 SURF6O75683 361 aaKnown RBP14.78□□□□□ -0.04
PVT1-215ENST00000522963 WASHC4Q2M389 1173 aa14.78□□□□□ -0.04
PVT1-215ENST00000522963 LRRC24Q50LG9 513 aa14.78□□□□□ -0.04
PVT1-215ENST00000522963 DCAF8Q5TAQ9 597 aa14.78□□□□□ -0.04
PVT1-215ENST00000522963 TBC1D16Q8TBP0 767 aa14.78□□□□□ -0.04
PVT1-215ENST00000522963 CCDC136Q96JN2 1154 aa14.78□□□□□ -0.04
PVT1-215ENST00000522963 EYA3Q99504 573 aa14.78□□□□□ -0.04
PVT1-215ENST00000522963 RTFDC1Q9BY42 306 aaPredicted RBP14.78□□□□□ -0.04
PVT1-215ENST00000522963 DCTPP1Q9H773 170 aa14.78□□□□□ -0.04
PVT1-215ENST00000522963 MINPP1Q9UNW1 487 aa14.78□□□□□ -0.04
PVT1-215ENST00000522963 EXOC6BQ9Y2D4 811 aa14.78□□□□□ -0.04
PVT1-215ENST00000522963 GJA3Q9Y6H8 435 aa14.78□□□□□ -0.04
PVT1-215ENST00000522963 COL4A5P29400 1685 aa14.77□□□□□ -0.04
PVT1-215ENST00000522963 XDHP47989 1333 aa14.77□□□□□ -0.04
PVT1-215ENST00000522963 EYA2O00167 538 aa14.77□□□□□ -0.05
PVT1-215ENST00000522963 KIAA2012Q0VF49 1180 aa14.77□□□□□ -0.05
PVT1-215ENST00000522963 LDHAL6AQ6ZMR3 332 aa14.77□□□□□ -0.05
PVT1-215ENST00000522963 ATG9AQ7Z3C6 839 aa14.77□□□□□ -0.05
PVT1-215ENST00000522963 C16orf71Q8IYS4 520 aaPredicted RBP14.77□□□□□ -0.05
PVT1-215ENST00000522963 FZD9O00144 591 aa14.76□□□□□ -0.05
PVT1-215ENST00000522963 CIAO1O76071 339 aa14.76□□□□□ -0.05
PVT1-215ENST00000522963 G3BP1Q13283 466 aaKnown RBP eCLIP14.76□□□□□ -0.05
PVT1-215ENST00000522963 DOK7Q18PE1 504 aa14.76□□□□□ -0.05
PVT1-215ENST00000522963 HELBQ8NG08 1087 aaPredicted RBP14.76□□□□□ -0.05
PVT1-215ENST00000522963 ZC3H12CQ9C0D7 883 aaKnown RBP14.76□□□□□ -0.05
PVT1-215ENST00000522963 DBNDD1Q9H9R9 158 aa14.76□□□□□ -0.05
PVT1-215ENST00000522963 CNNM1Q9NRU3 951 aa14.76□□□□□ -0.05
PVT1-215ENST00000522963 FBXO3Q9UK99 471 aa14.76□□□□□ -0.05
PVT1-215ENST00000522963 RIPOR2Q9Y4F9 1068 aa14.76□□□□□ -0.05
PVT1-215ENST00000522963 DUOX1Q9NRD9 1551 aa14.76□□□□□ -0.05
PVT1-215ENST00000522963 WTIPA6NIX2 430 aaPredicted RBP14.75□□□□□ -0.05
PVT1-215ENST00000522963 KIF3CO14782 793 aa14.75□□□□□ -0.05
PVT1-215ENST00000522963 ATP2B4P23634 1241 aa14.75□□□□□ -0.05
PVT1-215ENST00000522963 KCNJ4P48050 445 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms