RNA–Protein interactions for RNA: ENST00000519060.6

MSR1-210, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 5

Gene MSR1, Length 1,009 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-210ENST00000519060 CAMTA2O94983 1202 aa12.54□□□□□ -0.4
MSR1-210ENST00000519060 GIGYF2Q6Y7W6 1299 aaKnown RBP12.54□□□□□ -0.4
MSR1-210ENST00000519060 TNS4Q8IZW8 715 aa12.54□□□□□ -0.4
MSR1-210ENST00000519060 GAS2L2Q8NHY3 880 aa12.54□□□□□ -0.4
MSR1-210ENST00000519060 PHACTR3Q96KR7 559 aa12.54□□□□□ -0.4
MSR1-210ENST00000519060 FMNL2Q96PY5 1086 aa12.54□□□□□ -0.4
MSR1-210ENST00000519060 USP16Q9Y5T5 823 aa12.54□□□□□ -0.4
MSR1-210ENST00000519060 NRXN2Q9P2S2 1712 aa12.54□□□□□ -0.4
MSR1-210ENST00000519060 PCNTO95613 3336 aa12.52□□□□□ -0.4
MSR1-210ENST00000519060 BTBD11A6QL63 1104 aa12.52□□□□□ -0.41
MSR1-210ENST00000519060 DDNO94850 711 aaPredicted RBP12.52□□□□□ -0.41
MSR1-210ENST00000519060 HSPA1AP0DMV8 641 aaKnown RBP12.52□□□□□ -0.41
MSR1-210ENST00000519060 HSPA1BP0DMV9 641 aaKnown RBP12.52□□□□□ -0.41
MSR1-210ENST00000519060 SRGNP10124 158 aa12.52□□□□□ -0.41
MSR1-210ENST00000519060 SSTR3P32745 418 aaPredicted RBP12.52□□□□□ -0.41
MSR1-210ENST00000519060 STYK1Q6J9G0 422 aa12.52□□□□□ -0.41
MSR1-210ENST00000519060 NPM2Q86SE8 214 aaKnown RBP12.52□□□□□ -0.41
MSR1-210ENST00000519060 RDH13Q8NBN7 331 aa12.52□□□□□ -0.41
MSR1-210ENST00000519060 CNKSR1Q969H4 720 aa12.52□□□□□ -0.41
MSR1-210ENST00000519060 CD46P15529 392 aa12.51□□□□□ -0.41
MSR1-210ENST00000519060 PIP4K2AP48426 406 aaPredicted RBP12.51□□□□□ -0.41
MSR1-210ENST00000519060 DZIP3Q86Y13 1208 aaKnown RBP12.51□□□□□ -0.41
MSR1-210ENST00000519060 CNBD1Q8NA66 436 aa12.51□□□□□ -0.41
MSR1-210ENST00000519060 C7orf43Q8WVR3 580 aa12.51□□□□□ -0.41
MSR1-210ENST00000519060 MASTLQ96GX5 879 aa12.51□□□□□ -0.41
MSR1-210ENST00000519060 TAOK3Q9H2K8 898 aa12.51□□□□□ -0.41
MSR1-210ENST00000519060 PLSCR2Q9NRY7 297 aa12.51□□□□□ -0.41
MSR1-210ENST00000519060 LTBP3Q9NS15 1303 aa12.51□□□□□ -0.41
MSR1-210ENST00000519060 TNRC6CQ9HCJ0 1690 aaKnown RBP12.51□□□□□ -0.41
MSR1-210ENST00000519060 CCDC88AQ3V6T2 1871 aa12.51□□□□□ -0.41
MSR1-210ENST00000519060 PRAMEF22A3QJZ6 481 aa12.5□□□□□ -0.41
MSR1-210ENST00000519060 NPHP1O15259 732 aa12.5□□□□□ -0.41
MSR1-210ENST00000519060 PRPF40BQ6NWY9 871 aaKnown RBP12.5□□□□□ -0.41
MSR1-210ENST00000519060 NYAP1Q6ZVC0 841 aa12.5□□□□□ -0.41
MSR1-210ENST00000519060 CEMIPQ8WUJ3 1361 aa12.49□□□□□ -0.41
MSR1-210ENST00000519060 PRKAR2BP31323 418 aa12.49□□□□□ -0.41
MSR1-210ENST00000519060 ST5P78524 1137 aa12.49□□□□□ -0.41
MSR1-210ENST00000519060 CLEC4GQ6UXB4 293 aa12.49□□□□□ -0.41
MSR1-210ENST00000519060 NPC1L1Q9UHC9 1359 aa12.48□□□□□ -0.41
MSR1-210ENST00000519060 KLRG2A4D1S0 409 aaPredicted RBP12.48□□□□□ -0.41
MSR1-210ENST00000519060 NBPF5PQ86XG9 351 aaPredicted RBP12.48□□□□□ -0.41
MSR1-210ENST00000519060 RSPH6AQ9H0K4 717 aa12.48□□□□□ -0.41
MSR1-210ENST00000519060 MKRN1Q9UHC7 482 aaKnown RBP12.48□□□□□ -0.41
MSR1-210ENST00000519060 CFHP08603 1231 aa12.47□□□□□ -0.41
MSR1-210ENST00000519060 SNRPA1P09661 255 aaKnown RBP12.47□□□□□ -0.41
MSR1-210ENST00000519060 NEUROD2Q15784 382 aa12.47□□□□□ -0.41
MSR1-210ENST00000519060 KMT5BQ4FZB7 885 aa12.47□□□□□ -0.41
MSR1-210ENST00000519060 SOGA3Q5TF21 947 aa12.47□□□□□ -0.41
MSR1-210ENST00000519060 MCM10Q7L590 875 aa12.47□□□□□ -0.41
MSR1-210ENST00000519060 PRR14Q9BWN1 585 aa12.47□□□□□ -0.41
MSR1-210ENST00000519060 UBR2Q8IWV8 1755 aa12.47□□□□□ -0.41
MSR1-210ENST00000519060 COL3A1P02461 1466 aaPredicted RBP12.46□□□□□ -0.41
MSR1-210ENST00000519060 ANKRD31Q8N7Z5 1873 aa12.46□□□□□ -0.41
MSR1-210ENST00000519060 VIRMAQ69YN4 1812 aaKnown RBP12.46□□□□□ -0.41
MSR1-210ENST00000519060 SLX4Q8IY92 1834 aa12.46□□□□□ -0.41
MSR1-210ENST00000519060 DLEC1Q9Y238 1755 aa12.46□□□□□ -0.41
MSR1-210ENST00000519060 MS4A1P11836 297 aa12.46□□□□□ -0.41
MSR1-210ENST00000519060 NPR1P16066 1061 aa12.46□□□□□ -0.41
MSR1-210ENST00000519060 GCGRP47871 477 aa12.46□□□□□ -0.41
MSR1-210ENST00000519060 NBPF10Q6P3W6 841 aaKnown RBP12.46□□□□□ -0.41
MSR1-210ENST00000519060 OLFM4Q6UX06 510 aa12.46□□□□□ -0.41
MSR1-210ENST00000519060 TPTE2Q6XPS3 522 aa12.46□□□□□ -0.41
MSR1-210ENST00000519060 NBPF15Q8N660 670 aa12.46□□□□□ -0.41
MSR1-210ENST00000519060 KDM4CQ9H3R0 1056 aa12.46□□□□□ -0.41
MSR1-210ENST00000519060 TAF1DQ9H5J8 278 aaPredicted RBP12.46□□□□□ -0.41
MSR1-210ENST00000519060 FAM177BA6PVY3 158 aa12.45□□□□□ -0.42
MSR1-210ENST00000519060 ITGBL1O95965 494 aaPredicted RBP12.45□□□□□ -0.42
MSR1-210ENST00000519060 BRPF1P55201 1214 aaPredicted RBP12.45□□□□□ -0.42
MSR1-210ENST00000519060 DCTN1Q14203 1278 aa12.45□□□□□ -0.42
MSR1-210ENST00000519060 CCDC93Q567U6 631 aa12.45□□□□□ -0.42
MSR1-210ENST00000519060 RTF1Q92541 710 aaKnown RBP12.45□□□□□ -0.42
MSR1-210ENST00000519060 CFAP53Q96M91 514 aa12.45□□□□□ -0.42
MSR1-210ENST00000519060 ZNF277Q9NRM2 450 aaPredicted RBP12.45□□□□□ -0.42
MSR1-210ENST00000519060 NIP7Q9Y221 180 aaKnown RBP eCLIP12.45□□□□□ -0.42
MSR1-210ENST00000519060 FER1L6Q2WGJ9 1857 aa12.44□□□□□ -0.42
MSR1-210ENST00000519060 PASKQ96RG2 1323 aa12.44□□□□□ -0.42
MSR1-210ENST00000519060 IQCA1LA6NCM1 817 aa12.44□□□□□ -0.42
MSR1-210ENST00000519060 U2AF1L5P0DN76 240 aaPredicted RBP12.44□□□□□ -0.42
MSR1-210ENST00000519060 U2AF1Q01081 240 aaKnown RBP eCLIP12.44□□□□□ -0.42
MSR1-210ENST00000519060 FKBP4Q02790 459 aaKnown RBP eCLIP12.44□□□□□ -0.42
MSR1-210ENST00000519060 HLFQ16534 295 aa12.44□□□□□ -0.42
MSR1-210ENST00000519060 LDHDQ86WU2 507 aa12.44□□□□□ -0.42
MSR1-210ENST00000519060 MIS18AQ9NYP9 233 aa12.44□□□□□ -0.42
MSR1-210ENST00000519060 NUDCQ9Y266 331 aa12.44□□□□□ -0.42
MSR1-210ENST00000519060 ZNF652Q9Y2D9 606 aa12.44□□□□□ -0.42
MSR1-210ENST00000519060 ACTN4O43707 911 aaKnown RBP12.43□□□□□ -0.42
MSR1-210ENST00000519060 TAF7Q15545 349 aaPredicted RBP12.43□□□□□ -0.42
MSR1-210ENST00000519060 RTKN2Q8IZC4 609 aa12.43□□□□□ -0.42
MSR1-210ENST00000519060 SYNE4Q8N205 404 aa12.43□□□□□ -0.42
MSR1-210ENST00000519060 FOXN1O15353 648 aa12.42□□□□□ -0.42
MSR1-210ENST00000519060 HTATSF1O43719 755 aaKnown RBP12.42□□□□□ -0.42
MSR1-210ENST00000519060 ALDH1B1P30837 517 aa12.42□□□□□ -0.42
MSR1-210ENST00000519060 VEGFBP49765 207 aa12.42□□□□□ -0.42
MSR1-210ENST00000519060 EAPPQ56P03 285 aaPredicted RBP12.42□□□□□ -0.42
MSR1-210ENST00000519060 BEGAINQ9BUH8 593 aa12.42□□□□□ -0.42
MSR1-210ENST00000519060 HACL1Q9UJ83 578 aa12.42□□□□□ -0.42
MSR1-210ENST00000519060 DICER1Q9UPY3 1922 aaKnown RBP12.42□□□□□ -0.42
MSR1-210ENST00000519060 ZNF541Q9H0D2 1346 aa12.41□□□□□ -0.42
MSR1-210ENST00000519060 TMEM88BA6NKF7 163 aa12.41□□□□□ -0.42
MSR1-210ENST00000519060 FZD9O00144 591 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms