RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 SF3B3Q15393 1217 aaKnown RBP11.08□□□□□ -0.64
CTNNA1-215ENST00000519309 NECTIN2Q92692 538 aa11.08□□□□□ -0.64
CTNNA1-215ENST00000519309 EYA3Q99504 573 aa11.08□□□□□ -0.64
CTNNA1-215ENST00000519309 THUMPD2Q9BTF0 503 aaKnown RBP11.08□□□□□ -0.64
CTNNA1-215ENST00000519309 POLLQ9UGP5 575 aa11.08□□□□□ -0.64
CTNNA1-215ENST00000519309 TCIRG1Q13488 830 aa11.07□□□□□ -0.64
CTNNA1-215ENST00000519309 AGBL3Q8NEM8 1001 aa11.07□□□□□ -0.64
CTNNA1-215ENST00000519309 CELF1Q92879 486 aaKnown RBP11.07□□□□□ -0.64
CTNNA1-215ENST00000519309 BABAM1Q9NWV8 329 aa11.07□□□□□ -0.64
CTNNA1-215ENST00000519309 TRMT112Q9UI30 125 aaKnown RBP11.07□□□□□ -0.64
CTNNA1-215ENST00000519309 HDAC9Q9UKV0 1011 aa11.07□□□□□ -0.64
CTNNA1-215ENST00000519309 NSFL1CQ9UNZ2 370 aaKnown RBP11.07□□□□□ -0.64
CTNNA1-215ENST00000519309 ECM29Q5VYK3 1845 aa11.07□□□□□ -0.64
CTNNA1-215ENST00000519309 CEP290O15078 2479 aa11.06□□□□□ -0.64
CTNNA1-215ENST00000519309 GPR25O00155 361 aa11.06□□□□□ -0.64
CTNNA1-215ENST00000519309 ANXA1P04083 346 aa11.06□□□□□ -0.64
CTNNA1-215ENST00000519309 NEFMP07197 916 aa11.06□□□□□ -0.64
CTNNA1-215ENST00000519309 GPSM2P81274 684 aa11.06□□□□□ -0.64
CTNNA1-215ENST00000519309 CNGB1Q14028 1251 aaPredicted RBP11.06□□□□□ -0.64
CTNNA1-215ENST00000519309 HABP4Q5JVS0 413 aaKnown RBP11.06□□□□□ -0.64
CTNNA1-215ENST00000519309 TBC1D16Q8TBP0 767 aa11.06□□□□□ -0.64
CTNNA1-215ENST00000519309 KCNQ5Q9NR82 932 aa11.06□□□□□ -0.64
CTNNA1-215ENST00000519309 PODXL2Q9NZ53 605 aa11.06□□□□□ -0.64
CTNNA1-215ENST00000519309 TSPYL4Q9UJ04 414 aa11.06□□□□□ -0.64
CTNNA1-215ENST00000519309 BRCA2P51587 3418 aa11.06□□□□□ -0.64
CTNNA1-215ENST00000519309 C6orf229H3BNL8 230 aa11.05□□□□□ -0.64
CTNNA1-215ENST00000519309 RIMBP2O15034 1052 aa11.05□□□□□ -0.64
CTNNA1-215ENST00000519309 TM4SF4P48230 202 aa11.05□□□□□ -0.64
CTNNA1-215ENST00000519309 CENPFP49454 3210 aa11.05□□□□□ -0.64
CTNNA1-215ENST00000519309 RBM26Q5T8P6 1007 aaKnown RBP11.05□□□□□ -0.64
CTNNA1-215ENST00000519309 ANGEL2Q5VTE6 544 aaKnown RBP11.05□□□□□ -0.64
CTNNA1-215ENST00000519309 COPS6Q7L5N1 327 aa11.05□□□□□ -0.64
CTNNA1-215ENST00000519309 XAGE3Q8WTP9 111 aa11.05□□□□□ -0.64
CTNNA1-215ENST00000519309 GMLQ99445 158 aa11.05□□□□□ -0.64
CTNNA1-215ENST00000519309 MYH3P11055 1940 aa11.05□□□□□ -0.64
CTNNA1-215ENST00000519309 SPEF2Q9C093 1822 aa11.05□□□□□ -0.64
CTNNA1-215ENST00000519309 TBC1D8O95759 1140 aa11.04□□□□□ -0.64
CTNNA1-215ENST00000519309 SCARF1Q14162 830 aa11.04□□□□□ -0.64
CTNNA1-215ENST00000519309 DOK7Q18PE1 504 aa11.04□□□□□ -0.64
CTNNA1-215ENST00000519309 RSBN1LQ6PCB5 846 aaPredicted RBP11.04□□□□□ -0.64
CTNNA1-215ENST00000519309 ISCA1Q9BUE6 129 aa11.04□□□□□ -0.64
CTNNA1-215ENST00000519309 COL1A1P02452 1464 aaPredicted RBP11.04□□□□□ -0.64
CTNNA1-215ENST00000519309 TRIOBPQ9H2D6 2365 aa11.03□□□□□ -0.64
CTNNA1-215ENST00000519309 EIF2S2P20042 333 aaKnown RBP11.03□□□□□ -0.64
CTNNA1-215ENST00000519309 SREBF2Q12772 1141 aa11.03□□□□□ -0.64
CTNNA1-215ENST00000519309 MYOZ2Q9NPC6 264 aa11.03□□□□□ -0.64
CTNNA1-215ENST00000519309 FKTNO75072 461 aa11.02□□□□□ -0.65
CTNNA1-215ENST00000519309 UFL1O94874 794 aa11.02□□□□□ -0.65
CTNNA1-215ENST00000519309 PLBD2Q8NHP8 589 aa11.02□□□□□ -0.65
CTNNA1-215ENST00000519309 ZC3H12CQ9C0D7 883 aaKnown RBP11.02□□□□□ -0.65
CTNNA1-215ENST00000519309 OTOFQ9HC10 1997 aa11.02□□□□□ -0.65
CTNNA1-215ENST00000519309 MAPK8IP3Q9UPT6 1336 aa11.02□□□□□ -0.65
CTNNA1-215ENST00000519309 USP17L8P0C7I0 530 aa11.01□□□□□ -0.65
CTNNA1-215ENST00000519309 FXR1P51114 621 aaKnown RBP eCLIP11.01□□□□□ -0.652e-6■■■□□ 17.9
CTNNA1-215ENST00000519309 RPS8P62241 208 aaKnown RBP11.01□□□□□ -0.65
CTNNA1-215ENST00000519309 AIMP1Q12904 312 aaKnown RBP11.01□□□□□ -0.65
CTNNA1-215ENST00000519309 TRIM28Q13263 835 aaKnown RBP11.01□□□□□ -0.65
CTNNA1-215ENST00000519309 INTS3Q68E01 1043 aaKnown RBP11.01□□□□□ -0.65
CTNNA1-215ENST00000519309 MOB2Q70IA6 237 aa11.01□□□□□ -0.65
CTNNA1-215ENST00000519309 FAM89AQ96GI7 184 aa11.01□□□□□ -0.65
CTNNA1-215ENST00000519309 GGA1Q9UJY5 639 aa11.01□□□□□ -0.65
CTNNA1-215ENST00000519309 MED23Q9ULK4 1368 aa11.01□□□□□ -0.65
CTNNA1-215ENST00000519309 UBE2Q2LH0YL09 131 aa11□□□□□ -0.65
CTNNA1-215ENST00000519309 ALDH1A1P00352 501 aa11□□□□□ -0.65
CTNNA1-215ENST00000519309 HOXB7P09629 217 aa11□□□□□ -0.65
CTNNA1-215ENST00000519309 PNNQ9H307 717 aaKnown RBP11□□□□□ -0.65
CTNNA1-215ENST00000519309 CHPF2Q9P2E5 772 aa11□□□□□ -0.65
CTNNA1-215ENST00000519309 XDHP47989 1333 aa11□□□□□ -0.65
CTNNA1-215ENST00000519309 A0A1B0GUL6 1792 aa11□□□□□ -0.65
CTNNA1-215ENST00000519309 SSC5DA1L4H1 1573 aa10.99□□□□□ -0.65
CTNNA1-215ENST00000519309 POTEFA5A3E0 1075 aa10.99□□□□□ -0.65
CTNNA1-215ENST00000519309 IRS4O14654 1257 aaPredicted RBP10.99□□□□□ -0.65
CTNNA1-215ENST00000519309 NF2P35240 595 aa10.99□□□□□ -0.65
CTNNA1-215ENST00000519309 OTOP1Q7RTM1 612 aa10.99□□□□□ -0.65
CTNNA1-215ENST00000519309 PODNQ7Z5L7 613 aa10.99□□□□□ -0.65
CTNNA1-215ENST00000519309 R3HDMLQ9H3Y0 253 aa10.99□□□□□ -0.65
CTNNA1-215ENST00000519309 MYO3BQ8WXR4 1341 aa10.99□□□□□ -0.65
CTNNA1-215ENST00000519309 USP17L3A6NCW0 530 aa10.98□□□□□ -0.65
CTNNA1-215ENST00000519309 USP17L4A6NCW7 530 aa10.98□□□□□ -0.65
CTNNA1-215ENST00000519309 MMP14P50281 582 aa10.98□□□□□ -0.65
CTNNA1-215ENST00000519309 LMOD3Q0VAK6 560 aa10.98□□□□□ -0.65
CTNNA1-215ENST00000519309 NBPF9Q3BBW0 867 aa10.98□□□□□ -0.65
CTNNA1-215ENST00000519309 LDLRAD1Q5T700 205 aa10.98□□□□□ -0.65
CTNNA1-215ENST00000519309 ANKRD13DQ6ZTN6 518 aa10.98□□□□□ -0.65
CTNNA1-215ENST00000519309 USP17L1Q7RTZ2 530 aa10.98□□□□□ -0.65
CTNNA1-215ENST00000519309 ARMC5Q96C12 935 aa10.98□□□□□ -0.65
CTNNA1-215ENST00000519309 ANKIB1Q9P2G1 1089 aa10.98□□□□□ -0.65
CTNNA1-215ENST00000519309 G3V3G9 751 aa10.97□□□□□ -0.65
CTNNA1-215ENST00000519309 WNT10BO00744 389 aa10.97□□□□□ -0.65
CTNNA1-215ENST00000519309 HSP90B1P14625 803 aaKnown RBP10.97□□□□□ -0.65
CTNNA1-215ENST00000519309 DCAF8Q5TAQ9 597 aa10.97□□□□□ -0.65
CTNNA1-215ENST00000519309 SPRYD7Q5W111 196 aa10.97□□□□□ -0.65
CTNNA1-215ENST00000519309 ZBTB38Q8NAP3 1195 aaPredicted RBP10.97□□□□□ -0.65
CTNNA1-215ENST00000519309 SEC31BQ9NQW1 1179 aa10.97□□□□□ -0.65
CTNNA1-215ENST00000519309 CUL9Q8IWT3 2517 aa10.97□□□□□ -0.65
CTNNA1-215ENST00000519309 SZT2Q5T011 3432 aa10.97□□□□□ -0.65
CTNNA1-215ENST00000519309 ARAP2Q8WZ64 1704 aa10.96□□□□□ -0.65
CTNNA1-215ENST00000519309 MANSC4A6NHS7 340 aaPredicted RBP10.96□□□□□ -0.65
CTNNA1-215ENST00000519309 ATP5J2-PTCD1G3V325 749 aa10.96□□□□□ -0.65
CTNNA1-215ENST00000519309 CHL1O00533 1208 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms