RNA–Protein interactions for RNA: ENST00000522515.5

LSM1-204, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 3

Gene LSM1, Length 1,568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-204ENST00000522515 RIPOR2Q9Y4F9 1068 aa20.17■□□□□ 0.82
LSM1-204ENST00000522515 BRCA1P38398 1863 aaKnown RBP20.17■□□□□ 0.82
LSM1-204ENST00000522515 CIAO1O76071 339 aa20.17■□□□□ 0.82
LSM1-204ENST00000522515 G3BP1Q13283 466 aaKnown RBP eCLIP20.17■□□□□ 0.82
LSM1-204ENST00000522515 APBB1O00213 710 aa20.15■□□□□ 0.82
LSM1-204ENST00000522515 SASH1O94885 1247 aa20.15■□□□□ 0.82
LSM1-204ENST00000522515 IL15P40933 162 aaPredicted RBP20.15■□□□□ 0.82
LSM1-204ENST00000522515 OS9Q13438 667 aaPredicted RBP20.15■□□□□ 0.82
LSM1-204ENST00000522515 MINPP1Q9UNW1 487 aa20.15■□□□□ 0.82
LSM1-204ENST00000522515 ATP6V0A2Q9Y487 856 aa20.15■□□□□ 0.82
LSM1-204ENST00000522515 HSP90AB4PQ58FF6 505 aa20.14■□□□□ 0.81
LSM1-204ENST00000522515 OLFM4Q6UX06 510 aa20.14■□□□□ 0.81
LSM1-204ENST00000522515 TMC4Q7Z404 712 aa20.14■□□□□ 0.81
LSM1-204ENST00000522515 SMC5Q8IY18 1101 aa20.14■□□□□ 0.81
LSM1-204ENST00000522515 GCC1Q96CN9 775 aa20.14■□□□□ 0.81
LSM1-204ENST00000522515 ZNF219Q9P2Y4 722 aaPredicted RBP20.14■□□□□ 0.81
LSM1-204ENST00000522515 CHRNDQ07001 517 aa20.13■□□□□ 0.81
LSM1-204ENST00000522515 DALRD3Q5D0E6 543 aaKnown RBP20.13■□□□□ 0.81
LSM1-204ENST00000522515 SP8Q8IXZ3 490 aa20.13■□□□□ 0.81
LSM1-204ENST00000522515 HELBQ8NG08 1087 aaPredicted RBP20.13■□□□□ 0.81
LSM1-204ENST00000522515 C7orf43Q8WVR3 580 aa20.13■□□□□ 0.81
LSM1-204ENST00000522515 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.13■□□□□ 0.81
LSM1-204ENST00000522515 KDM2BQ8NHM5 1336 aa20.13■□□□□ 0.81
LSM1-204ENST00000522515 LRRC37AA6NMS7 1700 aa20.13■□□□□ 0.81
LSM1-204ENST00000522515 METTL24Q5JXM2 366 aa20.12■□□□□ 0.81
LSM1-204ENST00000522515 GOLGB1Q14789 3259 aaKnown RBP20.12■□□□□ 0.81
LSM1-204ENST00000522515 MROH5Q6ZUA9 1318 aa20.12■□□□□ 0.81
LSM1-204ENST00000522515 C21orf2O43822 256 aa20.12■□□□□ 0.81
LSM1-204ENST00000522515 RAB11FIP3O75154 756 aa20.12■□□□□ 0.81
LSM1-204ENST00000522515 TAF5LO75529 589 aa20.12■□□□□ 0.81
LSM1-204ENST00000522515 TFCP2Q12800 502 aa20.12■□□□□ 0.81
LSM1-204ENST00000522515 VGLL2Q8N8G2 317 aa20.12■□□□□ 0.81
LSM1-204ENST00000522515 RHPN1Q8TCX5 695 aa20.12■□□□□ 0.81
LSM1-204ENST00000522515 ERC1Q8IUD2 1116 aa20.11■□□□□ 0.81
LSM1-204ENST00000522515 CEP126Q9P2H0 1117 aa20.11■□□□□ 0.81
LSM1-204ENST00000522515 BCS1LQ9Y276 419 aa20.11■□□□□ 0.81
LSM1-204ENST00000522515 A0A1B0GUL6 1792 aa20.11■□□□□ 0.81
LSM1-204ENST00000522515 GPSM2P81274 684 aa20.1■□□□□ 0.81
LSM1-204ENST00000522515 KIF1BPQ96EK5 621 aa20.1■□□□□ 0.81
LSM1-204ENST00000522515 WTIPA6NIX2 430 aaPredicted RBP20.09■□□□□ 0.81
LSM1-204ENST00000522515 SMARCA5O60264 1052 aaPredicted RBP20.09■□□□□ 0.81
LSM1-204ENST00000522515 PDE8BO95263 885 aa20.09■□□□□ 0.81
LSM1-204ENST00000522515 CENPQQ7L2Z9 268 aaPredicted RBP20.09■□□□□ 0.81
LSM1-204ENST00000522515 LRRCC1Q9C099 1032 aa20.09■□□□□ 0.81
LSM1-204ENST00000522515 ANKRD2Q9GZV1 360 aa20.09■□□□□ 0.81
LSM1-204ENST00000522515 IL1RAPL2Q9NP60 686 aa20.09■□□□□ 0.81
LSM1-204ENST00000522515 ANKIB1Q9P2G1 1089 aa20.09■□□□□ 0.81
LSM1-204ENST00000522515 NSFL1CQ9UNZ2 370 aaKnown RBP20.09■□□□□ 0.81
LSM1-204ENST00000522515 SNAP23O00161 211 aa20.08■□□□□ 0.81
LSM1-204ENST00000522515 ANKRD45Q5TZF3 282 aa20.08■□□□□ 0.81
LSM1-204ENST00000522515 TMX4Q9H1E5 349 aaPredicted RBP20.08■□□□□ 0.81
LSM1-204ENST00000522515 BCL11AQ9H165 835 aa20.08■□□□□ 0.8
LSM1-204ENST00000522515 XDHP47989 1333 aa20.07■□□□□ 0.8
LSM1-204ENST00000522515 SNED1Q8TER0 1413 aa20.07■□□□□ 0.8
LSM1-204ENST00000522515 LTBP1Q14766 1721 aa20.07■□□□□ 0.8
LSM1-204ENST00000522515 CC2D2BQ6DHV5 1058 aa20.07■□□□□ 0.8
LSM1-204ENST00000522515 MPNDQ8N594 471 aa20.07■□□□□ 0.8
LSM1-204ENST00000522515 PODXL2Q9NZ53 605 aa20.07■□□□□ 0.8
LSM1-204ENST00000522515 CCDC93Q567U6 631 aa20.06■□□□□ 0.8
LSM1-204ENST00000522515 ARFGEF1Q9Y6D6 1849 aa20.05■□□□□ 0.8
LSM1-204ENST00000522515 FGFR2P21802 821 aa20.05■□□□□ 0.8
LSM1-204ENST00000522515 NUCB1Q02818 461 aa20.05■□□□□ 0.8
LSM1-204ENST00000522515 TNNI3KQ59H18 835 aa20.05■□□□□ 0.8
LSM1-204ENST00000522515 DPP8Q6V1X1 898 aaPredicted RBP20.05■□□□□ 0.8
LSM1-204ENST00000522515 EAF2Q96CJ1 260 aaPredicted RBP20.05■□□□□ 0.8
LSM1-204ENST00000522515 GPR108Q9NPR9 543 aa20.05■□□□□ 0.8
LSM1-204ENST00000522515 POLLQ9UGP5 575 aa20.05■□□□□ 0.8
LSM1-204ENST00000522515 FPGT-TNNI3KV9GXZ4 949 aa20.05■□□□□ 0.8
LSM1-204ENST00000522515 DUOX1Q9NRD9 1551 aa20.05■□□□□ 0.8
LSM1-204ENST00000522515 TIMM10P62072 90 aa20.04■□□□□ 0.8
LSM1-204ENST00000522515 PUM3Q15397 648 aaKnown RBP20.04■□□□□ 0.8
LSM1-204ENST00000522515 ATP2B3Q16720 1220 aa20.04■□□□□ 0.8
LSM1-204ENST00000522515 SOGA3Q5TF21 947 aa20.04■□□□□ 0.8
LSM1-204ENST00000522515 CLASRPQ8N2M8 674 aaKnown RBP20.04■□□□□ 0.8
LSM1-204ENST00000522515 TBC1D16Q8TBP0 767 aa20.04■□□□□ 0.8
LSM1-204ENST00000522515 GGA1Q9UJY5 639 aa20.04■□□□□ 0.8
LSM1-204ENST00000522515 AKAP2Q9Y2D5 859 aa20.04■□□□□ 0.8
LSM1-204ENST00000522515 LEMD3Q9Y2U8 911 aa20.04■□□□□ 0.8
LSM1-204ENST00000522515 ZNF804BA4D1E1 1349 aa20.04■□□□□ 0.8
LSM1-204ENST00000522515 ZNF609O15014 1411 aa20.04■□□□□ 0.8
LSM1-204ENST00000522515 A0A1B0GUL7 405 aa20.04■□□□□ 0.8
LSM1-204ENST00000522515 UFL1O94874 794 aa20.04■□□□□ 0.8
LSM1-204ENST00000522515 ATP2B4P23634 1241 aa20.04■□□□□ 0.8
LSM1-204ENST00000522515 KCNJ4P48050 445 aa20.04■□□□□ 0.8
LSM1-204ENST00000522515 UBE4AQ14139 1066 aa20.04■□□□□ 0.8
LSM1-204ENST00000522515 CHD1LQ86WJ1 897 aa20.04■□□□□ 0.8
LSM1-204ENST00000522515 LNPKQ9C0E8 428 aa20.04■□□□□ 0.8
LSM1-204ENST00000522515 RTKN2Q8IZC4 609 aa20.03■□□□□ 0.8
LSM1-204ENST00000522515 PELP1Q8IZL8 1130 aaKnown RBP20.03■□□□□ 0.8
LSM1-204ENST00000522515 LPIN2Q92539 896 aa20.03■□□□□ 0.8
LSM1-204ENST00000522515 NEUROD6Q96NK8 337 aa20.03■□□□□ 0.8
LSM1-204ENST00000522515 GPR101Q96P66 508 aaPredicted RBP20.03■□□□□ 0.8
LSM1-204ENST00000522515 ZBTB47Q9UFB7 747 aaPredicted RBP20.03■□□□□ 0.8
LSM1-204ENST00000522515 C6orf229H3BNL8 230 aa20.02■□□□□ 0.8
LSM1-204ENST00000522515 YBX3P16989 372 aaKnown RBP eCLIP20.02■□□□□ 0.8
LSM1-204ENST00000522515 GRIPAP1Q4V328 841 aa20.02■□□□□ 0.8
LSM1-204ENST00000522515 AACSQ86V21 672 aa20.02■□□□□ 0.8
LSM1-204ENST00000522515 C16orf71Q8IYS4 520 aaPredicted RBP20.02■□□□□ 0.8
LSM1-204ENST00000522515 CCDC8Q9H0W5 538 aaPredicted RBP20.02■□□□□ 0.8
LSM1-204ENST00000522515 KLRK1P26718 216 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms