RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	CDCA7L	Q96GN5	454 aa		30.61	■■■□□ 2.49
CNOT7-204	ENST00000518885	GRM8	O00222	908 aa		30.6	■■■□□ 2.49
CNOT7-204	ENST00000518885	TRMT2A	Q8IZ69	625 aa	Known RBP	30.6	■■■□□ 2.49
CNOT7-204	ENST00000518885	RIMBP2	O15034	1052 aa		30.59	■■■□□ 2.49
CNOT7-204	ENST00000518885	CSF1R	P07333	972 aa		30.59	■■■□□ 2.49
CNOT7-204	ENST00000518885	ITGA6	P23229	1130 aa		30.59	■■■□□ 2.49
CNOT7-204	ENST00000518885	ATP2B4	P23634	1241 aa		30.59	■■■□□ 2.49
CNOT7-204	ENST00000518885	MIER1	Q8N108	512 aa		30.59	■■■□□ 2.49
CNOT7-204	ENST00000518885	MPHOSPH8	Q99549	860 aa		30.59	■■■□□ 2.49
CNOT7-204	ENST00000518885	SSH1	Q8WYL5	1049 aa		30.58	■■■□□ 2.49
CNOT7-204	ENST00000518885	BCL2L13	Q9BXK5	485 aa		30.58	■■■□□ 2.49
CNOT7-204	ENST00000518885	LTBP1	Q14766	1721 aa		30.57	■■■□□ 2.48
CNOT7-204	ENST00000518885	ANKRD18B	A2A2Z9	1011 aa		30.57	■■■□□ 2.48
CNOT7-204	ENST00000518885	SCNN1D	P51172	638 aa		30.57	■■■□□ 2.48
CNOT7-204	ENST00000518885	USP50	Q70EL3	339 aa	Predicted RBP	30.57	■■■□□ 2.48
CNOT7-204	ENST00000518885	SMC4	Q9NTJ3	1288 aa		30.57	■■■□□ 2.48
CNOT7-204	ENST00000518885	COL4A1	P02462	1669 aa		30.57	■■■□□ 2.48
CNOT7-204	ENST00000518885	RAD17	O75943	681 aa		30.56	■■■□□ 2.48
CNOT7-204	ENST00000518885	GPRC5D	Q9NZD1	345 aa		30.56	■■■□□ 2.48
CNOT7-204	ENST00000518885	ECE2	O60344	883 aa		30.55	■■■□□ 2.48
CNOT7-204	ENST00000518885	IFIT5	Q13325	482 aa	Known RBP	30.55	■■■□□ 2.48
CNOT7-204	ENST00000518885	FAM161A	Q3B820	660 aa		30.55	■■■□□ 2.48
CNOT7-204	ENST00000518885	ANKRD2	Q9GZV1	360 aa		30.55	■■■□□ 2.48
CNOT7-204	ENST00000518885	DBNDD1	Q9H9R9	158 aa		30.55	■■■□□ 2.48
CNOT7-204	ENST00000518885	ADARB2	Q9NS39	739 aa	Known RBP	30.55	■■■□□ 2.48
CNOT7-204	ENST00000518885	CHMP3	Q9Y3E7	222 aa		30.55	■■■□□ 2.48
CNOT7-204	ENST00000518885	POTEI	P0CG38	1075 aa		30.54	■■■□□ 2.48
CNOT7-204	ENST00000518885	POTEJ	P0CG39	1038 aa		30.54	■■■□□ 2.48
CNOT7-204	ENST00000518885	MINPP1	Q9UNW1	487 aa		30.54	■■■□□ 2.48
CNOT7-204	ENST00000518885	GMPS	P49915	693 aa	Predicted RBP	30.53	■■■□□ 2.48
CNOT7-204	ENST00000518885	EPS15	P42566	896 aa		30.52	■■■□□ 2.48
CNOT7-204	ENST00000518885	CCDC57	Q2TAC2	916 aa		30.52	■■■□□ 2.48
CNOT7-204	ENST00000518885	YDJC	A8MPS7	323 aa		30.51	■■■□□ 2.47
CNOT7-204	ENST00000518885	RPS12	P25398	132 aa	Known RBP	30.51	■■■□□ 2.47
CNOT7-204	ENST00000518885	DOK7	Q18PE1	504 aa		30.51	■■■□□ 2.47
CNOT7-204	ENST00000518885	LEMD3	Q9Y2U8	911 aa		30.51	■■■□□ 2.47
CNOT7-204	ENST00000518885		H7C1D1	291 aa		30.5	■■■□□ 2.47
CNOT7-204	ENST00000518885	FOXO4	P98177	505 aa		30.5	■■■□□ 2.47
CNOT7-204	ENST00000518885	TAF7L	Q5H9L4	462 aa		30.5	■■■□□ 2.47
CNOT7-204	ENST00000518885	CCT4	P50991	539 aa	Known RBP	30.49	■■■□□ 2.47
CNOT7-204	ENST00000518885	LMBR1L	Q6UX01	489 aa		30.49	■■■□□ 2.47
CNOT7-204	ENST00000518885	DPF2	Q92785	391 aa		30.49	■■■□□ 2.47
CNOT7-204	ENST00000518885	GPR101	Q96P66	508 aa	Predicted RBP	30.49	■■■□□ 2.47
CNOT7-204	ENST00000518885	MED23	Q9ULK4	1368 aa		30.49	■■■□□ 2.47
CNOT7-204	ENST00000518885	ADAMTSL1	Q8N6G6	1762 aa		30.48	■■■□□ 2.47
CNOT7-204	ENST00000518885	PSMD14	O00487	310 aa		30.47	■■■□□ 2.47
CNOT7-204	ENST00000518885	KCNJ4	P48050	445 aa		30.47	■■■□□ 2.47
CNOT7-204	ENST00000518885	PODN	Q7Z5L7	613 aa		30.47	■■■□□ 2.47
CNOT7-204	ENST00000518885	CNTROB	Q8N137	903 aa		30.47	■■■□□ 2.47
CNOT7-204	ENST00000518885	CREBZF	Q9NS37	354 aa		30.47	■■■□□ 2.47
CNOT7-204	ENST00000518885	UTY	O14607	1347 aa		30.47	■■■□□ 2.47
CNOT7-204	ENST00000518885	SPEF2	Q9C093	1822 aa		30.46	■■■□□ 2.47
CNOT7-204	ENST00000518885	HNRNPU	Q00839	825 aa	Known RBP eCLIP	30.46	■■■□□ 2.47
CNOT7-204	ENST00000518885	CNOT7	Q9UIV1	285 aa	Known RBP	30.46	■■■□□ 2.47
CNOT7-204	ENST00000518885	BRPF1	P55201	1214 aa	Predicted RBP	30.45	■■■□□ 2.47
CNOT7-204	ENST00000518885	DNAJC5G	Q8N7S2	189 aa		30.45	■■■□□ 2.47
CNOT7-204	ENST00000518885	KLRG1	Q96E93	195 aa		30.45	■■■□□ 2.47
CNOT7-204	ENST00000518885	API5	Q9BZZ5	524 aa	Known RBP	30.45	■■■□□ 2.47
CNOT7-204	ENST00000518885	KIF16B	Q96L93	1317 aa		30.45	■■■□□ 2.46
CNOT7-204	ENST00000518885	PASK	Q96RG2	1323 aa		30.45	■■■□□ 2.46
CNOT7-204	ENST00000518885	MAP1S	Q66K74	1059 aa	Predicted RBP	30.44	■■■□□ 2.46
CNOT7-204	ENST00000518885	ZNF804B	A4D1E1	1349 aa		30.44	■■■□□ 2.46
CNOT7-204	ENST00000518885	ITGBL1	O95965	494 aa	Predicted RBP	30.43	■■■□□ 2.46
CNOT7-204	ENST00000518885	MICALL2	Q8IY33	904 aa		30.43	■■■□□ 2.46
CNOT7-204	ENST00000518885	ZC3H15	Q8WU90	426 aa	Known RBP	30.43	■■■□□ 2.46
CNOT7-204	ENST00000518885	VIL1	P09327	827 aa	Known RBP	30.42	■■■□□ 2.46
CNOT7-204	ENST00000518885	NBPF7	P0C2Y1	421 aa	Predicted RBP	30.42	■■■□□ 2.46
CNOT7-204	ENST00000518885	HTRA3	P83110	453 aa		30.42	■■■□□ 2.46
CNOT7-204	ENST00000518885	CHRND	Q07001	517 aa		30.42	■■■□□ 2.46
CNOT7-204	ENST00000518885	LDHAL6A	Q6ZMR3	332 aa		30.42	■■■□□ 2.46
CNOT7-204	ENST00000518885	COA1	Q9GZY4	146 aa		30.42	■■■□□ 2.46
CNOT7-204	ENST00000518885	CNNM1	Q9NRU3	951 aa		30.42	■■■□□ 2.46
CNOT7-204	ENST00000518885	EPHA10	Q5JZY3	1008 aa		30.41	■■■□□ 2.46
CNOT7-204	ENST00000518885	SUCLG2	Q96I99	432 aa		30.41	■■■□□ 2.46
CNOT7-204	ENST00000518885	HDAC5	Q9UQL6	1122 aa		30.41	■■■□□ 2.46
CNOT7-204	ENST00000518885	ZBTB12	Q9Y330	459 aa	Predicted RBP	30.41	■■■□□ 2.46
CNOT7-204	ENST00000518885	TMEM88B	A6NKF7	163 aa		30.4	■■■□□ 2.46
CNOT7-204	ENST00000518885	NOB1	Q9ULX3	412 aa	Known RBP	30.4	■■■□□ 2.46
CNOT7-204	ENST00000518885	USP17L3	A6NCW0	530 aa		30.39	■■■□□ 2.46
CNOT7-204	ENST00000518885	USP17L4	A6NCW7	530 aa		30.39	■■■□□ 2.46
CNOT7-204	ENST00000518885	RARS	P54136	660 aa	Known RBP	30.39	■■■□□ 2.46
CNOT7-204	ENST00000518885	USP17L1	Q7RTZ2	530 aa		30.39	■■■□□ 2.46
CNOT7-204	ENST00000518885	AGBL3	Q8NEM8	1001 aa		30.39	■■■□□ 2.46
CNOT7-204	ENST00000518885	RSBN1L	Q6PCB5	846 aa	Predicted RBP	30.38	■■■□□ 2.45
CNOT7-204	ENST00000518885	ZNF609	O15014	1411 aa		30.38	■■■□□ 2.45
CNOT7-204	ENST00000518885	IPO8	O15397	1037 aa	Known RBP	30.37	■■■□□ 2.45
CNOT7-204	ENST00000518885	ARHGAP45	Q92619	1136 aa		30.37	■■■□□ 2.45
CNOT7-204	ENST00000518885	BICC1	Q9H694	974 aa	Known RBP	30.37	■■■□□ 2.45
CNOT7-204	ENST00000518885	KCNQ5	Q9NR82	932 aa		30.37	■■■□□ 2.45
CNOT7-204	ENST00000518885	RABL6	Q3YEC7	729 aa	Predicted RBP	30.35	■■■□□ 2.45
CNOT7-204	ENST00000518885	USP44	Q9H0E7	712 aa		30.35	■■■□□ 2.45
CNOT7-204	ENST00000518885	PGAP2	Q9UHJ9	254 aa		30.35	■■■□□ 2.45
CNOT7-204	ENST00000518885	MYO3B	Q8WXR4	1341 aa		30.35	■■■□□ 2.45
CNOT7-204	ENST00000518885	MMP14	P50281	582 aa		30.33	■■■□□ 2.45
CNOT7-204	ENST00000518885	STRIP1	Q5VSL9	837 aa		30.33	■■■□□ 2.45
CNOT7-204	ENST00000518885	TRPM4	Q8TD43	1214 aa		30.33	■■■□□ 2.45
CNOT7-204	ENST00000518885	KAZALD1	Q96I82	304 aa		30.33	■■■□□ 2.45
CNOT7-204	ENST00000518885	ZNF594	Q96JF6	807 aa	Predicted RBP	30.33	■■■□□ 2.45
CNOT7-204	ENST00000518885	MROH5	Q6ZUA9	1318 aa		30.32	■■■□□ 2.44
CNOT7-204	ENST00000518885	UBTFL1	P0CB47	393 aa	Predicted RBP	30.32	■■■□□ 2.44

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms