RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 NBPF20Q3BBV1 942 aa9.24□□□□□ -0.93
VPS13B-211ENST00000522802 TREML4Q6UXN2 200 aa9.24□□□□□ -0.93
VPS13B-211ENST00000522802 ARHGEF25Q86VW2 580 aa9.24□□□□□ -0.93
VPS13B-211ENST00000522802 PHTF2Q8N3S3 785 aa9.24□□□□□ -0.93
VPS13B-211ENST00000522802 GLMNQ92990 594 aa9.24□□□□□ -0.93
VPS13B-211ENST00000522802 WDR90Q96KV7 1748 aa9.24□□□□□ -0.93
VPS13B-211ENST00000522802 C5P01031 1676 aa9.23□□□□□ -0.93
VPS13B-211ENST00000522802 USP54Q70EL1 1684 aa9.23□□□□□ -0.93
VPS13B-211ENST00000522802 MON2Q7Z3U7 1717 aa9.23□□□□□ -0.93
VPS13B-211ENST00000522802 SMPD1P17405 629 aa9.23□□□□□ -0.93
VPS13B-211ENST00000522802 NR5A1Q13285 461 aa9.23□□□□□ -0.93
VPS13B-211ENST00000522802 GRIN3BO60391 1043 aa9.22□□□□□ -0.93
VPS13B-211ENST00000522802 SLC16A10Q8TF71 515 aa9.22□□□□□ -0.93
VPS13B-211ENST00000522802 CICQ96RK0 1608 aaPredicted RBP9.22□□□□□ -0.93
VPS13B-211ENST00000522802 NSD2O96028 1365 aa9.22□□□□□ -0.93
VPS13B-211ENST00000522802 TOGARAM1Q9Y4F4 1720 aa9.22□□□□□ -0.93
VPS13B-211ENST00000522802 MSL1Q68DK7 614 aa9.21□□□□□ -0.94
VPS13B-211ENST00000522802 CALR3Q96L12 384 aaKnown RBP9.21□□□□□ -0.94
VPS13B-211ENST00000522802 TFCP2L1Q9NZI6 479 aa9.21□□□□□ -0.94
VPS13B-211ENST00000522802 CABP1Q9NZU7 370 aa9.21□□□□□ -0.94
VPS13B-211ENST00000522802 DACH1Q9UI36 760 aa9.2□□□□□ -0.94
VPS13B-211ENST00000522802 WASF2Q9Y6W5 498 aa9.2□□□□□ -0.94
VPS13B-211ENST00000522802 FAM208AQ9UK61 1670 aaKnown RBP9.2□□□□□ -0.94
VPS13B-211ENST00000522802 TAF1LQ8IZX4 1826 aa9.19□□□□□ -0.94
VPS13B-211ENST00000522802 NR3C2P08235 984 aa9.19□□□□□ -0.94
VPS13B-211ENST00000522802 FSHRP23945 695 aa9.19□□□□□ -0.94
VPS13B-211ENST00000522802 INTS6LQ5JSJ4 861 aaKnown RBP9.19□□□□□ -0.94
VPS13B-211ENST00000522802 SLC27A3Q5K4L6 730 aa9.19□□□□□ -0.94
VPS13B-211ENST00000522802 RNF20Q5VTR2 975 aa9.19□□□□□ -0.94
VPS13B-211ENST00000522802 C1orf115Q9H7X2 142 aa9.19□□□□□ -0.94
VPS13B-211ENST00000522802 WWC3Q9ULE0 1092 aa9.19□□□□□ -0.94
VPS13B-211ENST00000522802 CENPJQ9HC77 1338 aaPredicted RBP9.19□□□□□ -0.94
VPS13B-211ENST00000522802 RAB3GAP2Q9H2M9 1393 aa9.19□□□□□ -0.94
VPS13B-211ENST00000522802 RGPD2P0DJD1 1756 aa9.18□□□□□ -0.94
VPS13B-211ENST00000522802 IL2RBP14784 551 aa9.18□□□□□ -0.94
VPS13B-211ENST00000522802 NNTQ13423 1086 aa9.18□□□□□ -0.94
VPS13B-211ENST00000522802 NBPF1Q3BBV0 1214 aa9.18□□□□□ -0.94
VPS13B-211ENST00000522802 SLFNL1Q499Z3 407 aa9.18□□□□□ -0.94
VPS13B-211ENST00000522802 COL13A1Q5TAT6 717 aaPredicted RBP9.18□□□□□ -0.94
VPS13B-211ENST00000522802 TTC21BQ7Z4L5 1316 aa9.18□□□□□ -0.94
VPS13B-211ENST00000522802 DNAJC5GQ8N7S2 189 aa9.18□□□□□ -0.94
VPS13B-211ENST00000522802 KCNH5Q8NCM2 988 aa9.18□□□□□ -0.94
VPS13B-211ENST00000522802 UCN2Q96RP3 112 aa9.18□□□□□ -0.94
VPS13B-211ENST00000522802 KIAA1551Q9HCM1 1747 aa9.18□□□□□ -0.94
VPS13B-211ENST00000522802 NLRP2Q9NX02 1062 aa9.18□□□□□ -0.94
VPS13B-211ENST00000522802 TSGA10IPQ3SY00 556 aa9.17□□□□□ -0.94
VPS13B-211ENST00000522802 COL23A1Q86Y22 540 aaPredicted RBP9.17□□□□□ -0.94
VPS13B-211ENST00000522802 CCDC116Q8IYX3 515 aa9.17□□□□□ -0.94
VPS13B-211ENST00000522802 NFATC2IPQ8NCF5 419 aa9.17□□□□□ -0.94
VPS13B-211ENST00000522802 KLF16Q9BXK1 252 aaPredicted RBP9.17□□□□□ -0.94
VPS13B-211ENST00000522802 ANKRD36BQ8N2N9 1353 aa9.16□□□□□ -0.94
VPS13B-211ENST00000522802 ERVH48-1M5A8F1 160 aa9.16□□□□□ -0.94
VPS13B-211ENST00000522802 PIK3CDO00329 1044 aa9.16□□□□□ -0.94
VPS13B-211ENST00000522802 DHX9Q08211 1270 aaKnown RBP9.16□□□□□ -0.94
VPS13B-211ENST00000522802 CRIPAKQ8N1N5 446 aa9.16□□□□□ -0.94
VPS13B-211ENST00000522802 HPS1Q92902 700 aa9.16□□□□□ -0.94
VPS13B-211ENST00000522802 CCDC85AQ96PX6 553 aaPredicted RBP9.16□□□□□ -0.94
VPS13B-211ENST00000522802 UBR3Q6ZT12 1888 aa9.16□□□□□ -0.94
VPS13B-211ENST00000522802 IGSF1Q8N6C5 1336 aa9.15□□□□□ -0.94
VPS13B-211ENST00000522802 TTC21AQ8NDW8 1320 aa9.15□□□□□ -0.94
VPS13B-211ENST00000522802 C4BP0C0L5 1744 aa9.15□□□□□ -0.94
VPS13B-211ENST00000522802 HTRA3P83110 453 aa9.15□□□□□ -0.94
VPS13B-211ENST00000522802 RNF135Q8IUD6 432 aa9.15□□□□□ -0.94
VPS13B-211ENST00000522802 ANKRD24Q8TF21 1146 aa9.15□□□□□ -0.94
VPS13B-211ENST00000522802 SYTL4Q96C24 671 aaPredicted RBP9.15□□□□□ -0.94
VPS13B-211ENST00000522802 MEGF6O75095 1541 aa9.15□□□□□ -0.95
VPS13B-211ENST00000522802 PKD1L3Q7Z443 1732 aa9.14□□□□□ -0.95
VPS13B-211ENST00000522802 AVPP01185 164 aa9.14□□□□□ -0.95
VPS13B-211ENST00000522802 PPP1R26Q5T8A7 1209 aaPredicted RBP9.14□□□□□ -0.95
VPS13B-211ENST00000522802 TBC1D9Q6ZT07 1266 aa9.14□□□□□ -0.95
VPS13B-211ENST00000522802 DDX54Q8TDD1 881 aaKnown RBP9.14□□□□□ -0.95
VPS13B-211ENST00000522802 GMPR2Q9P2T1 348 aaKnown RBP9.14□□□□□ -0.95
VPS13B-211ENST00000522802 CCNL1Q9UK58 526 aaPredicted RBP9.14□□□□□ -0.95
VPS13B-211ENST00000522802 CD2APQ9Y5K6 639 aa9.14□□□□□ -0.95
VPS13B-211ENST00000522802 EMILIN1Q9Y6C2 1016 aa9.14□□□□□ -0.95
VPS13B-211ENST00000522802 KIF13BQ9NQT8 1826 aa9.14□□□□□ -0.95
VPS13B-211ENST00000522802 N4BP2Q86UW6 1770 aaPredicted RBP9.14□□□□□ -0.95
VPS13B-211ENST00000522802 CD163L1Q9NR16 1453 aa9.14□□□□□ -0.95
VPS13B-211ENST00000522802 KTN1Q86UP2 1357 aaKnown RBP9.13□□□□□ -0.95
VPS13B-211ENST00000522802 RAB15P59190 212 aa9.13□□□□□ -0.95
VPS13B-211ENST00000522802 MAP7D1Q3KQU3 841 aa9.13□□□□□ -0.95
VPS13B-211ENST00000522802 AMIGO3Q86WK7 504 aa9.13□□□□□ -0.95
VPS13B-211ENST00000522802 PPP1R12CQ9BZL4 782 aa9.13□□□□□ -0.95
VPS13B-211ENST00000522802 TMPRSS4Q9NRS4 437 aa9.13□□□□□ -0.95
VPS13B-211ENST00000522802 TFIP11Q9UBB9 837 aaKnown RBP9.13□□□□□ -0.95
VPS13B-211ENST00000522802 PALM3A6NDB9 673 aaPredicted RBP9.12□□□□□ -0.95
VPS13B-211ENST00000522802 ATP9BO43861 1147 aa9.12□□□□□ -0.95
VPS13B-211ENST00000522802 TNS4Q8IZW8 715 aa9.12□□□□□ -0.95
VPS13B-211ENST00000522802 PLPP7Q8NBV4 271 aa9.12□□□□□ -0.95
VPS13B-211ENST00000522802 SERPINA10Q9UK55 444 aa9.12□□□□□ -0.95
VPS13B-211ENST00000522802 BRCA1P38398 1863 aaKnown RBP9.12□□□□□ -0.95
VPS13B-211ENST00000522802 USP31Q70CQ4 1352 aa9.12□□□□□ -0.95
VPS13B-211ENST00000522802 PXDNLA1KZ92 1463 aa9.11□□□□□ -0.95
VPS13B-211ENST00000522802 AXIN1O15169 862 aa9.11□□□□□ -0.95
VPS13B-211ENST00000522802 WFS1O76024 890 aa9.11□□□□□ -0.95
VPS13B-211ENST00000522802 SKIP12755 728 aa9.11□□□□□ -0.95
VPS13B-211ENST00000522802 TIMP2P16035 220 aa9.11□□□□□ -0.95
VPS13B-211ENST00000522802 PRELPP51888 382 aa9.11□□□□□ -0.95
VPS13B-211ENST00000522802 NME9Q86XW9 330 aa9.11□□□□□ -0.95
VPS13B-211ENST00000522802 ITPKCQ96DU7 683 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms