RNA–Protein interactions for RNA: ENST00000522013.5

CTNNA1-232, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-232ENST00000522013 LINC00116Q8NCU8 138 aa7.13□□□□□ -1.27
CTNNA1-232ENST00000522013 ANKK1Q8NFD2 765 aa7.13□□□□□ -1.27
CTNNA1-232ENST00000522013 MCOLN1Q9GZU1 580 aa7.13□□□□□ -1.27
CTNNA1-232ENST00000522013 SALL2Q9Y467 1007 aaPredicted RBP7.13□□□□□ -1.27
CTNNA1-232ENST00000522013 SCN4AP35499 1836 aa7.13□□□□□ -1.27
CTNNA1-232ENST00000522013 ATG7O95352 703 aa7.12□□□□□ -1.27
CTNNA1-232ENST00000522013 CHRNA5P30532 468 aa7.12□□□□□ -1.27
CTNNA1-232ENST00000522013 SOX10P56693 466 aa7.12□□□□□ -1.27
CTNNA1-232ENST00000522013 TMF1P82094 1093 aa7.12□□□□□ -1.27
CTNNA1-232ENST00000522013 GRM1Q13255 1194 aa7.12□□□□□ -1.27
CTNNA1-232ENST00000522013 TMCO4Q5TGY1 634 aa7.12□□□□□ -1.27
CTNNA1-232ENST00000522013 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.12□□□□□ -1.27
CTNNA1-232ENST00000522013 PRR14Q9BWN1 585 aa7.12□□□□□ -1.27
CTNNA1-232ENST00000522013 PCDHB3Q9Y5E6 796 aa7.12□□□□□ -1.27
CTNNA1-232ENST00000522013 TRPM7Q96QT4 1865 aa7.12□□□□□ -1.27
CTNNA1-232ENST00000522013 AFDNP55196 1824 aaKnown RBP7.12□□□□□ -1.27
CTNNA1-232ENST00000522013 KDM6AO15550 1401 aaPredicted RBP7.11□□□□□ -1.27
CTNNA1-232ENST00000522013 WDR33Q9C0J8 1336 aaKnown RBP7.11□□□□□ -1.27
CTNNA1-232ENST00000522013 CENPJQ9HC77 1338 aaPredicted RBP7.11□□□□□ -1.27
CTNNA1-232ENST00000522013 LTBP1Q14766 1721 aa7.11□□□□□ -1.27
CTNNA1-232ENST00000522013 POTECB2RU33 542 aa7.11□□□□□ -1.27
CTNNA1-232ENST00000522013 FMNL1O95466 1100 aaPredicted RBP7.11□□□□□ -1.27
CTNNA1-232ENST00000522013 BRD1O95696 1058 aa7.11□□□□□ -1.27
CTNNA1-232ENST00000522013 PPP4CP60510 307 aa7.11□□□□□ -1.27
CTNNA1-232ENST00000522013 PTPRNQ16849 979 aa7.11□□□□□ -1.27
CTNNA1-232ENST00000522013 DEFB115Q30KQ5 88 aa7.11□□□□□ -1.27
CTNNA1-232ENST00000522013 PNMA1Q8ND90 353 aa7.11□□□□□ -1.27
CTNNA1-232ENST00000522013 RGS22Q8NE09 1264 aa7.11□□□□□ -1.27
CTNNA1-232ENST00000522013 FAM174AQ8TBP5 190 aa7.11□□□□□ -1.27
CTNNA1-232ENST00000522013 SMARCC1Q92922 1105 aaPredicted RBP7.11□□□□□ -1.27
CTNNA1-232ENST00000522013 OCSTAMPQ9BR26 566 aa7.11□□□□□ -1.27
CTNNA1-232ENST00000522013 PRDM9Q9NQV7 894 aa7.11□□□□□ -1.27
CTNNA1-232ENST00000522013 ABT1Q9ULW3 272 aaKnown RBP7.11□□□□□ -1.27
CTNNA1-232ENST00000522013 THSD7BQ9C0I4 1608 aa7.11□□□□□ -1.27
CTNNA1-232ENST00000522013 KTN1Q86UP2 1357 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-232ENST00000522013 PASKQ96RG2 1323 aa7.1□□□□□ -1.27
CTNNA1-232ENST00000522013 MYH14Q7Z406 1995 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-232ENST00000522013 PDE4CQ08493 712 aa7.1□□□□□ -1.27
CTNNA1-232ENST00000522013 DGKZQ13574 1117 aa7.1□□□□□ -1.27
CTNNA1-232ENST00000522013 NLGN1Q8N2Q7 840 aa7.1□□□□□ -1.27
CTNNA1-232ENST00000522013 FAM160A2Q8N612 972 aaPredicted RBP7.1□□□□□ -1.27
CTNNA1-232ENST00000522013 TSR3Q9UJK0 312 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-232ENST00000522013 ZMIZ1Q9ULJ6 1067 aa7.1□□□□□ -1.27
CTNNA1-232ENST00000522013 FER1L6Q2WGJ9 1857 aa7.1□□□□□ -1.27
CTNNA1-232ENST00000522013 COL5A3P25940 1745 aaPredicted RBP7.1□□□□□ -1.27
CTNNA1-232ENST00000522013 LOC102724428A0A0B4J2F2 783 aa7.09□□□□□ -1.27
CTNNA1-232ENST00000522013 NR1I2O75469 434 aa7.09□□□□□ -1.27
CTNNA1-232ENST00000522013 MFAP1P55081 439 aaKnown RBP7.09□□□□□ -1.27
CTNNA1-232ENST00000522013 SIK1P57059 783 aa7.09□□□□□ -1.27
CTNNA1-232ENST00000522013 KCNA1Q09470 495 aa7.09□□□□□ -1.27
CTNNA1-232ENST00000522013 TRAPPC3LQ5T215 181 aa7.09□□□□□ -1.27
CTNNA1-232ENST00000522013 NME9Q86XW9 330 aa7.09□□□□□ -1.27
CTNNA1-232ENST00000522013 RTCBQ9Y3I0 505 aaKnown RBP7.09□□□□□ -1.27
CTNNA1-232ENST00000522013 PCDH11XQ9BZA7 1347 aa7.08□□□□□ -1.28
CTNNA1-232ENST00000522013 PCDH11YQ9BZA8 1340 aa7.08□□□□□ -1.28
CTNNA1-232ENST00000522013 USP17L3A6NCW0 530 aa7.08□□□□□ -1.28
CTNNA1-232ENST00000522013 USP17L4A6NCW7 530 aa7.08□□□□□ -1.28
CTNNA1-232ENST00000522013 RASSF10A6NK89 507 aa7.08□□□□□ -1.28
CTNNA1-232ENST00000522013 DXOO77932 396 aaKnown RBP7.08□□□□□ -1.28
CTNNA1-232ENST00000522013 CTHP32929 405 aa7.08□□□□□ -1.28
CTNNA1-232ENST00000522013 RFC4P35249 363 aa7.08□□□□□ -1.28
CTNNA1-232ENST00000522013 EAPPQ56P03 285 aaPredicted RBP7.08□□□□□ -1.28
CTNNA1-232ENST00000522013 USP17L2Q6R6M4 530 aa7.08□□□□□ -1.28
CTNNA1-232ENST00000522013 USP17L1Q7RTZ2 530 aa7.08□□□□□ -1.28
CTNNA1-232ENST00000522013 LDHDQ86WU2 507 aa7.08□□□□□ -1.28
CTNNA1-232ENST00000522013 USHBP1Q8N6Y0 703 aa7.08□□□□□ -1.28
CTNNA1-232ENST00000522013 STK32AQ8WU08 396 aa7.08□□□□□ -1.28
CTNNA1-232ENST00000522013 RAPGEF4Q8WZA2 1011 aa7.08□□□□□ -1.28
CTNNA1-232ENST00000522013 WNT2BQ93097 391 aa7.08□□□□□ -1.28
CTNNA1-232ENST00000522013 GCC1Q96CN9 775 aa7.08□□□□□ -1.28
CTNNA1-232ENST00000522013 MTMR7Q9Y216 660 aa7.08□□□□□ -1.28
CTNNA1-232ENST00000522013 GOLGA8CPA6NN73 597 aa7.07□□□□□ -1.28
CTNNA1-232ENST00000522013 USP17L5A8MUK1 530 aa7.07□□□□□ -1.28
CTNNA1-232ENST00000522013 CCNYL3P0C7X3 344 aa7.07□□□□□ -1.28
CTNNA1-232ENST00000522013 GYS1P13807 737 aa7.07□□□□□ -1.28
CTNNA1-232ENST00000522013 ITPK1Q13572 414 aa7.07□□□□□ -1.28
CTNNA1-232ENST00000522013 ERFEQ4G0M1 354 aa7.07□□□□□ -1.28
CTNNA1-232ENST00000522013 MSS51Q4VC12 460 aa7.07□□□□□ -1.28
CTNNA1-232ENST00000522013 DEPDC4Q8N2C3 294 aa7.07□□□□□ -1.28
CTNNA1-232ENST00000522013 VRTNQ9H8Y1 702 aa7.07□□□□□ -1.28
CTNNA1-232ENST00000522013 EVC2Q86UK5 1308 aa7.06□□□□□ -1.28
CTNNA1-232ENST00000522013 AKAP11Q9UKA4 1901 aa7.06□□□□□ -1.28
CTNNA1-232ENST00000522013 DLL1O00548 723 aa7.06□□□□□ -1.28
CTNNA1-232ENST00000522013 TLL1O43897 1013 aa7.06□□□□□ -1.28
CTNNA1-232ENST00000522013 DDNO94850 711 aaPredicted RBP7.06□□□□□ -1.28
CTNNA1-232ENST00000522013 SKIP12755 728 aa7.06□□□□□ -1.28
CTNNA1-232ENST00000522013 TATP17735 454 aaPredicted RBP7.06□□□□□ -1.28
CTNNA1-232ENST00000522013 COPS2P61201 443 aa7.06□□□□□ -1.28
CTNNA1-232ENST00000522013 NBPF1Q3BBV0 1214 aa7.06□□□□□ -1.28
CTNNA1-232ENST00000522013 TMEM164Q5U3C3 297 aa7.06□□□□□ -1.28
CTNNA1-232ENST00000522013 NFATC2IPQ8NCF5 419 aa7.06□□□□□ -1.28
CTNNA1-232ENST00000522013 PIGBQ92521 554 aa7.06□□□□□ -1.28
CTNNA1-232ENST00000522013 IP6K1Q92551 441 aa7.06□□□□□ -1.28
CTNNA1-232ENST00000522013 CAPNS2Q96L46 248 aa7.06□□□□□ -1.28
CTNNA1-232ENST00000522013 NUDT12Q9BQG2 462 aa7.06□□□□□ -1.28
CTNNA1-232ENST00000522013 EVA1BQ9NVM1 165 aa7.06□□□□□ -1.28
CTNNA1-232ENST00000522013 IVNS1ABPQ9Y6Y0 642 aa7.06□□□□□ -1.28
CTNNA1-232ENST00000522013 USP31Q70CQ4 1352 aa7.06□□□□□ -1.28
CTNNA1-232ENST00000522013 ADAMTSL1Q8N6G6 1762 aa7.05□□□□□ -1.28
CTNNA1-232ENST00000522013 IQCA1LA6NCM1 817 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms