RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 MPNDQ8N594 471 aa8.56□□□□□ -1.04
SPIDR-218ENST00000522222 TTLL11Q8NHH1 800 aa8.56□□□□□ -1.04
SPIDR-218ENST00000522222 RTFDC1Q9BY42 306 aaPredicted RBP8.56□□□□□ -1.04
SPIDR-218ENST00000522222 SRCIN1Q9C0H9 1055 aa8.56□□□□□ -1.04
SPIDR-218ENST00000522222 TMX4Q9H1E5 349 aaPredicted RBP8.56□□□□□ -1.04
SPIDR-218ENST00000522222 C1QTNF8P60827 252 aa8.55□□□□□ -1.04
SPIDR-218ENST00000522222 GPSM2P81274 684 aa8.55□□□□□ -1.04
SPIDR-218ENST00000522222 ANKRD18AQ8IVF6 992 aa8.55□□□□□ -1.04
SPIDR-218ENST00000522222 NIM1KQ8IY84 436 aa8.55□□□□□ -1.04
SPIDR-218ENST00000522222 SUPT20HQ8NEM7 779 aa8.55□□□□□ -1.04
SPIDR-218ENST00000522222 IPO9Q96P70 1041 aaKnown RBP8.55□□□□□ -1.04
SPIDR-218ENST00000522222 CDC5LQ99459 802 aaKnown RBP8.55□□□□□ -1.04
SPIDR-218ENST00000522222 KIF16BQ96L93 1317 aa8.54□□□□□ -1.04
SPIDR-218ENST00000522222 A0A1B0GUL6 1792 aa8.54□□□□□ -1.04
SPIDR-218ENST00000522222 FZD9O00144 591 aa8.54□□□□□ -1.04
SPIDR-218ENST00000522222 DDNO94850 711 aaPredicted RBP8.54□□□□□ -1.04
SPIDR-218ENST00000522222 ITGA6P23229 1130 aa8.54□□□□□ -1.04
SPIDR-218ENST00000522222 BRPF1P55201 1214 aaPredicted RBP8.54□□□□□ -1.04
SPIDR-218ENST00000522222 FOXO4P98177 505 aa8.54□□□□□ -1.04
SPIDR-218ENST00000522222 KIAA2012Q0VF49 1180 aa8.54□□□□□ -1.04
SPIDR-218ENST00000522222 EPHA10Q5JZY3 1008 aa8.54□□□□□ -1.04
SPIDR-218ENST00000522222 JDP2Q8WYK2 163 aa8.54□□□□□ -1.04
SPIDR-218ENST00000522222 SUCLG2Q96I99 432 aa8.54□□□□□ -1.04
SPIDR-218ENST00000522222 GPR101Q96P66 508 aaPredicted RBP8.54□□□□□ -1.04
SPIDR-218ENST00000522222 RRAGCQ9HB90 399 aa8.54□□□□□ -1.04
SPIDR-218ENST00000522222 C9orf78Q9NZ63 289 aaPredicted RBP8.54□□□□□ -1.04
SPIDR-218ENST00000522222 NOB1Q9ULX3 412 aaKnown RBP8.54□□□□□ -1.04
SPIDR-218ENST00000522222 UTYO14607 1347 aa8.54□□□□□ -1.04
SPIDR-218ENST00000522222 UFL1O94874 794 aa8.53□□□□□ -1.04
SPIDR-218ENST00000522222 CSF1RP07333 972 aa8.53□□□□□ -1.04
SPIDR-218ENST00000522222 DPY19L2Q6NUT2 758 aa8.53□□□□□ -1.04
SPIDR-218ENST00000522222 DDRGK1Q96HY6 314 aa8.53□□□□□ -1.04
SPIDR-218ENST00000522222 L3MBTL3Q96JM7 780 aaPredicted RBP8.53□□□□□ -1.04
SPIDR-218ENST00000522222 API5Q9BZZ5 524 aaKnown RBP8.53□□□□□ -1.04
SPIDR-218ENST00000522222 POLLQ9UGP5 575 aa8.53□□□□□ -1.04
SPIDR-218ENST00000522222 NSFL1CQ9UNZ2 370 aaKnown RBP8.53□□□□□ -1.04
SPIDR-218ENST00000522222 CHMP3Q9Y3E7 222 aa8.53□□□□□ -1.04
SPIDR-218ENST00000522222 XDHP47989 1333 aa8.53□□□□□ -1.04
SPIDR-218ENST00000522222 POTECB2RU33 542 aa8.52□□□□□ -1.05
SPIDR-218ENST00000522222 C6orf229H3BNL8 230 aa8.52□□□□□ -1.05
SPIDR-218ENST00000522222 NBPF7P0C2Y1 421 aaPredicted RBP8.52□□□□□ -1.05
SPIDR-218ENST00000522222 VEGFAP15692 232 aaPredicted RBP8.52□□□□□ -1.05
SPIDR-218ENST00000522222 IGHMBP2P38935 993 aaKnown RBP8.52□□□□□ -1.05
SPIDR-218ENST00000522222 EIF6P56537 245 aaKnown RBP8.52□□□□□ -1.05
SPIDR-218ENST00000522222 AAMPQ13685 434 aa8.52□□□□□ -1.05
SPIDR-218ENST00000522222 LMBR1LQ6UX01 489 aa8.52□□□□□ -1.05
SPIDR-218ENST00000522222 C16orf71Q8IYS4 520 aaPredicted RBP8.52□□□□□ -1.05
SPIDR-218ENST00000522222 TBC1D16Q8TBP0 767 aa8.52□□□□□ -1.05
SPIDR-218ENST00000522222 KAZALD1Q96I82 304 aa8.52□□□□□ -1.05
SPIDR-218ENST00000522222 VPS33BQ9H267 617 aa8.52□□□□□ -1.05
SPIDR-218ENST00000522222 BICC1Q9H694 974 aaKnown RBP8.52□□□□□ -1.05
SPIDR-218ENST00000522222 BSDC1Q9NW68 430 aaPredicted RBP8.52□□□□□ -1.05
SPIDR-218ENST00000522222 PODXL2Q9NZ53 605 aa8.52□□□□□ -1.05
SPIDR-218ENST00000522222 ANKIB1Q9P2G1 1089 aa8.52□□□□□ -1.05
SPIDR-218ENST00000522222 ZBTB47Q9UFB7 747 aaPredicted RBP8.52□□□□□ -1.05
SPIDR-218ENST00000522222 GGA1Q9UJY5 639 aa8.52□□□□□ -1.05
SPIDR-218ENST00000522222 SCN4AP35499 1836 aa8.52□□□□□ -1.05
SPIDR-218ENST00000522222 ADAMTSL1Q8N6G6 1762 aa8.51□□□□□ -1.05
SPIDR-218ENST00000522222 ANKRD18BA2A2Z9 1011 aa8.51□□□□□ -1.05
SPIDR-218ENST00000522222 YDJCA8MPS7 323 aa8.51□□□□□ -1.05
SPIDR-218ENST00000522222 BCAR3O75815 825 aa8.51□□□□□ -1.05
SPIDR-218ENST00000522222 TOMM70O94826 608 aa8.51□□□□□ -1.05
SPIDR-218ENST00000522222 TRIM27P14373 513 aa8.51□□□□□ -1.05
SPIDR-218ENST00000522222 CCT4P50991 539 aaKnown RBP8.51□□□□□ -1.05
SPIDR-218ENST00000522222 IFIT5Q13325 482 aaKnown RBP8.51□□□□□ -1.05
SPIDR-218ENST00000522222 GPC2Q8N158 579 aa8.51□□□□□ -1.05
SPIDR-218ENST00000522222 ANKRD44Q8N8A2 993 aa8.51□□□□□ -1.05
SPIDR-218ENST00000522222 RBM46Q8TBY0 533 aaKnown RBP8.51□□□□□ -1.05
SPIDR-218ENST00000522222 EYA3Q99504 573 aa8.51□□□□□ -1.05
SPIDR-218ENST00000522222 USP44Q9H0E7 712 aa8.51□□□□□ -1.05
SPIDR-218ENST00000522222 DBNDD1Q9H9R9 158 aa8.51□□□□□ -1.05
SPIDR-218ENST00000522222 ZNRF3Q9ULT6 936 aa8.51□□□□□ -1.05
SPIDR-218ENST00000522222 MINPP1Q9UNW1 487 aa8.51□□□□□ -1.05
SPIDR-218ENST00000522222 TNNQ9UQP3 1299 aa8.51□□□□□ -1.05
SPIDR-218ENST00000522222 GJA3Q9Y6H8 435 aa8.51□□□□□ -1.05
SPIDR-218ENST00000522222 SCN9AQ15858 1988 aa8.51□□□□□ -1.05
SPIDR-218ENST00000522222 MED23Q9ULK4 1368 aa8.5□□□□□ -1.05
SPIDR-218ENST00000522222 IQCA1LA6NCM1 817 aa8.5□□□□□ -1.05
SPIDR-218ENST00000522222 RIMBP2O15034 1052 aa8.5□□□□□ -1.05
SPIDR-218ENST00000522222 ECE2O60344 883 aa8.5□□□□□ -1.05
SPIDR-218ENST00000522222 RAD17O75943 681 aa8.5□□□□□ -1.05
SPIDR-218ENST00000522222 ATP2B4P23634 1241 aa8.5□□□□□ -1.05
SPIDR-218ENST00000522222 SCNN1DP51172 638 aa8.5□□□□□ -1.05
SPIDR-218ENST00000522222 CXCL9Q07325 125 aa8.5□□□□□ -1.05
SPIDR-218ENST00000522222 DOK7Q18PE1 504 aa8.5□□□□□ -1.05
SPIDR-218ENST00000522222 WASHC4Q2M389 1173 aa8.5□□□□□ -1.05
SPIDR-218ENST00000522222 RABL6Q3YEC7 729 aaPredicted RBP8.5□□□□□ -1.05
SPIDR-218ENST00000522222 CENPQQ7L2Z9 268 aaPredicted RBP8.5□□□□□ -1.05
SPIDR-218ENST00000522222 EXOC6Q8TAG9 804 aa8.5□□□□□ -1.05
SPIDR-218ENST00000522222 FRAT1Q92837 279 aaPredicted RBP8.5□□□□□ -1.05
SPIDR-218ENST00000522222 ZNF594Q96JF6 807 aaPredicted RBP8.5□□□□□ -1.05
SPIDR-218ENST00000522222 MPHOSPH8Q99549 860 aa8.5□□□□□ -1.05
SPIDR-218ENST00000522222 TAF1DQ9H5J8 278 aaPredicted RBP8.5□□□□□ -1.05
SPIDR-218ENST00000522222 HACL1Q9UJ83 578 aa8.5□□□□□ -1.05
SPIDR-218ENST00000522222 PSME4Q14997 1843 aa8.5□□□□□ -1.05
SPIDR-218ENST00000522222 WTIPA6NIX2 430 aaPredicted RBP8.49□□□□□ -1.05
SPIDR-218ENST00000522222 UBTFL1P0CB47 393 aaPredicted RBP8.49□□□□□ -1.05
SPIDR-218ENST00000522222 POTEIP0CG38 1075 aa8.49□□□□□ -1.05
SPIDR-218ENST00000522222 POTEJP0CG39 1038 aa8.49□□□□□ -1.05
SPIDR-218ENST00000522222 KLRK1P26718 216 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms