RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 RAB11FIP3O75154 756 aa22.04■■□□□ 1.12
SDC2-205ENST00000520233 OS9Q13438 667 aaPredicted RBP22.04■■□□□ 1.12
SDC2-205ENST00000520233 MINPP1Q9UNW1 487 aa22.04■■□□□ 1.12
SDC2-205ENST00000520233 ATP6V0A2Q9Y487 856 aa22.04■■□□□ 1.12
SDC2-205ENST00000520233 GTF3C3Q9Y5Q9 886 aa22.04■■□□□ 1.12
SDC2-205ENST00000520233 DALRD3Q5D0E6 543 aaKnown RBP22.03■■□□□ 1.12
SDC2-205ENST00000520233 ERC1Q8IUD2 1116 aa22.03■■□□□ 1.12
SDC2-205ENST00000520233 SMC5Q8IY18 1101 aa22.03■■□□□ 1.12
SDC2-205ENST00000520233 MROH5Q6ZUA9 1318 aa22.03■■□□□ 1.12
SDC2-205ENST00000520233 C7orf43Q8WVR3 580 aa22.02■■□□□ 1.12
SDC2-205ENST00000520233 SPEF2Q9C093 1822 aa22.01■■□□□ 1.11
SDC2-205ENST00000520233 SASH1O94885 1247 aa22.01■■□□□ 1.11
SDC2-205ENST00000520233 CHRNDQ07001 517 aa22.01■■□□□ 1.11
SDC2-205ENST00000520233 METTL24Q5JXM2 366 aa22.01■■□□□ 1.11
SDC2-205ENST00000520233 B4GALNT3Q6L9W6 998 aa22.01■■□□□ 1.11
SDC2-205ENST00000520233 ANKRD2Q9GZV1 360 aa22.01■■□□□ 1.11
SDC2-205ENST00000520233 TMX4Q9H1E5 349 aaPredicted RBP22.01■■□□□ 1.11
SDC2-205ENST00000520233 KDM2BQ8NHM5 1336 aa22.01■■□□□ 1.11
SDC2-205ENST00000520233 SLX4Q8IY92 1834 aa22.01■■□□□ 1.11
SDC2-205ENST00000520233 CC2D2BQ6DHV5 1058 aa22■■□□□ 1.11
SDC2-205ENST00000520233 CENPQQ7L2Z9 268 aaPredicted RBP22■■□□□ 1.11
SDC2-205ENST00000520233 RHPN1Q8TCX5 695 aa22■■□□□ 1.11
SDC2-205ENST00000520233 KIF1BPQ96EK5 621 aa22■■□□□ 1.11
SDC2-205ENST00000520233 CEP126Q9P2H0 1117 aa22■■□□□ 1.11
SDC2-205ENST00000520233 BRCA1P38398 1863 aaKnown RBP22■■□□□ 1.11
SDC2-205ENST00000520233 TFCP2Q12800 502 aa21.99■■□□□ 1.11
SDC2-205ENST00000520233 VGLL2Q8N8G2 317 aa21.99■■□□□ 1.11
SDC2-205ENST00000520233 LRRC37AA6NMS7 1700 aa21.99■■□□□ 1.11
SDC2-205ENST00000520233 C21orf2O43822 256 aa21.98■■□□□ 1.11
SDC2-205ENST00000520233 PDE8BO95263 885 aa21.98■■□□□ 1.11
SDC2-205ENST00000520233 SLC51AQ86UW1 340 aa21.98■■□□□ 1.11
SDC2-205ENST00000520233 HELBQ8NG08 1087 aaPredicted RBP21.98■■□□□ 1.11
SDC2-205ENST00000520233 LRRCC1Q9C099 1032 aa21.98■■□□□ 1.11
SDC2-205ENST00000520233 PODXL2Q9NZ53 605 aa21.98■■□□□ 1.11
SDC2-205ENST00000520233 XDHP47989 1333 aa21.98■■□□□ 1.11
SDC2-205ENST00000520233 CACNA1SQ13698 1873 aa21.98■■□□□ 1.11
SDC2-205ENST00000520233 APBB1O00213 710 aa21.97■■□□□ 1.11
SDC2-205ENST00000520233 GPSM2P81274 684 aa21.97■■□□□ 1.11
SDC2-205ENST00000520233 GRIPAP1Q4V328 841 aa21.97■■□□□ 1.11
SDC2-205ENST00000520233 SOGA3Q5TF21 947 aa21.97■■□□□ 1.11
SDC2-205ENST00000520233 GPR108Q9NPR9 543 aa21.97■■□□□ 1.11
SDC2-205ENST00000520233 ZNF219Q9P2Y4 722 aaPredicted RBP21.97■■□□□ 1.11
SDC2-205ENST00000520233 WWC3Q9ULE0 1092 aa21.97■■□□□ 1.11
SDC2-205ENST00000520233 BCS1LQ9Y276 419 aa21.97■■□□□ 1.11
SDC2-205ENST00000520233 TAF5LO75529 589 aa21.96■■□□□ 1.11
SDC2-205ENST00000520233 OLFM4Q6UX06 510 aa21.96■■□□□ 1.11
SDC2-205ENST00000520233 ANKIB1Q9P2G1 1089 aa21.96■■□□□ 1.11
SDC2-205ENST00000520233 NSFL1CQ9UNZ2 370 aaKnown RBP21.96■■□□□ 1.11
SDC2-205ENST00000520233 AKAP2Q9Y2D5 859 aa21.96■■□□□ 1.11
SDC2-205ENST00000520233 CCDC93Q567U6 631 aa21.95■■□□□ 1.1
SDC2-205ENST00000520233 ANKRD45Q5TZF3 282 aa21.95■■□□□ 1.1
SDC2-205ENST00000520233 MPNDQ8N594 471 aa21.95■■□□□ 1.1
SDC2-205ENST00000520233 LEMD3Q9Y2U8 911 aa21.95■■□□□ 1.1
SDC2-205ENST00000520233 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.95■■□□□ 1.1
SDC2-205ENST00000520233 ATP2B4P23634 1241 aa21.94■■□□□ 1.1
SDC2-205ENST00000520233 UBE4AQ14139 1066 aa21.94■■□□□ 1.1
SDC2-205ENST00000520233 PUM3Q15397 648 aaKnown RBP21.94■■□□□ 1.1
SDC2-205ENST00000520233 RTKN2Q8IZC4 609 aa21.94■■□□□ 1.1
SDC2-205ENST00000520233 ZBTB47Q9UFB7 747 aaPredicted RBP21.94■■□□□ 1.1
SDC2-205ENST00000520233 SNED1Q8TER0 1413 aa21.94■■□□□ 1.1
SDC2-205ENST00000520233 NUCB1Q02818 461 aa21.93■■□□□ 1.1
SDC2-205ENST00000520233 TNNI3KQ59H18 835 aa21.93■■□□□ 1.1
SDC2-205ENST00000520233 DPP8Q6V1X1 898 aaPredicted RBP21.93■■□□□ 1.1
SDC2-205ENST00000520233 CLASRPQ8N2M8 674 aaKnown RBP21.93■■□□□ 1.1
SDC2-205ENST00000520233 IL1RAPL2Q9NP60 686 aa21.93■■□□□ 1.1
SDC2-205ENST00000520233 GGA1Q9UJY5 639 aa21.93■■□□□ 1.1
SDC2-205ENST00000520233 FPGT-TNNI3KV9GXZ4 949 aa21.93■■□□□ 1.1
SDC2-205ENST00000520233 A0A1B0GUL6 1792 aa21.92■■□□□ 1.1
SDC2-205ENST00000520233 ZNF804BA4D1E1 1349 aa21.92■■□□□ 1.1
SDC2-205ENST00000520233 SMARCA5O60264 1052 aaPredicted RBP21.92■■□□□ 1.1
SDC2-205ENST00000520233 FGFR2P21802 821 aa21.92■■□□□ 1.1
SDC2-205ENST00000520233 ATP2B3Q16720 1220 aa21.92■■□□□ 1.1
SDC2-205ENST00000520233 LPIN2Q92539 896 aa21.92■■□□□ 1.1
SDC2-205ENST00000520233 LTBP1Q14766 1721 aa21.92■■□□□ 1.1
SDC2-205ENST00000520233 ZNF609O15014 1411 aa21.91■■□□□ 1.1
SDC2-205ENST00000520233 KCNJ4P48050 445 aa21.91■■□□□ 1.1
SDC2-205ENST00000520233 CHD1LQ86WJ1 897 aa21.91■■□□□ 1.1
SDC2-205ENST00000520233 TBC1D16Q8TBP0 767 aa21.91■■□□□ 1.1
SDC2-205ENST00000520233 RTFDC1Q9BY42 306 aaPredicted RBP21.91■■□□□ 1.1
SDC2-205ENST00000520233 ARFGEF1Q9Y6D6 1849 aa21.9■■□□□ 1.1
SDC2-205ENST00000520233 A0A1B0GUL7 405 aa21.9■■□□□ 1.1
SDC2-205ENST00000520233 SNAP23O00161 211 aa21.9■■□□□ 1.1
SDC2-205ENST00000520233 UFL1O94874 794 aa21.9■■□□□ 1.1
SDC2-205ENST00000520233 IFIT1P09914 478 aaKnown RBP21.9■■□□□ 1.1
SDC2-205ENST00000520233 SLC5A1P13866 664 aa21.9■■□□□ 1.1
SDC2-205ENST00000520233 SUPT20HQ8NEM7 779 aa21.9■■□□□ 1.1
SDC2-205ENST00000520233 EAF2Q96CJ1 260 aaPredicted RBP21.9■■□□□ 1.1
SDC2-205ENST00000520233 PSMD1Q99460 953 aa21.9■■□□□ 1.1
SDC2-205ENST00000520233 POLLQ9UGP5 575 aa21.9■■□□□ 1.1
SDC2-205ENST00000520233 WTIPA6NIX2 430 aaPredicted RBP21.89■■□□□ 1.09
SDC2-205ENST00000520233 C6orf229H3BNL8 230 aa21.89■■□□□ 1.09
SDC2-205ENST00000520233 TIMM10P62072 90 aa21.89■■□□□ 1.09
SDC2-205ENST00000520233 C15orf52Q6ZUT6 534 aaKnown RBP21.89■■□□□ 1.09
SDC2-205ENST00000520233 AACSQ86V21 672 aa21.89■■□□□ 1.09
SDC2-205ENST00000520233 DUOX1Q9NRD9 1551 aa21.88■■□□□ 1.09
SDC2-205ENST00000520233 NEUROD6Q96NK8 337 aa21.88■■□□□ 1.09
SDC2-205ENST00000520233 IRS2Q9Y4H2 1338 aa21.87■■□□□ 1.09
SDC2-205ENST00000520233 IFIT2P09913 472 aaKnown RBP21.87■■□□□ 1.09
SDC2-205ENST00000520233 YBX3P16989 372 aaKnown RBP eCLIP21.87■■□□□ 1.09
SDC2-205ENST00000520233 FKBP4Q02790 459 aaKnown RBP eCLIP21.87■■□□□ 1.097e-6■□□□□ 9.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms