RNA–Protein interactions for RNA: ENST00000519312.5

CDKL3-203, Transcript of cyclin dependent kinase like 3, humanhuman

TSL 1 (best)

Gene CDKL3, Length 1,198 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-203ENST00000519312 AKAP4Q5JQC9 854 aa10.46□□□□□ -0.73
CDKL3-203ENST00000519312 TRAF7Q6Q0C0 670 aa10.46□□□□□ -0.73
CDKL3-203ENST00000519312 SLC52A2Q9HAB3 445 aa10.46□□□□□ -0.73
CDKL3-203ENST00000519312 RRAGCQ9HB90 399 aa10.46□□□□□ -0.73
CDKL3-203ENST00000519312 NARFQ9UHQ1 456 aa10.46□□□□□ -0.73
CDKL3-203ENST00000519312 COL15A1P39059 1388 aa10.46□□□□□ -0.74
CDKL3-203ENST00000519312 UBR2Q8IWV8 1755 aa10.46□□□□□ -0.74
CDKL3-203ENST00000519312 TNFRSF10AO00220 468 aa10.45□□□□□ -0.74
CDKL3-203ENST00000519312 VEGFAP15692 232 aaPredicted RBP10.45□□□□□ -0.74
CDKL3-203ENST00000519312 SSTR3P32745 418 aaPredicted RBP10.45□□□□□ -0.74
CDKL3-203ENST00000519312 IL13P35225 146 aa10.45□□□□□ -0.74
CDKL3-203ENST00000519312 TNNT2P45379 298 aaPredicted RBP10.45□□□□□ -0.74
CDKL3-203ENST00000519312 NFIXQ14938 502 aa10.45□□□□□ -0.74
CDKL3-203ENST00000519312 USPL1Q5W0Q7 1092 aa10.45□□□□□ -0.74
CDKL3-203ENST00000519312 NUTM1Q86Y26 1132 aa10.45□□□□□ -0.74
CDKL3-203ENST00000519312 DNAJC10Q8IXB1 793 aa10.45□□□□□ -0.74
CDKL3-203ENST00000519312 SCN7AQ01118 1682 aa10.44□□□□□ -0.74
CDKL3-203ENST00000519312 PRELPP51888 382 aa10.44□□□□□ -0.74
CDKL3-203ENST00000519312 RASSF7Q02833 373 aa10.44□□□□□ -0.74
CDKL3-203ENST00000519312 SULT6B1Q6IMI4 303 aa10.44□□□□□ -0.74
CDKL3-203ENST00000519312 USB1Q9BQ65 265 aaKnown RBP10.44□□□□□ -0.74
CDKL3-203ENST00000519312 LTBP3Q9NS15 1303 aa10.43□□□□□ -0.74
CDKL3-203ENST00000519312 NFKBIEO00221 500 aa10.43□□□□□ -0.74
CDKL3-203ENST00000519312 TTLL6Q8N841 843 aa10.43□□□□□ -0.74
CDKL3-203ENST00000519312 PANK3Q9H999 370 aa10.43□□□□□ -0.74
CDKL3-203ENST00000519312 CARMIL3Q8ND23 1372 aa10.42□□□□□ -0.74
CDKL3-203ENST00000519312 RNMTO43148 476 aaKnown RBP10.42□□□□□ -0.74
CDKL3-203ENST00000519312 GDF9O60383 454 aa10.42□□□□□ -0.74
CDKL3-203ENST00000519312 SERPINB2P05120 415 aa10.42□□□□□ -0.74
CDKL3-203ENST00000519312 RPIAP49247 311 aa10.42□□□□□ -0.74
CDKL3-203ENST00000519312 GIGYF2Q6Y7W6 1299 aaKnown RBP10.42□□□□□ -0.74
CDKL3-203ENST00000519312 TNS4Q8IZW8 715 aa10.42□□□□□ -0.74
CDKL3-203ENST00000519312 SYMPKQ92797 1274 aaKnown RBP10.42□□□□□ -0.74
CDKL3-203ENST00000519312 ZBTB1Q9Y2K1 713 aa10.42□□□□□ -0.74
CDKL3-203ENST00000519312 FER1L6Q2WGJ9 1857 aa10.41□□□□□ -0.74
CDKL3-203ENST00000519312 ANKRD31Q8N7Z5 1873 aa10.41□□□□□ -0.74
CDKL3-203ENST00000519312 POTECB2RU33 542 aa10.41□□□□□ -0.74
CDKL3-203ENST00000519312 HSPA1AP0DMV8 641 aaKnown RBP10.41□□□□□ -0.74
CDKL3-203ENST00000519312 HSPA1BP0DMV9 641 aaKnown RBP10.41□□□□□ -0.74
CDKL3-203ENST00000519312 MMP16P51512 607 aa10.41□□□□□ -0.74
CDKL3-203ENST00000519312 PRR20EP86478 221 aa10.41□□□□□ -0.74
CDKL3-203ENST00000519312 PRR20CP86479 221 aa10.41□□□□□ -0.74
CDKL3-203ENST00000519312 PRR20DP86480 221 aa10.41□□□□□ -0.74
CDKL3-203ENST00000519312 PRR20BP86481 221 aa10.41□□□□□ -0.74
CDKL3-203ENST00000519312 PRR20AP86496 221 aa10.41□□□□□ -0.74
CDKL3-203ENST00000519312 MORC1Q86VD1 984 aa10.41□□□□□ -0.74
CDKL3-203ENST00000519312 VIRMAQ69YN4 1812 aaKnown RBP10.41□□□□□ -0.74
CDKL3-203ENST00000519312 COL11A2P13942 1736 aaPredicted RBP10.41□□□□□ -0.74
CDKL3-203ENST00000519312 DICER1Q9UPY3 1922 aaKnown RBP10.41□□□□□ -0.74
CDKL3-203ENST00000519312 ARFGEF2Q9Y6D5 1785 aa10.4□□□□□ -0.74
CDKL3-203ENST00000519312 H0YIN7 160 aa10.4□□□□□ -0.74
CDKL3-203ENST00000519312 EIF5P55010 431 aaKnown RBP10.4□□□□□ -0.74
CDKL3-203ENST00000519312 EIF4G2P78344 907 aaKnown RBP eCLIP10.4□□□□□ -0.74
CDKL3-203ENST00000519312 FOXC1Q12948 553 aa10.4□□□□□ -0.74
CDKL3-203ENST00000519312 LGR6Q9HBX8 967 aa10.4□□□□□ -0.74
CDKL3-203ENST00000519312 A0A087WZG4 1122 aa10.39□□□□□ -0.75
CDKL3-203ENST00000519312 TRIM66O15016 1216 aa10.39□□□□□ -0.75
CDKL3-203ENST00000519312 DXOO77932 396 aaKnown RBP10.39□□□□□ -0.75
CDKL3-203ENST00000519312 C2CD5Q86YS7 1000 aa10.39□□□□□ -0.75
CDKL3-203ENST00000519312 PARP9Q8IXQ6 854 aa10.39□□□□□ -0.75
CDKL3-203ENST00000519312 SPIRE2Q8WWL2 714 aa10.39□□□□□ -0.75
CDKL3-203ENST00000519312 BRIP1Q9BX63 1249 aa10.39□□□□□ -0.75
CDKL3-203ENST00000519312 PKD2L1Q9P0L9 805 aa10.39□□□□□ -0.75
CDKL3-203ENST00000519312 PCDHGC3Q9UN70 934 aa10.39□□□□□ -0.75
CDKL3-203ENST00000519312 CD2BP2O95400 341 aaKnown RBP10.38□□□□□ -0.75
CDKL3-203ENST00000519312 STARD3NLO95772 234 aa10.38□□□□□ -0.75
CDKL3-203ENST00000519312 FDX1P10109 184 aa10.38□□□□□ -0.75
CDKL3-203ENST00000519312 HSPA5P11021 654 aaKnown RBP10.38□□□□□ -0.75
CDKL3-203ENST00000519312 PDE6BP35913 854 aa10.38□□□□□ -0.75
CDKL3-203ENST00000519312 TRIM26Q12899 539 aaPredicted RBP10.38□□□□□ -0.75
CDKL3-203ENST00000519312 SLC39A6Q13433 755 aa10.38□□□□□ -0.75
CDKL3-203ENST00000519312 SIPA1L3O60292 1781 aaPredicted RBP10.38□□□□□ -0.75
CDKL3-203ENST00000519312 COL3A1P02461 1466 aaPredicted RBP10.37□□□□□ -0.75
CDKL3-203ENST00000519312 BCORQ6W2J9 1755 aa10.37□□□□□ -0.75
CDKL3-203ENST00000519312 NDUFV2P19404 249 aa10.37□□□□□ -0.75
CDKL3-203ENST00000519312 MTHFSDQ2M296 383 aaKnown RBP10.37□□□□□ -0.75
CDKL3-203ENST00000519312 CCDC88AQ3V6T2 1871 aa10.37□□□□□ -0.75
CDKL3-203ENST00000519312 PKDCCQ504Y2 493 aa10.37□□□□□ -0.75
CDKL3-203ENST00000519312 POLR3GLQ9BT43 218 aa10.37□□□□□ -0.75
CDKL3-203ENST00000519312 TEX13AQ9BXU3 409 aaPredicted RBP10.37□□□□□ -0.75
CDKL3-203ENST00000519312 KNSTRNQ9Y448 316 aa10.37□□□□□ -0.75
CDKL3-203ENST00000519312 HEG1Q9ULI3 1381 aa10.37□□□□□ -0.75
CDKL3-203ENST00000519312 FAM187AA6NFU0 413 aa10.36□□□□□ -0.75
CDKL3-203ENST00000519312 ZBTB24O43167 697 aaPredicted RBP10.36□□□□□ -0.75
CDKL3-203ENST00000519312 IL6STP40189 918 aaPredicted RBP10.36□□□□□ -0.75
CDKL3-203ENST00000519312 SOGA3Q5TF21 947 aa10.36□□□□□ -0.75
CDKL3-203ENST00000519312 STYK1Q6J9G0 422 aa10.36□□□□□ -0.75
CDKL3-203ENST00000519312 PRR5LQ6MZQ0 368 aa10.36□□□□□ -0.75
CDKL3-203ENST00000519312 BEGAINQ9BUH8 593 aa10.36□□□□□ -0.75
CDKL3-203ENST00000519312 MOXD2PA6NHM9 499 aa10.35□□□□□ -0.75
CDKL3-203ENST00000519312 ERFEQ4G0M1 354 aa10.35□□□□□ -0.75
CDKL3-203ENST00000519312 TBC1D9BQ66K14 1250 aa10.35□□□□□ -0.75
CDKL3-203ENST00000519312 TTC5Q8N0Z6 440 aa10.35□□□□□ -0.75
CDKL3-203ENST00000519312 CCDC24Q8N4L8 307 aa10.35□□□□□ -0.75
CDKL3-203ENST00000519312 TAOK3Q9H2K8 898 aa10.35□□□□□ -0.75
CDKL3-203ENST00000519312 CNTNAP1P78357 1384 aa10.35□□□□□ -0.75
CDKL3-203ENST00000519312 CEMIPQ8WUJ3 1361 aa10.35□□□□□ -0.75
CDKL3-203ENST00000519312 NPC1L1Q9UHC9 1359 aa10.35□□□□□ -0.75
CDKL3-203ENST00000519312 SCN4AP35499 1836 aa10.35□□□□□ -0.75
CDKL3-203ENST00000519312 PASKQ96RG2 1323 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms