RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 PHAXQ9H814 394 aaKnown RBP19.87■□□□□ 0.77
TRAPPC9-213ENST00000522504 ASTN2O75129 1339 aaPredicted RBP19.86■□□□□ 0.77
TRAPPC9-213ENST00000522504 CA12O43570 354 aa19.86■□□□□ 0.77
TRAPPC9-213ENST00000522504 ZNF853P0CG23 659 aa19.86■□□□□ 0.77
TRAPPC9-213ENST00000522504 MCOLN1Q9GZU1 580 aa19.86■□□□□ 0.77
TRAPPC9-213ENST00000522504 FAM155AB1AL88 458 aaPredicted RBP19.85■□□□□ 0.77
TRAPPC9-213ENST00000522504 RPS12P25398 132 aaKnown RBP19.85■□□□□ 0.77
TRAPPC9-213ENST00000522504 ZBTB38Q8NAP3 1195 aaPredicted RBP19.85■□□□□ 0.77
TRAPPC9-213ENST00000522504 JARID2Q92833 1246 aaPredicted RBP19.85■□□□□ 0.77
TRAPPC9-213ENST00000522504 TNRC18O15417 2968 aaPredicted RBP19.84■□□□□ 0.77
TRAPPC9-213ENST00000522504 NOGQ13253 232 aa19.84■□□□□ 0.77
TRAPPC9-213ENST00000522504 RIC3Q7Z5B4 369 aa19.84■□□□□ 0.77
TRAPPC9-213ENST00000522504 EYA3Q99504 573 aa19.84■□□□□ 0.77
TRAPPC9-213ENST00000522504 PODXL2Q9NZ53 605 aa19.84■□□□□ 0.77
TRAPPC9-213ENST00000522504 ELL2O00472 640 aaPredicted RBP19.83■□□□□ 0.77
TRAPPC9-213ENST00000522504 VIL1P09327 827 aaKnown RBP19.83■□□□□ 0.77
TRAPPC9-213ENST00000522504 MYD88Q99836 296 aa19.83■□□□□ 0.77
TRAPPC9-213ENST00000522504 GBA2Q9HCG7 927 aaPredicted RBP19.83■□□□□ 0.77
TRAPPC9-213ENST00000522504 SCN9AQ15858 1988 aa19.83■□□□□ 0.76
TRAPPC9-213ENST00000522504 CASP8AP2Q9UKL3 1982 aa19.83■□□□□ 0.76
TRAPPC9-213ENST00000522504 UFL1O94874 794 aa19.82■□□□□ 0.76
TRAPPC9-213ENST00000522504 RGS19P49795 217 aa19.82■□□□□ 0.76
TRAPPC9-213ENST00000522504 KIF4BQ2VIQ3 1234 aa19.82■□□□□ 0.76
TRAPPC9-213ENST00000522504 RGMBQ6NW40 437 aa19.82■□□□□ 0.76
TRAPPC9-213ENST00000522504 CCDC85AQ96PX6 553 aaPredicted RBP19.82■□□□□ 0.76
TRAPPC9-213ENST00000522504 ZC3H12CQ9C0D7 883 aaKnown RBP19.82■□□□□ 0.76
TRAPPC9-213ENST00000522504 GOLGA2Q08379 1002 aa19.81■□□□□ 0.76
TRAPPC9-213ENST00000522504 C8orf58Q8NAV2 365 aa19.81■□□□□ 0.76
TRAPPC9-213ENST00000522504 DCPSQ96C86 337 aaKnown RBP19.81■□□□□ 0.76
TRAPPC9-213ENST00000522504 GGA3Q9NZ52 723 aa19.81■□□□□ 0.76
TRAPPC9-213ENST00000522504 WTIPA6NIX2 430 aaPredicted RBP19.8■□□□□ 0.76
TRAPPC9-213ENST00000522504 APAF1O14727 1248 aa19.8■□□□□ 0.76
TRAPPC9-213ENST00000522504 C2orf69Q8N8R5 385 aa19.8■□□□□ 0.76
TRAPPC9-213ENST00000522504 IFT57Q9NWB7 429 aa19.8■□□□□ 0.76
TRAPPC9-213ENST00000522504 ANKIB1Q9P2G1 1089 aa19.8■□□□□ 0.76
TRAPPC9-213ENST00000522504 POLR2AP24928 1970 aaKnown RBP19.79■□□□□ 0.76
TRAPPC9-213ENST00000522504 PCCAP05165 728 aaPredicted RBP19.79■□□□□ 0.76
TRAPPC9-213ENST00000522504 KIF23Q02241 960 aaPredicted RBP19.79■□□□□ 0.76
TRAPPC9-213ENST00000522504 MLLT1Q03111 559 aaPredicted RBP19.79■□□□□ 0.76
TRAPPC9-213ENST00000522504 DGKZQ13574 1117 aa19.79■□□□□ 0.76
TRAPPC9-213ENST00000522504 GGA1Q9UJY5 639 aa19.79■□□□□ 0.76
TRAPPC9-213ENST00000522504 ZNF157P51786 506 aaPredicted RBP19.78■□□□□ 0.76
TRAPPC9-213ENST00000522504 ZNF280AP59817 542 aaPredicted RBP19.78■□□□□ 0.76
TRAPPC9-213ENST00000522504 CCDC191Q8NCU4 936 aa19.78■□□□□ 0.76
TRAPPC9-213ENST00000522504 CCDC152Q4G0S7 254 aa19.77■□□□□ 0.76
TRAPPC9-213ENST00000522504 RSBN1LQ6PCB5 846 aaPredicted RBP19.77■□□□□ 0.76
TRAPPC9-213ENST00000522504 CDCA5Q96FF9 252 aa19.77■□□□□ 0.76
TRAPPC9-213ENST00000522504 GMLQ99445 158 aa19.77■□□□□ 0.76
TRAPPC9-213ENST00000522504 CWC25Q9NXE8 425 aaPredicted RBP19.77■□□□□ 0.76
TRAPPC9-213ENST00000522504 PDE8AO60658 829 aa19.76■□□□□ 0.75
TRAPPC9-213ENST00000522504 SCARF1Q14162 830 aa19.76■□□□□ 0.75
TRAPPC9-213ENST00000522504 ANGEL2Q5VTE6 544 aaKnown RBP19.76■□□□□ 0.75
TRAPPC9-213ENST00000522504 SULF1Q8IWU6 871 aa19.76■□□□□ 0.75
TRAPPC9-213ENST00000522504 CCDC102AQ96A19 550 aa19.76■□□□□ 0.75
TRAPPC9-213ENST00000522504 METTL22Q9BUU2 404 aaPredicted RBP19.76■□□□□ 0.75
TRAPPC9-213ENST00000522504 PRKRIP1Q9H875 184 aaPredicted RBP19.76■□□□□ 0.75
TRAPPC9-213ENST00000522504 RNF186Q9NXI6 227 aa19.76■□□□□ 0.75
TRAPPC9-213ENST00000522504 SCAF8Q9UPN6 1271 aaKnown RBP19.76■□□□□ 0.75
TRAPPC9-213ENST00000522504 ZNF609O15014 1411 aa19.76■□□□□ 0.75
TRAPPC9-213ENST00000522504 G3V3G9 751 aa19.75■□□□□ 0.75
TRAPPC9-213ENST00000522504 SLC10A3P09131 477 aa19.75■□□□□ 0.75
TRAPPC9-213ENST00000522504 GNAI1P63096 354 aa19.75■□□□□ 0.75
TRAPPC9-213ENST00000522504 DCAF8Q5TAQ9 597 aa19.75■□□□□ 0.75
TRAPPC9-213ENST00000522504 TSPYL6Q8N831 410 aa19.75■□□□□ 0.75
TRAPPC9-213ENST00000522504 TRPA1O75762 1119 aa19.74■□□□□ 0.75
TRAPPC9-213ENST00000522504 IGKV5-2P06315 115 aa19.74■□□□□ 0.75
TRAPPC9-213ENST00000522504 AGBL3Q8NEM8 1001 aa19.74■□□□□ 0.75
TRAPPC9-213ENST00000522504 CSRNP1Q96S65 589 aa19.74■□□□□ 0.75
TRAPPC9-213ENST00000522504 MAP3K2Q9Y2U5 619 aa19.74■□□□□ 0.75
TRAPPC9-213ENST00000522504 XDHP47989 1333 aa19.74■□□□□ 0.75
TRAPPC9-213ENST00000522504 HSP90B1P14625 803 aaKnown RBP19.73■□□□□ 0.75
TRAPPC9-213ENST00000522504 ANKRD18AQ8IVF6 992 aa19.73■□□□□ 0.75
TRAPPC9-213ENST00000522504 SAGE1Q9NXZ1 904 aa19.73■□□□□ 0.75
TRAPPC9-213ENST00000522504 SLC34A2O95436 690 aa19.72■□□□□ 0.75
TRAPPC9-213ENST00000522504 USP17L8P0C7I0 530 aa19.72■□□□□ 0.75
TRAPPC9-213ENST00000522504 CTSWP56202 376 aa19.72■□□□□ 0.75
TRAPPC9-213ENST00000522504 MOB2Q70IA6 237 aa19.72■□□□□ 0.75
TRAPPC9-213ENST00000522504 MXD3Q9BW11 206 aa19.72■□□□□ 0.75
TRAPPC9-213ENST00000522504 MYOZ2Q9NPC6 264 aa19.72■□□□□ 0.75
TRAPPC9-213ENST00000522504 USP17L3A6NCW0 530 aa19.71■□□□□ 0.75
TRAPPC9-213ENST00000522504 USP17L4A6NCW7 530 aa19.71■□□□□ 0.75
TRAPPC9-213ENST00000522504 ATP2B4P23634 1241 aa19.71■□□□□ 0.75
TRAPPC9-213ENST00000522504 USP17L1Q7RTZ2 530 aa19.71■□□□□ 0.75
TRAPPC9-213ENST00000522504 RASAL3Q86YV0 1011 aa19.71■□□□□ 0.75
TRAPPC9-213ENST00000522504 TTLL11Q8NHH1 800 aa19.71■□□□□ 0.75
TRAPPC9-213ENST00000522504 GREM2Q9H772 168 aa19.71■□□□□ 0.75
TRAPPC9-213ENST00000522504 PI4KAP2A4QPH2 592 aa19.7■□□□□ 0.74
TRAPPC9-213ENST00000522504 CALD1Q05682 793 aaKnown RBP19.7■□□□□ 0.74
TRAPPC9-213ENST00000522504 CCDC30Q5VVM6 783 aa19.7■□□□□ 0.74
TRAPPC9-213ENST00000522504 PRAMEF18Q5VWM3 479 aa19.7■□□□□ 0.74
TRAPPC9-213ENST00000522504 PODNQ7Z5L7 613 aa19.7■□□□□ 0.74
TRAPPC9-213ENST00000522504 PI4KAP1Q8N8J0 262 aa19.7■□□□□ 0.74
TRAPPC9-213ENST00000522504 MINPP1Q9UNW1 487 aa19.7■□□□□ 0.74
TRAPPC9-213ENST00000522504 DDX58O95786 925 aaKnown RBP19.69■□□□□ 0.74
TRAPPC9-213ENST00000522504 CWF19L2Q2TBE0 894 aaKnown RBP19.69■□□□□ 0.74
TRAPPC9-213ENST00000522504 NBPF9Q3BBW0 867 aa19.69■□□□□ 0.74
TRAPPC9-213ENST00000522504 KSR2Q6VAB6 950 aa19.69■□□□□ 0.74
TRAPPC9-213ENST00000522504 TSR2Q969E8 191 aaKnown RBP19.69■□□□□ 0.74
TRAPPC9-213ENST00000522504 DACT2Q5SW24 774 aa19.68■□□□□ 0.74
TRAPPC9-213ENST00000522504 TXNRD3Q86VQ6 643 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms