RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 CCDC136Q96JN2 1154 aa11.72□□□□□ -0.53
CLN8-203ENST00000518780 GPR108Q9NPR9 543 aa11.72□□□□□ -0.53
CLN8-203ENST00000518780 PODXL2Q9NZ53 605 aa11.72□□□□□ -0.53
CLN8-203ENST00000518780 CEP126Q9P2H0 1117 aa11.72□□□□□ -0.53
CLN8-203ENST00000518780 MINPP1Q9UNW1 487 aa11.72□□□□□ -0.53
CLN8-203ENST00000518780 AKAP2Q9Y2D5 859 aa11.72□□□□□ -0.53
CLN8-203ENST00000518780 KIF13BQ9NQT8 1826 aa11.72□□□□□ -0.53
CLN8-203ENST00000518780 LRP5O75197 1615 aa11.71□□□□□ -0.53
CLN8-203ENST00000518780 XDHP47989 1333 aa11.71□□□□□ -0.53
CLN8-203ENST00000518780 OS9Q13438 667 aaPredicted RBP11.71□□□□□ -0.53
CLN8-203ENST00000518780 ATG9AQ7Z3C6 839 aa11.71□□□□□ -0.53
CLN8-203ENST00000518780 SMC5Q8IY18 1101 aa11.71□□□□□ -0.53
CLN8-203ENST00000518780 NLGN2Q8NFZ4 835 aa11.71□□□□□ -0.53
CLN8-203ENST00000518780 ZNF594Q96JF6 807 aaPredicted RBP11.71□□□□□ -0.53
CLN8-203ENST00000518780 VPS33BQ9H267 617 aa11.71□□□□□ -0.53
CLN8-203ENST00000518780 ZBTB47Q9UFB7 747 aaPredicted RBP11.71□□□□□ -0.53
CLN8-203ENST00000518780 PA2G4Q9UQ80 394 aaKnown RBP11.71□□□□□ -0.53
CLN8-203ENST00000518780 LEMD3Q9Y2U8 911 aa11.71□□□□□ -0.53
CLN8-203ENST00000518780 PDE8BO95263 885 aa11.7□□□□□ -0.54
CLN8-203ENST00000518780 CHRNDQ07001 517 aa11.7□□□□□ -0.54
CLN8-203ENST00000518780 UBE4AQ14139 1066 aa11.7□□□□□ -0.54
CLN8-203ENST00000518780 LRRC24Q50LG9 513 aa11.7□□□□□ -0.54
CLN8-203ENST00000518780 CCDC93Q567U6 631 aa11.7□□□□□ -0.54
CLN8-203ENST00000518780 METTL24Q5JXM2 366 aa11.7□□□□□ -0.54
CLN8-203ENST00000518780 CENPQQ7L2Z9 268 aaPredicted RBP11.7□□□□□ -0.54
CLN8-203ENST00000518780 SUPT20HQ8NEM7 779 aa11.7□□□□□ -0.54
CLN8-203ENST00000518780 KLHDC4Q8TBB5 520 aa11.7□□□□□ -0.54
CLN8-203ENST00000518780 PUS3Q9BZE2 481 aaKnown RBP11.7□□□□□ -0.54
CLN8-203ENST00000518780 LRRCC1Q9C099 1032 aa11.7□□□□□ -0.54
CLN8-203ENST00000518780 SIL1Q9H173 461 aa11.7□□□□□ -0.54
CLN8-203ENST00000518780 TNRC6CQ9HCJ0 1690 aaKnown RBP11.7□□□□□ -0.54
CLN8-203ENST00000518780 ANKRD31Q8N7Z5 1873 aa11.7□□□□□ -0.54
CLN8-203ENST00000518780 IGHDP01880 384 aa11.69□□□□□ -0.54
CLN8-203ENST00000518780 ATP2B4P23634 1241 aa11.69□□□□□ -0.54
CLN8-203ENST00000518780 CLASRPQ8N2M8 674 aaKnown RBP11.69□□□□□ -0.54
CLN8-203ENST00000518780 MPNDQ8N594 471 aa11.69□□□□□ -0.54
CLN8-203ENST00000518780 VGLL2Q8N8G2 317 aa11.69□□□□□ -0.54
CLN8-203ENST00000518780 RHPN1Q8TCX5 695 aa11.69□□□□□ -0.54
CLN8-203ENST00000518780 ANKIB1Q9P2G1 1089 aa11.69□□□□□ -0.54
CLN8-203ENST00000518780 EXOC6BQ9Y2D4 811 aa11.69□□□□□ -0.54
CLN8-203ENST00000518780 SASH1O94885 1247 aa11.68□□□□□ -0.54
CLN8-203ENST00000518780 PUM3Q15397 648 aaKnown RBP11.68□□□□□ -0.54
CLN8-203ENST00000518780 DPP8Q6V1X1 898 aaPredicted RBP11.68□□□□□ -0.54
CLN8-203ENST00000518780 C15orf52Q6ZUT6 534 aaKnown RBP11.68□□□□□ -0.54
CLN8-203ENST00000518780 LPIN2Q92539 896 aa11.68□□□□□ -0.54
CLN8-203ENST00000518780 PSMD1Q99460 953 aa11.68□□□□□ -0.54
CLN8-203ENST00000518780 EYA3Q99504 573 aa11.68□□□□□ -0.54
CLN8-203ENST00000518780 RTFDC1Q9BY42 306 aaPredicted RBP11.68□□□□□ -0.54
CLN8-203ENST00000518780 GGA1Q9UJY5 639 aa11.68□□□□□ -0.54
CLN8-203ENST00000518780 NSFL1CQ9UNZ2 370 aaKnown RBP11.68□□□□□ -0.54
CLN8-203ENST00000518780 BCS1LQ9Y276 419 aa11.68□□□□□ -0.54
CLN8-203ENST00000518780 MYH3P11055 1940 aa11.68□□□□□ -0.54
CLN8-203ENST00000518780 LTBP3Q9NS15 1303 aa11.67□□□□□ -0.54
CLN8-203ENST00000518780 ZBTB22O15209 634 aa11.67□□□□□ -0.54
CLN8-203ENST00000518780 C21orf2O43822 256 aa11.67□□□□□ -0.54
CLN8-203ENST00000518780 GRIN3BO60391 1043 aa11.67□□□□□ -0.54
CLN8-203ENST00000518780 IFIT1P09914 478 aaKnown RBP11.67□□□□□ -0.54
CLN8-203ENST00000518780 KCNJ4P48050 445 aa11.67□□□□□ -0.54
CLN8-203ENST00000518780 TFCP2Q12800 502 aa11.67□□□□□ -0.54
CLN8-203ENST00000518780 ZNF804BA4D1E1 1349 aa11.66□□□□□ -0.54
CLN8-203ENST00000518780 KDM2BQ8NHM5 1336 aa11.66□□□□□ -0.54
CLN8-203ENST00000518780 SLC5A1P13866 664 aa11.66□□□□□ -0.54
CLN8-203ENST00000518780 FGFR2P21802 821 aa11.66□□□□□ -0.54
CLN8-203ENST00000518780 GPSM2P81274 684 aa11.66□□□□□ -0.54
CLN8-203ENST00000518780 FKBP4Q02790 459 aaKnown RBP eCLIP11.66□□□□□ -0.54
CLN8-203ENST00000518780 NUCB1Q02818 461 aa11.66□□□□□ -0.54
CLN8-203ENST00000518780 ATP2B3Q16720 1220 aa11.66□□□□□ -0.54
CLN8-203ENST00000518780 ANKRD45Q5TZF3 282 aa11.66□□□□□ -0.54
CLN8-203ENST00000518780 TBC1D16Q8TBP0 767 aa11.66□□□□□ -0.54
CLN8-203ENST00000518780 DCAF8L1A6NGE4 600 aa11.65□□□□□ -0.54
CLN8-203ENST00000518780 TNNI3KQ59H18 835 aa11.65□□□□□ -0.54
CLN8-203ENST00000518780 CAVIN4Q5BKX8 364 aa11.65□□□□□ -0.54
CLN8-203ENST00000518780 CHD1LQ86WJ1 897 aa11.65□□□□□ -0.54
CLN8-203ENST00000518780 ZC3H12CQ9C0D7 883 aaKnown RBP11.65□□□□□ -0.54
CLN8-203ENST00000518780 FPGT-TNNI3KV9GXZ4 949 aa11.65□□□□□ -0.54
CLN8-203ENST00000518780 DLEC1Q9Y238 1755 aa11.64□□□□□ -0.55
CLN8-203ENST00000518780 COL11A2P13942 1736 aaPredicted RBP11.64□□□□□ -0.55
CLN8-203ENST00000518780 SNED1Q8TER0 1413 aa11.64□□□□□ -0.55
CLN8-203ENST00000518780 A0A1B0GUL7 405 aa11.64□□□□□ -0.55
CLN8-203ENST00000518780 C6orf229H3BNL8 230 aa11.64□□□□□ -0.55
CLN8-203ENST00000518780 TAF5LO75529 589 aa11.64□□□□□ -0.55
CLN8-203ENST00000518780 UFL1O94874 794 aa11.64□□□□□ -0.55
CLN8-203ENST00000518780 IFIT2P09913 472 aaKnown RBP11.64□□□□□ -0.55
CLN8-203ENST00000518780 WASHC4Q2M389 1173 aa11.64□□□□□ -0.55
CLN8-203ENST00000518780 HELBQ8NG08 1087 aaPredicted RBP11.64□□□□□ -0.55
CLN8-203ENST00000518780 TAOK3Q9H2K8 898 aa11.64□□□□□ -0.55
CLN8-203ENST00000518780 POLLQ9UGP5 575 aa11.64□□□□□ -0.55
CLN8-203ENST00000518780 MED23Q9ULK4 1368 aa11.64□□□□□ -0.55
CLN8-203ENST00000518780 KIAA1551Q9HCM1 1747 aa11.63□□□□□ -0.55
CLN8-203ENST00000518780 KIAA2012Q0VF49 1180 aa11.63□□□□□ -0.55
CLN8-203ENST00000518780 GPR162Q16538 588 aa11.63□□□□□ -0.55
CLN8-203ENST00000518780 B4GALNT3Q6L9W6 998 aa11.63□□□□□ -0.55
CLN8-203ENST00000518780 AACSQ86V21 672 aa11.63□□□□□ -0.55
CLN8-203ENST00000518780 EAF2Q96CJ1 260 aaPredicted RBP11.63□□□□□ -0.55
CLN8-203ENST00000518780 GPATCH3Q96I76 525 aa11.63□□□□□ -0.55
CLN8-203ENST00000518780 ZNF512BQ96KM6 892 aaPredicted RBP11.63□□□□□ -0.55
CLN8-203ENST00000518780 COA1Q9GZY4 146 aa11.63□□□□□ -0.55
CLN8-203ENST00000518780 GNL3LQ9NVN8 582 aaKnown RBP11.63□□□□□ -0.55
CLN8-203ENST00000518780 ZNF219Q9P2Y4 722 aaPredicted RBP11.63□□□□□ -0.55
CLN8-203ENST00000518780 GTF3C3Q9Y5Q9 886 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms