RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 CCDC146Q8IYE0 955 aa14.94□□□□□ -0.02
MRPS28-206ENST00000520946 HYPKQ9NX55 129 aa14.94□□□□□ -0.02
MRPS28-206ENST00000520946 POLLQ9UGP5 575 aa14.94□□□□□ -0.02
MRPS28-206ENST00000520946 ANKRD36CQ5JPF3 1778 aa14.93□□□□□ -0.02
MRPS28-206ENST00000520946 UFL1O94874 794 aa14.93□□□□□ -0.02
MRPS28-206ENST00000520946 GOLGA2Q08379 1002 aa14.93□□□□□ -0.02
MRPS28-206ENST00000520946 KRT24Q2M2I5 525 aa14.93□□□□□ -0.02
MRPS28-206ENST00000520946 RNF186Q9NXI6 227 aa14.93□□□□□ -0.02
MRPS28-206ENST00000520946 GGA3Q9NZ52 723 aa14.93□□□□□ -0.02
MRPS28-206ENST00000520946 GGA1Q9UJY5 639 aa14.93□□□□□ -0.02
MRPS28-206ENST00000520946 CHL1O00533 1208 aa14.92□□□□□ -0.02
MRPS28-206ENST00000520946 REM2Q8IYK8 340 aaPredicted RBP14.92□□□□□ -0.02
MRPS28-206ENST00000520946 TBC1D16Q8TBP0 767 aa14.92□□□□□ -0.02
MRPS28-206ENST00000520946 KCNQ5Q9NR82 932 aa14.92□□□□□ -0.02
MRPS28-206ENST00000520946 EGFRP00533 1210 aa14.91□□□□□ -0.02
MRPS28-206ENST00000520946 HOXB7P09629 217 aa14.91□□□□□ -0.02
MRPS28-206ENST00000520946 SOX10P56693 466 aa14.91□□□□□ -0.02
MRPS28-206ENST00000520946 ISCA1Q9BUE6 129 aa14.91□□□□□ -0.02
MRPS28-206ENST00000520946 HDAC9Q9UKV0 1011 aa14.91□□□□□ -0.02
MRPS28-206ENST00000520946 LAMB2P55268 1798 aa14.9□□□□□ -0.02
MRPS28-206ENST00000520946 FAM155AB1AL88 458 aaPredicted RBP14.9□□□□□ -0.02
MRPS28-206ENST00000520946 VIL1P09327 827 aaKnown RBP14.9□□□□□ -0.02
MRPS28-206ENST00000520946 SCARF1Q14162 830 aa14.9□□□□□ -0.02
MRPS28-206ENST00000520946 TTLL12Q14166 644 aaPredicted RBP14.9□□□□□ -0.02
MRPS28-206ENST00000520946 CCDC152Q4G0S7 254 aa14.9□□□□□ -0.02
MRPS28-206ENST00000520946 ANGEL2Q5VTE6 544 aaKnown RBP14.9□□□□□ -0.02
MRPS28-206ENST00000520946 RUNDC1Q96C34 613 aa14.9□□□□□ -0.02
MRPS28-206ENST00000520946 CDCA5Q96FF9 252 aa14.9□□□□□ -0.02
MRPS28-206ENST00000520946 TAF1P21675 1872 aa14.89□□□□□ -0.03
MRPS28-206ENST00000520946 SLC10A3P09131 477 aa14.89□□□□□ -0.03
MRPS28-206ENST00000520946 DUSP27Q5VZP5 1158 aa14.89□□□□□ -0.03
MRPS28-206ENST00000520946 CTU1Q7Z7A3 348 aaKnown RBP14.89□□□□□ -0.03
MRPS28-206ENST00000520946 ZBTB38Q8NAP3 1195 aaPredicted RBP14.89□□□□□ -0.03
MRPS28-206ENST00000520946 AGBL3Q8NEM8 1001 aa14.89□□□□□ -0.03
MRPS28-206ENST00000520946 PCDH10Q9P2E7 1040 aa14.89□□□□□ -0.03
MRPS28-206ENST00000520946 USP17L8P0C7I0 530 aa14.88□□□□□ -0.03
MRPS28-206ENST00000520946 FKBP1BP68106 108 aa14.88□□□□□ -0.03
MRPS28-206ENST00000520946 RSBN1LQ6PCB5 846 aaPredicted RBP14.88□□□□□ -0.03
MRPS28-206ENST00000520946 ANKRD18AQ8IVF6 992 aa14.88□□□□□ -0.03
MRPS28-206ENST00000520946 FBXW7Q969H0 707 aa14.88□□□□□ -0.03
MRPS28-206ENST00000520946 CCDC85AQ96PX6 553 aaPredicted RBP14.88□□□□□ -0.03
MRPS28-206ENST00000520946 CSRNP1Q96S65 589 aa14.88□□□□□ -0.03
MRPS28-206ENST00000520946 POLR2AP24928 1970 aaKnown RBP14.87□□□□□ -0.03
MRPS28-206ENST00000520946 RTL9Q8NET4 1388 aa14.87□□□□□ -0.03
MRPS28-206ENST00000520946 NF2P35240 595 aa14.87□□□□□ -0.03
MRPS28-206ENST00000520946 TRIM28Q13263 835 aaKnown RBP14.87□□□□□ -0.03
MRPS28-206ENST00000520946 OGFOD1Q8N543 542 aa14.87□□□□□ -0.03
MRPS28-206ENST00000520946 MYD88Q99836 296 aa14.87□□□□□ -0.03
MRPS28-206ENST00000520946 CHMP4AQ9BY43 222 aa14.87□□□□□ -0.03
MRPS28-206ENST00000520946 SEC31BQ9NQW1 1179 aa14.87□□□□□ -0.03
MRPS28-206ENST00000520946 PODXL2Q9NZ53 605 aa14.87□□□□□ -0.03
MRPS28-206ENST00000520946 USP17L3A6NCW0 530 aa14.86□□□□□ -0.03
MRPS28-206ENST00000520946 USP17L4A6NCW7 530 aa14.86□□□□□ -0.03
MRPS28-206ENST00000520946 PDE8AO60658 829 aa14.86□□□□□ -0.03
MRPS28-206ENST00000520946 DDX58O95786 925 aaKnown RBP14.86□□□□□ -0.03
MRPS28-206ENST00000520946 ATP2B4P23634 1241 aa14.86□□□□□ -0.03
MRPS28-206ENST00000520946 USP17L1Q7RTZ2 530 aa14.86□□□□□ -0.03
MRPS28-206ENST00000520946 MYOZ2Q9NPC6 264 aa14.86□□□□□ -0.03
MRPS28-206ENST00000520946 ASTN2O75129 1339 aaPredicted RBP14.86□□□□□ -0.03
MRPS28-206ENST00000520946 DUOX1Q9NRD9 1551 aa14.85□□□□□ -0.03
MRPS28-206ENST00000520946 ELL2O00472 640 aaPredicted RBP14.85□□□□□ -0.03
MRPS28-206ENST00000520946 CALD1Q05682 793 aaKnown RBP14.85□□□□□ -0.03
MRPS28-206ENST00000520946 PKN2Q16513 984 aaKnown RBP14.85□□□□□ -0.03
MRPS28-206ENST00000520946 CCDC191Q8NCU4 936 aa14.85□□□□□ -0.03
MRPS28-206ENST00000520946 CDC5LQ99459 802 aaKnown RBP14.85□□□□□ -0.03
MRPS28-206ENST00000520946 CWC25Q9NXE8 425 aaPredicted RBP14.85□□□□□ -0.03
MRPS28-206ENST00000520946 TRIM35Q9UPQ4 493 aa14.85□□□□□ -0.03
MRPS28-206ENST00000520946 AKAP11Q9UKA4 1901 aa14.85□□□□□ -0.03
MRPS28-206ENST00000520946 XDHP47989 1333 aa14.85□□□□□ -0.03
MRPS28-206ENST00000520946 ZNF280AP59817 542 aaPredicted RBP14.84□□□□□ -0.03
MRPS28-206ENST00000520946 PODNQ7Z5L7 613 aa14.84□□□□□ -0.03
MRPS28-206ENST00000520946 RASAL3Q86YV0 1011 aa14.84□□□□□ -0.03
MRPS28-206ENST00000520946 JARID2Q92833 1246 aaPredicted RBP14.84□□□□□ -0.03
MRPS28-206ENST00000520946 MYBBP1AQ9BQG0 1328 aaKnown RBP14.84□□□□□ -0.03
MRPS28-206ENST00000520946 LRRC37AA6NMS7 1700 aa14.83□□□□□ -0.03
MRPS28-206ENST00000520946 UBE2Q2LH0YL09 131 aa14.83□□□□□ -0.04
MRPS28-206ENST00000520946 PCCAP05165 728 aaPredicted RBP14.83□□□□□ -0.04
MRPS28-206ENST00000520946 PHAXQ9H814 394 aaKnown RBP14.83□□□□□ -0.04
MRPS28-206ENST00000520946 MBIPQ9NS73 344 aa14.83□□□□□ -0.04
MRPS28-206ENST00000520946 PITPNM2Q9BZ72 1349 aa14.83□□□□□ -0.04
MRPS28-206ENST00000520946 DDX60Q8IY21 1712 aaKnown RBP14.83□□□□□ -0.04
MRPS28-206ENST00000520946 TBC1D8O95759 1140 aa14.82□□□□□ -0.04
MRPS28-206ENST00000520946 GNAI1P63096 354 aa14.82□□□□□ -0.04
MRPS28-206ENST00000520946 HPS5Q9UPZ3 1129 aa14.82□□□□□ -0.04
MRPS28-206ENST00000520946 NEXNQ0ZGT2 675 aa14.81□□□□□ -0.04
MRPS28-206ENST00000520946 SREBF2Q12772 1141 aa14.81□□□□□ -0.04
MRPS28-206ENST00000520946 MKRN3Q13064 507 aaKnown RBP14.81□□□□□ -0.04
MRPS28-206ENST00000520946 CCDC30Q5VVM6 783 aa14.81□□□□□ -0.04
MRPS28-206ENST00000520946 PRAMEF18Q5VWM3 479 aa14.81□□□□□ -0.04
MRPS28-206ENST00000520946 MOB2Q70IA6 237 aa14.81□□□□□ -0.04
MRPS28-206ENST00000520946 ARMC9Q7Z3E5 817 aa14.81□□□□□ -0.04
MRPS28-206ENST00000520946 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.81□□□□□ -0.04
MRPS28-206ENST00000520946 ADAMTS8Q9UP79 889 aa14.81□□□□□ -0.04
MRPS28-206ENST00000520946 SCAF8Q9UPN6 1271 aaKnown RBP14.81□□□□□ -0.04
MRPS28-206ENST00000520946 DDX10Q13206 875 aaKnown RBP14.8□□□□□ -0.04
MRPS28-206ENST00000520946 ZNF296Q8WUU4 475 aaPredicted RBP14.8□□□□□ -0.04
MRPS28-206ENST00000520946 METTL22Q9BUU2 404 aaPredicted RBP14.8□□□□□ -0.04
MRPS28-206ENST00000520946 IGHMBP2P38935 993 aaKnown RBP14.79□□□□□ -0.04
MRPS28-206ENST00000520946 KCNJ4P48050 445 aa14.79□□□□□ -0.04
MRPS28-206ENST00000520946 CTSWP56202 376 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms