RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 TRDNQ13061 729 aa15.71■□□□□ 0.11
PABPC1-208ENST00000519004 GOLPH3LQ9H4A5 285 aa15.71■□□□□ 0.11
PABPC1-208ENST00000519004 SPG7Q9UQ90 795 aa15.71■□□□□ 0.11
PABPC1-208ENST00000519004 PNMA6EA0A0J9YXQ4 647 aa15.7■□□□□ 0.1
PABPC1-208ENST00000519004 ERLIN2O94905 339 aa15.7■□□□□ 0.1
PABPC1-208ENST00000519004 SGSM3Q96HU1 749 aa15.7■□□□□ 0.1
PABPC1-208ENST00000519004 WDR24Q96S15 920 aa15.7■□□□□ 0.1
PABPC1-208ENST00000519004 CHD2O14647 1828 aaKnown RBP15.7■□□□□ 0.1
PABPC1-208ENST00000519004 EIF3JO75822 258 aaKnown RBP15.7■□□□□ 0.1
PABPC1-208ENST00000519004 GNAI2P04899 355 aa15.7■□□□□ 0.1
PABPC1-208ENST00000519004 USP5P45974 858 aa15.69■□□□□ 0.1
PABPC1-208ENST00000519004 RESTQ13127 1097 aa15.69■□□□□ 0.1
PABPC1-208ENST00000519004 FAM71BQ8TC56 605 aa15.69■□□□□ 0.1
PABPC1-208ENST00000519004 KCNB2Q92953 911 aa15.69■□□□□ 0.1
PABPC1-208ENST00000519004 RAI14Q9P0K7 980 aa15.69■□□□□ 0.1
PABPC1-208ENST00000519004 PPP1R12AO14974 1030 aaPredicted RBP15.69■□□□□ 0.1
PABPC1-208ENST00000519004 C21orf2O43822 256 aa15.69■□□□□ 0.1
PABPC1-208ENST00000519004 DCTN1Q14203 1278 aa15.69■□□□□ 0.1
PABPC1-208ENST00000519004 LRCH2Q5VUJ6 765 aa15.69■□□□□ 0.1
PABPC1-208ENST00000519004 ERC1Q8IUD2 1116 aa15.69■□□□□ 0.1
PABPC1-208ENST00000519004 PI4K2BQ8TCG2 481 aa15.69■□□□□ 0.1
PABPC1-208ENST00000519004 DDX54Q8TDD1 881 aaKnown RBP15.69■□□□□ 0.1
PABPC1-208ENST00000519004 KIFC2Q96AC6 838 aa15.69■□□□□ 0.1
PABPC1-208ENST00000519004 ANKZF1Q9H8Y5 726 aa15.69■□□□□ 0.1
PABPC1-208ENST00000519004 L1RE1Q9UN81 338 aa15.69■□□□□ 0.1
PABPC1-208ENST00000519004 SCP2P22307 547 aa15.68■□□□□ 0.1
PABPC1-208ENST00000519004 NBPF20Q3BBV1 942 aa15.68■□□□□ 0.1
PABPC1-208ENST00000519004 MAP9Q49MG5 647 aa15.68■□□□□ 0.1
PABPC1-208ENST00000519004 CCAR1Q8IX12 1150 aaKnown RBP15.68■□□□□ 0.1
PABPC1-208ENST00000519004 FAM177A1Q8N128 213 aaPredicted RBP15.68■□□□□ 0.1
PABPC1-208ENST00000519004 RNF217Q8TC41 542 aa15.68■□□□□ 0.1
PABPC1-208ENST00000519004 FAM107BQ9H098 131 aa15.68■□□□□ 0.1
PABPC1-208ENST00000519004 NAT10Q9H0A0 1025 aaKnown RBP15.68■□□□□ 0.1
PABPC1-208ENST00000519004 SUGCTQ9HAC7 445 aa15.68■□□□□ 0.1
PABPC1-208ENST00000519004 ARHGEF28Q8N1W1 1705 aaKnown RBP15.68■□□□□ 0.1
PABPC1-208ENST00000519004 CAMSAP1Q5T5Y3 1602 aa15.68■□□□□ 0.1
PABPC1-208ENST00000519004 ZCCHC11Q5TAX3 1644 aaKnown RBP15.68■□□□□ 0.1
PABPC1-208ENST00000519004 EXOC5O00471 708 aa15.68■□□□□ 0.1
PABPC1-208ENST00000519004 LIG3P49916 1009 aa15.68■□□□□ 0.1
PABPC1-208ENST00000519004 PTH1RQ03431 593 aa15.68■□□□□ 0.1
PABPC1-208ENST00000519004 PPP2R5AQ15172 486 aa15.68■□□□□ 0.1
PABPC1-208ENST00000519004 FBXW10Q5XX13 1052 aa15.68■□□□□ 0.1
PABPC1-208ENST00000519004 PRPF40BQ6NWY9 871 aaKnown RBP15.68■□□□□ 0.1
PABPC1-208ENST00000519004 FBXW7Q969H0 707 aa15.68■□□□□ 0.1
PABPC1-208ENST00000519004 RAB21Q9UL25 225 aa15.68■□□□□ 0.1
PABPC1-208ENST00000519004 GOLIM4O00461 696 aa15.67■□□□□ 0.1
PABPC1-208ENST00000519004 FCHSD1Q86WN1 690 aa15.67■□□□□ 0.1
PABPC1-208ENST00000519004 NUTM1Q86Y26 1132 aa15.67■□□□□ 0.1
PABPC1-208ENST00000519004 ERCC4Q92889 916 aaPredicted RBP15.67■□□□□ 0.1
PABPC1-208ENST00000519004 DHX58Q96C10 678 aa15.67■□□□□ 0.1
PABPC1-208ENST00000519004 UTP14AQ9BVJ6 771 aaKnown RBP15.67■□□□□ 0.1
PABPC1-208ENST00000519004 ADGRB3O60242 1522 aa15.67■□□□□ 0.1
PABPC1-208ENST00000519004 USP8P40818 1118 aa15.67■□□□□ 0.1
PABPC1-208ENST00000519004 GNG11P61952 73 aa15.67■□□□□ 0.1
PABPC1-208ENST00000519004 ENGASEQ8NFI3 743 aa15.67■□□□□ 0.1
PABPC1-208ENST00000519004 CLIC6Q96NY7 704 aa15.67■□□□□ 0.1
PABPC1-208ENST00000519004 FAM204AQ9H8W3 233 aa15.67■□□□□ 0.1
PABPC1-208ENST00000519004 STK26Q9P289 416 aa15.67■□□□□ 0.1
PABPC1-208ENST00000519004 F6X3S4 739 aa15.66■□□□□ 0.1
PABPC1-208ENST00000519004 ZSCAN12O43309 604 aa15.66■□□□□ 0.1
PABPC1-208ENST00000519004 ATP8B2P98198 1209 aa15.66■□□□□ 0.1
PABPC1-208ENST00000519004 COL9A3Q14050 684 aaPredicted RBP15.66■□□□□ 0.1
PABPC1-208ENST00000519004 WWC2Q6AWC2 1192 aa15.66■□□□□ 0.1
PABPC1-208ENST00000519004 SLC4A10Q6U841 1118 aa15.66■□□□□ 0.1
PABPC1-208ENST00000519004 PNKPQ96T60 521 aa15.66■□□□□ 0.1
PABPC1-208ENST00000519004 ABCB6Q9NP58 842 aa15.66■□□□□ 0.1
PABPC1-208ENST00000519004 IL1RAPL2Q9NP60 686 aa15.66■□□□□ 0.1
PABPC1-208ENST00000519004 PPP2R2CQ9Y2T4 447 aa15.66■□□□□ 0.1
PABPC1-208ENST00000519004 ABCC3O15438 1527 aa15.66■□□□□ 0.1
PABPC1-208ENST00000519004 CCT4P50991 539 aaKnown RBP15.66■□□□□ 0.1
PABPC1-208ENST00000519004 A1CFQ9NQ94 594 aaKnown RBP15.66■□□□□ 0.1
PABPC1-208ENST00000519004 PHACTR2O75167 634 aa15.65■□□□□ 0.1
PABPC1-208ENST00000519004 FBLN1P23142 703 aa15.65■□□□□ 0.1
PABPC1-208ENST00000519004 HAP1P54257 671 aaPredicted RBP15.65■□□□□ 0.1
PABPC1-208ENST00000519004 ISM2Q6H9L7 571 aa15.65■□□□□ 0.1
PABPC1-208ENST00000519004 TMED8Q6PL24 325 aaPredicted RBP15.65■□□□□ 0.1
PABPC1-208ENST00000519004 MSANTD4Q8NCY6 345 aa15.65■□□□□ 0.1
PABPC1-208ENST00000519004 STAG1Q8WVM7 1258 aa15.65■□□□□ 0.1
PABPC1-208ENST00000519004 BPIFA3Q9BQP9 254 aa15.65■□□□□ 0.1
PABPC1-208ENST00000519004 CRYBG1Q9Y4K1 1723 aa15.65■□□□□ 0.1
PABPC1-208ENST00000519004 IRF6O14896 467 aa15.65■□□□□ 0.1
PABPC1-208ENST00000519004 KINO60870 393 aaKnown RBP15.65■□□□□ 0.1
PABPC1-208ENST00000519004 MAP2K1Q02750 393 aaPredicted RBP15.65■□□□□ 0.1
PABPC1-208ENST00000519004 CPLX2Q6PUV4 134 aaKnown RBP15.65■□□□□ 0.1
PABPC1-208ENST00000519004 CCDC102AQ96A19 550 aa15.65■□□□□ 0.1
PABPC1-208ENST00000519004 RAB11FIP3O75154 756 aa15.64■□□□□ 0.09
PABPC1-208ENST00000519004 CASP8Q14790 479 aa15.64■□□□□ 0.09
PABPC1-208ENST00000519004 DPCR1Q3MIW9 517 aa15.64■□□□□ 0.09
PABPC1-208ENST00000519004 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.64■□□□□ 0.09
PABPC1-208ENST00000519004 TMEM139Q8IV31 216 aa15.64■□□□□ 0.09
PABPC1-208ENST00000519004 TACO1Q9BSH4 297 aaKnown RBP15.64■□□□□ 0.09
PABPC1-208ENST00000519004 GNL3LQ9NVN8 582 aaKnown RBP15.64■□□□□ 0.09
PABPC1-208ENST00000519004 PPLO60437 1756 aa15.64■□□□□ 0.09
PABPC1-208ENST00000519004 ADD1P35611 737 aaKnown RBP15.64■□□□□ 0.09
PABPC1-208ENST00000519004 CHMP4BP1P59074 171 aa15.64■□□□□ 0.09
PABPC1-208ENST00000519004 C11orf91Q3C1V1 193 aa15.64■□□□□ 0.09
PABPC1-208ENST00000519004 HSP90B2PQ58FF3 399 aa15.64■□□□□ 0.09
PABPC1-208ENST00000519004 CCDC73Q6ZRK6 1079 aa15.64■□□□□ 0.09
PABPC1-208ENST00000519004 G2E3Q7L622 706 aa15.64■□□□□ 0.09
PABPC1-208ENST00000519004 CNTROBQ8N137 903 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms