RNA–Protein interactions for RNA: ENST00000522107.1

IGHV3-50-201, Transcript of immunoglobulin heavy variable 3-50 (pseudogene), humanhuman

BASIC

Gene IGHV3-50, Length 317 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-50-201ENST00000522107 TRIM27P14373 513 aa11.92□□□□□ -0.5
IGHV3-50-201ENST00000522107 SCNN1DP51172 638 aa11.92□□□□□ -0.5
IGHV3-50-201ENST00000522107 DOK7Q18PE1 504 aa11.92□□□□□ -0.5
IGHV3-50-201ENST00000522107 RABL6Q3YEC7 729 aaPredicted RBP11.92□□□□□ -0.5
IGHV3-50-201ENST00000522107 GRIPAP1Q4V328 841 aa11.92□□□□□ -0.5
IGHV3-50-201ENST00000522107 PUS3Q9BZE2 481 aaKnown RBP11.92□□□□□ -0.5
IGHV3-50-201ENST00000522107 DBNDD1Q9H9R9 158 aa11.92□□□□□ -0.5
IGHV3-50-201ENST00000522107 ZNF646O15015 1829 aaPredicted RBP11.91□□□□□ -0.5
IGHV3-50-201ENST00000522107 RLBP1P12271 317 aa11.91□□□□□ -0.5
IGHV3-50-201ENST00000522107 RFX5P48382 616 aaPredicted RBP11.91□□□□□ -0.5
IGHV3-50-201ENST00000522107 KLHDC4Q8TBB5 520 aa11.91□□□□□ -0.5
IGHV3-50-201ENST00000522107 MEIS3Q99687 375 aa11.91□□□□□ -0.5
IGHV3-50-201ENST00000522107 TAF1DQ9H5J8 278 aaPredicted RBP11.91□□□□□ -0.5
IGHV3-50-201ENST00000522107 C9orf78Q9NZ63 289 aaPredicted RBP11.91□□□□□ -0.5
IGHV3-50-201ENST00000522107 ADAMTSL1Q8N6G6 1762 aa11.91□□□□□ -0.5
IGHV3-50-201ENST00000522107 PCNTO95613 3336 aa11.9□□□□□ -0.5
IGHV3-50-201ENST00000522107 C6orf229H3BNL8 230 aa11.9□□□□□ -0.5
IGHV3-50-201ENST00000522107 RAD17O75943 681 aa11.9□□□□□ -0.5
IGHV3-50-201ENST00000522107 TOMM70O94826 608 aa11.9□□□□□ -0.5
IGHV3-50-201ENST00000522107 UFL1O94874 794 aa11.9□□□□□ -0.5
IGHV3-50-201ENST00000522107 HSP90B1P14625 803 aaKnown RBP11.9□□□□□ -0.5
IGHV3-50-201ENST00000522107 VEGFAP15692 232 aaPredicted RBP11.9□□□□□ -0.5
IGHV3-50-201ENST00000522107 EPS15P42566 896 aa11.9□□□□□ -0.5
IGHV3-50-201ENST00000522107 WASHC4Q2M389 1173 aa11.9□□□□□ -0.5
IGHV3-50-201ENST00000522107 INTS3Q68E01 1043 aaKnown RBP11.9□□□□□ -0.5
IGHV3-50-201ENST00000522107 NIM1KQ8IY84 436 aa11.9□□□□□ -0.5
IGHV3-50-201ENST00000522107 HELBQ8NG08 1087 aaPredicted RBP11.9□□□□□ -0.5
IGHV3-50-201ENST00000522107 ARHGAP45Q92619 1136 aa11.9□□□□□ -0.5
IGHV3-50-201ENST00000522107 CDC5LQ99459 802 aaKnown RBP11.9□□□□□ -0.5
IGHV3-50-201ENST00000522107 VPS33BQ9H267 617 aa11.9□□□□□ -0.5
IGHV3-50-201ENST00000522107 ZNRF3Q9ULT6 936 aa11.9□□□□□ -0.5
IGHV3-50-201ENST00000522107 XDHP47989 1333 aa11.89□□□□□ -0.51
IGHV3-50-201ENST00000522107 ANKRD18BA2A2Z9 1011 aa11.89□□□□□ -0.51
IGHV3-50-201ENST00000522107 TAF5LO75529 589 aa11.89□□□□□ -0.51
IGHV3-50-201ENST00000522107 CCT4P50991 539 aaKnown RBP11.89□□□□□ -0.51
IGHV3-50-201ENST00000522107 CHRNDQ07001 517 aa11.89□□□□□ -0.51
IGHV3-50-201ENST00000522107 LRRC24Q50LG9 513 aa11.89□□□□□ -0.51
IGHV3-50-201ENST00000522107 DPY19L2Q6NUT2 758 aa11.89□□□□□ -0.51
IGHV3-50-201ENST00000522107 GPC2Q8N158 579 aa11.89□□□□□ -0.51
IGHV3-50-201ENST00000522107 SUPT20HQ8NEM7 779 aa11.89□□□□□ -0.51
IGHV3-50-201ENST00000522107 JDP2Q8WYK2 163 aa11.89□□□□□ -0.51
IGHV3-50-201ENST00000522107 API5Q9BZZ5 524 aaKnown RBP11.89□□□□□ -0.51
IGHV3-50-201ENST00000522107 GGA1Q9UJY5 639 aa11.89□□□□□ -0.51
IGHV3-50-201ENST00000522107 ZBTB12Q9Y330 459 aaPredicted RBP11.89□□□□□ -0.51
IGHV3-50-201ENST00000522107 GJA3Q9Y6H8 435 aa11.89□□□□□ -0.51
IGHV3-50-201ENST00000522107 PSMD14O00487 310 aa11.88□□□□□ -0.51
IGHV3-50-201ENST00000522107 ECE2O60344 883 aa11.88□□□□□ -0.51
IGHV3-50-201ENST00000522107 EGFRP00533 1210 aa11.88□□□□□ -0.51
IGHV3-50-201ENST00000522107 ATP2B4P23634 1241 aa11.88□□□□□ -0.51
IGHV3-50-201ENST00000522107 HTRA3P83110 453 aa11.88□□□□□ -0.51
IGHV3-50-201ENST00000522107 IFIT5Q13325 482 aaKnown RBP11.88□□□□□ -0.51
IGHV3-50-201ENST00000522107 ATF7IPQ6VMQ6 1270 aa11.88□□□□□ -0.51
IGHV3-50-201ENST00000522107 TMEM57Q8N5G2 664 aa11.88□□□□□ -0.51
IGHV3-50-201ENST00000522107 RBM46Q8TBY0 533 aaKnown RBP11.88□□□□□ -0.51
IGHV3-50-201ENST00000522107 CLUAP1Q96AJ1 413 aa11.88□□□□□ -0.51
IGHV3-50-201ENST00000522107 MXD3Q9BW11 206 aa11.88□□□□□ -0.51
IGHV3-50-201ENST00000522107 ANKIB1Q9P2G1 1089 aa11.88□□□□□ -0.51
IGHV3-50-201ENST00000522107 CHMP3Q9Y3E7 222 aa11.88□□□□□ -0.51
IGHV3-50-201ENST00000522107 RIPOR2Q9Y4F9 1068 aa11.88□□□□□ -0.51
IGHV3-50-201ENST00000522107 IGHMBP2P38935 993 aaKnown RBP11.87□□□□□ -0.51
IGHV3-50-201ENST00000522107 GMPSP49915 693 aaPredicted RBP11.87□□□□□ -0.51
IGHV3-50-201ENST00000522107 HIRAP54198 1017 aaPredicted RBP11.87□□□□□ -0.51
IGHV3-50-201ENST00000522107 EIF6P56537 245 aaKnown RBP11.87□□□□□ -0.51
IGHV3-50-201ENST00000522107 FRAT1Q92837 279 aaPredicted RBP11.87□□□□□ -0.51
IGHV3-50-201ENST00000522107 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.87□□□□□ -0.51
IGHV3-50-201ENST00000522107 SCN4AP35499 1836 aa11.87□□□□□ -0.51
IGHV3-50-201ENST00000522107 KIF16BQ96L93 1317 aa11.86□□□□□ -0.51
IGHV3-50-201ENST00000522107 EPHX2P34913 555 aa11.86□□□□□ -0.51
IGHV3-50-201ENST00000522107 PTPN12Q05209 780 aaKnown RBP11.86□□□□□ -0.51
IGHV3-50-201ENST00000522107 FMR1Q06787 632 aaKnown RBP eCLIP11.86□□□□□ -0.51
IGHV3-50-201ENST00000522107 CIAPIN1Q6FI81 312 aa11.86□□□□□ -0.51
IGHV3-50-201ENST00000522107 VGLL2Q8N8G2 317 aa11.86□□□□□ -0.51
IGHV3-50-201ENST00000522107 TRPM4Q8TD43 1214 aa11.86□□□□□ -0.51
IGHV3-50-201ENST00000522107 GMLQ99445 158 aa11.86□□□□□ -0.51
IGHV3-50-201ENST00000522107 TMX4Q9H1E5 349 aaPredicted RBP11.86□□□□□ -0.51
IGHV3-50-201ENST00000522107 LRRFIP2Q9Y608 721 aaKnown RBP11.86□□□□□ -0.51
IGHV3-50-201ENST00000522107 MED23Q9ULK4 1368 aa11.86□□□□□ -0.51
IGHV3-50-201ENST00000522107 ZNF804BA4D1E1 1349 aa11.86□□□□□ -0.51
IGHV3-50-201ENST00000522107 VIL1P09327 827 aaKnown RBP11.85□□□□□ -0.51
IGHV3-50-201ENST00000522107 HSPA6P17066 643 aa11.85□□□□□ -0.51
IGHV3-50-201ENST00000522107 CCDC57Q2TAC2 916 aa11.85□□□□□ -0.51
IGHV3-50-201ENST00000522107 ATG9AQ7Z3C6 839 aa11.85□□□□□ -0.51
IGHV3-50-201ENST00000522107 MPHOSPH8Q99549 860 aa11.85□□□□□ -0.51
IGHV3-50-201ENST00000522107 GPRC5DQ9NZD1 345 aa11.85□□□□□ -0.51
IGHV3-50-201ENST00000522107 HACL1Q9UJ83 578 aa11.85□□□□□ -0.51
IGHV3-50-201ENST00000522107 PSME4Q14997 1843 aa11.85□□□□□ -0.51
IGHV3-50-201ENST00000522107 PLIN1O60240 522 aa11.84□□□□□ -0.51
IGHV3-50-201ENST00000522107 ITGBL1O95965 494 aaPredicted RBP11.84□□□□□ -0.51
IGHV3-50-201ENST00000522107 DLK2Q6UY11 383 aa11.84□□□□□ -0.51
IGHV3-50-201ENST00000522107 LDHAL6AQ6ZMR3 332 aa11.84□□□□□ -0.51
IGHV3-50-201ENST00000522107 PANK1Q8TE04 598 aa11.84□□□□□ -0.51
IGHV3-50-201ENST00000522107 EYA3Q99504 573 aa11.84□□□□□ -0.51
IGHV3-50-201ENST00000522107 ZC3H12CQ9C0D7 883 aaKnown RBP11.84□□□□□ -0.51
IGHV3-50-201ENST00000522107 PA2G4Q9UQ80 394 aaKnown RBP11.84□□□□□ -0.51
IGHV3-50-201ENST00000522107 LEMD3Q9Y2U8 911 aa11.84□□□□□ -0.51
IGHV3-50-201ENST00000522107 ASTN2O75129 1339 aaPredicted RBP11.84□□□□□ -0.51
IGHV3-50-201ENST00000522107 UBTFL1P0CB47 393 aaPredicted RBP11.83□□□□□ -0.52
IGHV3-50-201ENST00000522107 FSTL1Q12841 308 aa11.83□□□□□ -0.52
IGHV3-50-201ENST00000522107 EAPPQ56P03 285 aaPredicted RBP11.83□□□□□ -0.52
IGHV3-50-201ENST00000522107 DACT2Q5SW24 774 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms