RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 VPS33BQ9H267 617 aa13.07□□□□□ -0.32
TRIM35-204ENST00000521283 FKBP4Q02790 459 aaKnown RBP eCLIP13.06□□□□□ -0.32
TRIM35-204ENST00000521283 DDX46Q7L014 1031 aaKnown RBP13.06□□□□□ -0.32
TRIM35-204ENST00000521283 TSR2Q969E8 191 aaKnown RBP13.06□□□□□ -0.32
TRIM35-204ENST00000521283 PSMD1Q99460 953 aa13.06□□□□□ -0.32
TRIM35-204ENST00000521283 ABCC12Q96J65 1359 aa13.06□□□□□ -0.32
TRIM35-204ENST00000521283 TNRC6CQ9HCJ0 1690 aaKnown RBP13.05□□□□□ -0.32
TRIM35-204ENST00000521283 GLTPD2A6NH11 291 aa13.05□□□□□ -0.32
TRIM35-204ENST00000521283 KSR2Q6VAB6 950 aa13.05□□□□□ -0.32
TRIM35-204ENST00000521283 ZBTB38Q8NAP3 1195 aaPredicted RBP13.05□□□□□ -0.32
TRIM35-204ENST00000521283 METTL22Q9BUU2 404 aaPredicted RBP13.05□□□□□ -0.32
TRIM35-204ENST00000521283 PHAXQ9H814 394 aaKnown RBP13.05□□□□□ -0.32
TRIM35-204ENST00000521283 FANCIQ9NVI1 1328 aa13.05□□□□□ -0.32
TRIM35-204ENST00000521283 TOMM70O94826 608 aa13.04□□□□□ -0.32
TRIM35-204ENST00000521283 RASSF7Q02833 373 aa13.04□□□□□ -0.32
TRIM35-204ENST00000521283 MMRN1Q13201 1228 aa13.04□□□□□ -0.32
TRIM35-204ENST00000521283 C16orf71Q8IYS4 520 aaPredicted RBP13.04□□□□□ -0.32
TRIM35-204ENST00000521283 TSPYL6Q8N831 410 aa13.04□□□□□ -0.32
TRIM35-204ENST00000521283 SUPT20HQ8NEM7 779 aa13.04□□□□□ -0.32
TRIM35-204ENST00000521283 ZNF526Q8TF50 670 aaPredicted RBP13.04□□□□□ -0.32
TRIM35-204ENST00000521283 ZNF428Q96B54 188 aa13.04□□□□□ -0.32
TRIM35-204ENST00000521283 TIAM2Q8IVF5 1701 aa13.03□□□□□ -0.32
TRIM35-204ENST00000521283 PPEF1O14829 653 aaPredicted RBP13.03□□□□□ -0.32
TRIM35-204ENST00000521283 VAMP4O75379 141 aa13.03□□□□□ -0.32
TRIM35-204ENST00000521283 SLC34A2O95436 690 aa13.03□□□□□ -0.32
TRIM35-204ENST00000521283 SF3B3Q15393 1217 aaKnown RBP13.03□□□□□ -0.32
TRIM35-204ENST00000521283 CWC25Q9NXE8 425 aaPredicted RBP13.03□□□□□ -0.32
TRIM35-204ENST00000521283 SALL2Q9Y467 1007 aaPredicted RBP13.03□□□□□ -0.32
TRIM35-204ENST00000521283 E9PSI1 815 aa13.02□□□□□ -0.33
TRIM35-204ENST00000521283 PCCAP05165 728 aaPredicted RBP13.02□□□□□ -0.33
TRIM35-204ENST00000521283 VEGFAP15692 232 aaPredicted RBP13.02□□□□□ -0.33
TRIM35-204ENST00000521283 GRAPQ13588 217 aa13.02□□□□□ -0.33
TRIM35-204ENST00000521283 SP8Q8IXZ3 490 aa13.02□□□□□ -0.33
TRIM35-204ENST00000521283 GRAPLQ8TC17 118 aaPredicted RBP13.02□□□□□ -0.33
TRIM35-204ENST00000521283 JDP2Q8WYK2 163 aa13.02□□□□□ -0.33
TRIM35-204ENST00000521283 ATP6V0A2Q9Y487 856 aa13.02□□□□□ -0.33
TRIM35-204ENST00000521283 LAMB2P55268 1798 aa13.02□□□□□ -0.33
TRIM35-204ENST00000521283 PI4KAP2A4QPH2 592 aa13.01□□□□□ -0.33
TRIM35-204ENST00000521283 ATP5J2-PTCD1G3V325 749 aa13.01□□□□□ -0.33
TRIM35-204ENST00000521283 IRS4O14654 1257 aaPredicted RBP13.01□□□□□ -0.33
TRIM35-204ENST00000521283 EXOSC9Q06265 439 aaKnown RBP13.01□□□□□ -0.33
TRIM35-204ENST00000521283 SYNE4Q8N205 404 aa13.01□□□□□ -0.33
TRIM35-204ENST00000521283 PI4KAP1Q8N8J0 262 aa13.01□□□□□ -0.33
TRIM35-204ENST00000521283 RBM46Q8TBY0 533 aaKnown RBP13.01□□□□□ -0.33
TRIM35-204ENST00000521283 FAM89AQ96GI7 184 aa13.01□□□□□ -0.33
TRIM35-204ENST00000521283 MYD88Q99836 296 aa13.01□□□□□ -0.33
TRIM35-204ENST00000521283 MAP3K2Q9Y2U5 619 aa13.01□□□□□ -0.33
TRIM35-204ENST00000521283 ZNF521Q96K83 1311 aa13.01□□□□□ -0.33
TRIM35-204ENST00000521283 DDX60Q8IY21 1712 aaKnown RBP13□□□□□ -0.33
TRIM35-204ENST00000521283 ABCC4O15439 1325 aa13□□□□□ -0.33
TRIM35-204ENST00000521283 CDHR2Q9BYE9 1310 aa13□□□□□ -0.33
TRIM35-204ENST00000521283 PDE8AO60658 829 aa13□□□□□ -0.33
TRIM35-204ENST00000521283 HCLS1P14317 486 aaPredicted RBP13□□□□□ -0.33
TRIM35-204ENST00000521283 IARSP41252 1262 aaKnown RBP13□□□□□ -0.33
TRIM35-204ENST00000521283 FSTL1Q12841 308 aa13□□□□□ -0.33
TRIM35-204ENST00000521283 FLIIQ13045 1269 aa13□□□□□ -0.33
TRIM35-204ENST00000521283 WDR90Q96KV7 1748 aa12.99□□□□□ -0.33
TRIM35-204ENST00000521283 IQCA1LA6NCM1 817 aa12.99□□□□□ -0.33
TRIM35-204ENST00000521283 FKBP5Q13451 457 aaPredicted RBP12.99□□□□□ -0.33
TRIM35-204ENST00000521283 CCDC152Q4G0S7 254 aa12.99□□□□□ -0.33
TRIM35-204ENST00000521283 ZNF687Q8N1G0 1237 aa12.99□□□□□ -0.33
TRIM35-204ENST00000521283 RTFDC1Q9BY42 306 aaPredicted RBP12.99□□□□□ -0.33
TRIM35-204ENST00000521283 GPHNQ9NQX3 736 aaPredicted RBP12.99□□□□□ -0.33
TRIM35-204ENST00000521283 PCDHGA4Q9Y5G9 962 aa12.99□□□□□ -0.33
TRIM35-204ENST00000521283 SCN4AP35499 1836 aa12.98□□□□□ -0.33
TRIM35-204ENST00000521283 CT47B1P0C2W7 299 aaPredicted RBP12.98□□□□□ -0.33
TRIM35-204ENST00000521283 PRELPP51888 382 aa12.98□□□□□ -0.33
TRIM35-204ENST00000521283 MPNDQ8N594 471 aa12.98□□□□□ -0.33
TRIM35-204ENST00000521283 LINS1Q8NG48 757 aa12.98□□□□□ -0.33
TRIM35-204ENST00000521283 DNAAF4Q8WXU2 420 aa12.98□□□□□ -0.33
TRIM35-204ENST00000521283 RRAGCQ9HB90 399 aa12.98□□□□□ -0.33
TRIM35-204ENST00000521283 NMRK2Q9NPI5 230 aa12.98□□□□□ -0.33
TRIM35-204ENST00000521283 MYH3P11055 1940 aa12.98□□□□□ -0.33
TRIM35-204ENST00000521283 SNED1Q8TER0 1413 aa12.97□□□□□ -0.33
TRIM35-204ENST00000521283 FZD9O00144 591 aa12.97□□□□□ -0.33
TRIM35-204ENST00000521283 NUDT7P0C024 238 aa12.97□□□□□ -0.33
TRIM35-204ENST00000521283 EIF6P56537 245 aaKnown RBP12.97□□□□□ -0.33
TRIM35-204ENST00000521283 FOXK1P85037 733 aa12.97□□□□□ -0.33
TRIM35-204ENST00000521283 DPP8Q6V1X1 898 aaPredicted RBP12.97□□□□□ -0.33
TRIM35-204ENST00000521283 SMC1BQ8NDV3 1235 aa12.97□□□□□ -0.33
TRIM35-204ENST00000521283 ZNF277Q9NRM2 450 aaPredicted RBP12.97□□□□□ -0.33
TRIM35-204ENST00000521283 NEURL1BA8MQ27 555 aa12.96□□□□□ -0.33
TRIM35-204ENST00000521283 GTPBP6O43824 516 aaPredicted RBP12.96□□□□□ -0.33
TRIM35-204ENST00000521283 HSPA6P17066 643 aa12.96□□□□□ -0.33
TRIM35-204ENST00000521283 RPS8P62241 208 aaKnown RBP12.96□□□□□ -0.33
TRIM35-204ENST00000521283 DIEXFQ68CQ4 756 aaKnown RBP12.96□□□□□ -0.33
TRIM35-204ENST00000521283 GPC2Q8N158 579 aa12.96□□□□□ -0.33
TRIM35-204ENST00000521283 LARGE2Q8N3Y3 721 aa12.96□□□□□ -0.33
TRIM35-204ENST00000521283 H7C1W4 665 aa12.95□□□□□ -0.34
TRIM35-204ENST00000521283 IGKV5-2P06315 115 aa12.95□□□□□ -0.34
TRIM35-204ENST00000521283 SLFN5Q08AF3 891 aa12.95□□□□□ -0.34
TRIM35-204ENST00000521283 NIM1KQ8IY84 436 aa12.95□□□□□ -0.34
TRIM35-204ENST00000521283 CDC5LQ99459 802 aaKnown RBP12.95□□□□□ -0.34
TRIM35-204ENST00000521283 EYA3Q99504 573 aa12.95□□□□□ -0.34
TRIM35-204ENST00000521283 PLA2G12BQ9BX93 195 aa12.95□□□□□ -0.34
TRIM35-204ENST00000521283 RYDENQ9NUL5 291 aaKnown RBP12.95□□□□□ -0.34
TRIM35-204ENST00000521283 LRRC37AA6NMS7 1700 aa12.95□□□□□ -0.34
TRIM35-204ENST00000521283 RTL9Q8NET4 1388 aa12.94□□□□□ -0.34
TRIM35-204ENST00000521283 SENP3-EIF4A1A0A087X0R7 540 aa12.94□□□□□ -0.34
TRIM35-204ENST00000521283 PPIP5K2O43314 1243 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms