RNA–Protein interactions for RNA: ENST00000520952.1

CDH17-204, Transcript of cadherin 17, humanhuman

TSL 4

Gene CDH17, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17-204ENST00000520952 ZIC5Q96T25 663 aa11.84□□□□□ -0.51
CDH17-204ENST00000520952 MYD88Q99836 296 aa11.84□□□□□ -0.51
CDH17-204ENST00000520952 PRKRIP1Q9H875 184 aaPredicted RBP11.84□□□□□ -0.51
CDH17-204ENST00000520952 POLR2AP24928 1970 aaKnown RBP11.84□□□□□ -0.51
CDH17-204ENST00000520952 RTL9Q8NET4 1388 aa11.83□□□□□ -0.52
CDH17-204ENST00000520952 ECE2O60344 883 aa11.83□□□□□ -0.52
CDH17-204ENST00000520952 ZBTB38Q8NAP3 1195 aaPredicted RBP11.83□□□□□ -0.52
CDH17-204ENST00000520952 DPF2Q92785 391 aa11.83□□□□□ -0.52
CDH17-204ENST00000520952 ABHD8Q96I13 439 aa11.83□□□□□ -0.52
CDH17-204ENST00000520952 CDHR2Q9BYE9 1310 aa11.83□□□□□ -0.52
CDH17-204ENST00000520952 WTIPA6NIX2 430 aaPredicted RBP11.82□□□□□ -0.52
CDH17-204ENST00000520952 MAP2K2P36507 400 aa11.82□□□□□ -0.52
CDH17-204ENST00000520952 GOLGA2Q08379 1002 aa11.82□□□□□ -0.52
CDH17-204ENST00000520952 TSPYL6Q8N831 410 aa11.82□□□□□ -0.52
CDH17-204ENST00000520952 BEGAINQ9BUH8 593 aa11.82□□□□□ -0.52
CDH17-204ENST00000520952 IFT57Q9NWB7 429 aa11.82□□□□□ -0.52
CDH17-204ENST00000520952 LRRC37AA6NMS7 1700 aa11.82□□□□□ -0.52
CDH17-204ENST00000520952 ASTN2O75129 1339 aaPredicted RBP11.82□□□□□ -0.52
CDH17-204ENST00000520952 ADM5C9JUS6 153 aa11.81□□□□□ -0.52
CDH17-204ENST00000520952 GNAI1P63096 354 aa11.81□□□□□ -0.52
CDH17-204ENST00000520952 CCDC184Q52MB2 194 aa11.81□□□□□ -0.52
CDH17-204ENST00000520952 EYA3Q99504 573 aa11.81□□□□□ -0.52
CDH17-204ENST00000520952 ZC3H12CQ9C0D7 883 aaKnown RBP11.81□□□□□ -0.52
CDH17-204ENST00000520952 UFL1O94874 794 aa11.8□□□□□ -0.52
CDH17-204ENST00000520952 PCCAP05165 728 aaPredicted RBP11.8□□□□□ -0.52
CDH17-204ENST00000520952 VIL1P09327 827 aaKnown RBP11.8□□□□□ -0.52
CDH17-204ENST00000520952 HUNKP57058 714 aa11.8□□□□□ -0.52
CDH17-204ENST00000520952 CACNB1Q02641 598 aaPredicted RBP11.8□□□□□ -0.52
CDH17-204ENST00000520952 KRT26Q7Z3Y9 468 aa11.8□□□□□ -0.52
CDH17-204ENST00000520952 HHIPL1Q96JK4 782 aa11.8□□□□□ -0.52
CDH17-204ENST00000520952 METTL22Q9BUU2 404 aaPredicted RBP11.8□□□□□ -0.52
CDH17-204ENST00000520952 ANKIB1Q9P2G1 1089 aa11.8□□□□□ -0.52
CDH17-204ENST00000520952 SCN9AQ15858 1988 aa11.79□□□□□ -0.52
CDH17-204ENST00000520952 CASP8AP2Q9UKL3 1982 aa11.79□□□□□ -0.52
CDH17-204ENST00000520952 THSD7BQ9C0I4 1608 aa11.79□□□□□ -0.52
CDH17-204ENST00000520952 PDE8AO60658 829 aa11.79□□□□□ -0.52
CDH17-204ENST00000520952 CCDC191Q8NCU4 936 aa11.79□□□□□ -0.52
CDH17-204ENST00000520952 TSR2Q969E8 191 aaKnown RBP11.79□□□□□ -0.52
CDH17-204ENST00000520952 FOXD4L1Q9NU39 408 aa11.79□□□□□ -0.52
CDH17-204ENST00000520952 CWC25Q9NXE8 425 aaPredicted RBP11.79□□□□□ -0.52
CDH17-204ENST00000520952 PODXL2Q9NZ53 605 aa11.79□□□□□ -0.52
CDH17-204ENST00000520952 GGA1Q9UJY5 639 aa11.79□□□□□ -0.52
CDH17-204ENST00000520952 MAP3K2Q9Y2U5 619 aa11.79□□□□□ -0.52
CDH17-204ENST00000520952 CCDC85CA6NKD9 419 aa11.78□□□□□ -0.52
CDH17-204ENST00000520952 G3V3G9 751 aa11.78□□□□□ -0.52
CDH17-204ENST00000520952 IGKV5-2P06315 115 aa11.78□□□□□ -0.52
CDH17-204ENST00000520952 RPS12P25398 132 aaKnown RBP11.78□□□□□ -0.52
CDH17-204ENST00000520952 KIF4BQ2VIQ3 1234 aa11.78□□□□□ -0.52
CDH17-204ENST00000520952 CCDC152Q4G0S7 254 aa11.78□□□□□ -0.52
CDH17-204ENST00000520952 DCAF8Q5TAQ9 597 aa11.78□□□□□ -0.52
CDH17-204ENST00000520952 DCPSQ96C86 337 aaKnown RBP11.78□□□□□ -0.52
CDH17-204ENST00000520952 SCAF8Q9UPN6 1271 aaKnown RBP11.78□□□□□ -0.52
CDH17-204ENST00000520952 PI4KAP2A4QPH2 592 aa11.77□□□□□ -0.53
CDH17-204ENST00000520952 FAM155AB1AL88 458 aaPredicted RBP11.77□□□□□ -0.53
CDH17-204ENST00000520952 BRPF1P55201 1214 aaPredicted RBP11.77□□□□□ -0.53
CDH17-204ENST00000520952 CALD1Q05682 793 aaKnown RBP11.77□□□□□ -0.53
CDH17-204ENST00000520952 CCDC30Q5VVM6 783 aa11.77□□□□□ -0.53
CDH17-204ENST00000520952 G2E3Q7L622 706 aa11.77□□□□□ -0.53
CDH17-204ENST00000520952 PI4KAP1Q8N8J0 262 aa11.77□□□□□ -0.53
CDH17-204ENST00000520952 GBA2Q9HCG7 927 aaPredicted RBP11.77□□□□□ -0.53
CDH17-204ENST00000520952 SCARF1Q14162 830 aa11.76□□□□□ -0.53
CDH17-204ENST00000520952 CWF19L2Q2TBE0 894 aaKnown RBP11.76□□□□□ -0.53
CDH17-204ENST00000520952 RGMBQ6NW40 437 aa11.76□□□□□ -0.53
CDH17-204ENST00000520952 RSBN1LQ6PCB5 846 aaPredicted RBP11.76□□□□□ -0.53
CDH17-204ENST00000520952 KSR2Q6VAB6 950 aa11.76□□□□□ -0.53
CDH17-204ENST00000520952 ANKRD18AQ8IVF6 992 aa11.76□□□□□ -0.53
CDH17-204ENST00000520952 C2orf69Q8N8R5 385 aa11.76□□□□□ -0.53
CDH17-204ENST00000520952 TTLL11Q8NHH1 800 aa11.76□□□□□ -0.53
CDH17-204ENST00000520952 MXD3Q9BW11 206 aa11.76□□□□□ -0.53
CDH17-204ENST00000520952 GREM2Q9H772 168 aa11.76□□□□□ -0.53
CDH17-204ENST00000520952 GGA3Q9NZ52 723 aa11.76□□□□□ -0.53
CDH17-204ENST00000520952 DDX58O95786 925 aaKnown RBP11.75□□□□□ -0.53
CDH17-204ENST00000520952 HSP90B1P14625 803 aaKnown RBP11.75□□□□□ -0.53
CDH17-204ENST00000520952 ZNF157P51786 506 aaPredicted RBP11.75□□□□□ -0.53
CDH17-204ENST00000520952 CTSWP56202 376 aa11.75□□□□□ -0.53
CDH17-204ENST00000520952 ZNF280AP59817 542 aaPredicted RBP11.75□□□□□ -0.53
CDH17-204ENST00000520952 KIF23Q02241 960 aaPredicted RBP11.75□□□□□ -0.53
CDH17-204ENST00000520952 NOGQ13253 232 aa11.75□□□□□ -0.53
CDH17-204ENST00000520952 FAM161AQ3B820 660 aa11.75□□□□□ -0.53
CDH17-204ENST00000520952 ANGEL2Q5VTE6 544 aaKnown RBP11.75□□□□□ -0.53
CDH17-204ENST00000520952 CDCA5Q96FF9 252 aa11.75□□□□□ -0.53
CDH17-204ENST00000520952 GMLQ99445 158 aa11.75□□□□□ -0.53
CDH17-204ENST00000520952 MCOLN1Q9GZU1 580 aa11.75□□□□□ -0.53
CDH17-204ENST00000520952 MINPP1Q9UNW1 487 aa11.75□□□□□ -0.53
CDH17-204ENST00000520952 CA12O43570 354 aa11.74□□□□□ -0.53
CDH17-204ENST00000520952 ATP2B4P23634 1241 aa11.74□□□□□ -0.53
CDH17-204ENST00000520952 PRAMEF18Q5VWM3 479 aa11.74□□□□□ -0.53
CDH17-204ENST00000520952 MOB2Q70IA6 237 aa11.74□□□□□ -0.53
CDH17-204ENST00000520952 SULF1Q8IWU6 871 aa11.74□□□□□ -0.53
CDH17-204ENST00000520952 AGBL3Q8NEM8 1001 aa11.74□□□□□ -0.53
CDH17-204ENST00000520952 XDHP47989 1333 aa11.74□□□□□ -0.53
CDH17-204ENST00000520952 USP17L3A6NCW0 530 aa11.73□□□□□ -0.53
CDH17-204ENST00000520952 USP17L4A6NCW7 530 aa11.73□□□□□ -0.53
CDH17-204ENST00000520952 NEURL1BA8MQ27 555 aa11.73□□□□□ -0.53
CDH17-204ENST00000520952 H7C1W4 665 aa11.73□□□□□ -0.53
CDH17-204ENST00000520952 SLC4A2P04920 1241 aa11.73□□□□□ -0.53
CDH17-204ENST00000520952 USP17L8P0C7I0 530 aa11.73□□□□□ -0.53
CDH17-204ENST00000520952 DGKZQ13574 1117 aa11.73□□□□□ -0.53
CDH17-204ENST00000520952 USP17L1Q7RTZ2 530 aa11.73□□□□□ -0.53
CDH17-204ENST00000520952 TXNRD3Q86VQ6 643 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms