RNA–Protein interactions for RNA: ENST00000518290.1

ARFGEF1-204, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 3,179 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-204ENST00000518290 TNPO1Q92973 898 aaKnown RBP9.67□□□□□ -0.86
ARFGEF1-204ENST00000518290 TMX3Q96JJ7 454 aa9.67□□□□□ -0.86
ARFGEF1-204ENST00000518290 AGXT2Q9BYV1 514 aa9.67□□□□□ -0.86
ARFGEF1-204ENST00000518290 FOCADQ5VW36 1801 aa9.67□□□□□ -0.86
ARFGEF1-204ENST00000518290 PDS5AQ29RF7 1337 aaKnown RBP9.67□□□□□ -0.86
ARFGEF1-204ENST00000518290 LRRC24Q50LG9 513 aa9.67□□□□□ -0.86
ARFGEF1-204ENST00000518290 CERKQ8TCT0 537 aa9.67□□□□□ -0.86
ARFGEF1-204ENST00000518290 CCDC8Q9H0W5 538 aaPredicted RBP9.67□□□□□ -0.86
ARFGEF1-204ENST00000518290 RASEFQ8IZ41 740 aa9.67□□□□□ -0.86
ARFGEF1-204ENST00000518290 ISY1Q9ULR0 285 aaKnown RBP9.67□□□□□ -0.86
ARFGEF1-204ENST00000518290 WDR19Q8NEZ3 1342 aa9.66□□□□□ -0.86
ARFGEF1-204ENST00000518290 ZFYP08048 801 aaPredicted RBP9.66□□□□□ -0.86
ARFGEF1-204ENST00000518290 LINC00116Q8NCU8 138 aa9.66□□□□□ -0.86
ARFGEF1-204ENST00000518290 CCDC88AQ3V6T2 1871 aa9.66□□□□□ -0.86
ARFGEF1-204ENST00000518290 A0A1B0GUL7 405 aa9.66□□□□□ -0.86
ARFGEF1-204ENST00000518290 SLC27A2O14975 620 aa9.66□□□□□ -0.86
ARFGEF1-204ENST00000518290 ADAMTS2O95450 1211 aa9.66□□□□□ -0.86
ARFGEF1-204ENST00000518290 BRD1O95696 1058 aa9.66□□□□□ -0.86
ARFGEF1-204ENST00000518290 SF3B3Q15393 1217 aaKnown RBP9.66□□□□□ -0.86
ARFGEF1-204ENST00000518290 CCDC57Q2TAC2 916 aa9.66□□□□□ -0.86
ARFGEF1-204ENST00000518290 CREB3L3Q68CJ9 461 aa9.66□□□□□ -0.86
ARFGEF1-204ENST00000518290 TMED8Q6PL24 325 aaPredicted RBP9.66□□□□□ -0.86
ARFGEF1-204ENST00000518290 RUFY3Q7L099 469 aa9.66□□□□□ -0.86
ARFGEF1-204ENST00000518290 SIL1Q9H173 461 aa9.66□□□□□ -0.86
ARFGEF1-204ENST00000518290 SLKQ9H2G2 1235 aaPredicted RBP9.66□□□□□ -0.86
ARFGEF1-204ENST00000518290 PAG1Q9NWQ8 432 aa9.66□□□□□ -0.86
ARFGEF1-204ENST00000518290 ZDHHC9Q9Y397 364 aa9.66□□□□□ -0.86
ARFGEF1-204ENST00000518290 ANKRD31Q8N7Z5 1873 aa9.66□□□□□ -0.86
ARFGEF1-204ENST00000518290 UBAP1LF5GYI3 381 aa9.65□□□□□ -0.86
ARFGEF1-204ENST00000518290 ZSCAN31Q96LW9 406 aaPredicted RBP9.65□□□□□ -0.86
ARFGEF1-204ENST00000518290 FAM227BQ96M60 508 aa9.65□□□□□ -0.86
ARFGEF1-204ENST00000518290 SH2B1Q9NRF2 756 aaPredicted RBP9.65□□□□□ -0.86
ARFGEF1-204ENST00000518290 IRS4O14654 1257 aaPredicted RBP9.65□□□□□ -0.86
ARFGEF1-204ENST00000518290 ATP6V1AP38606 617 aa9.65□□□□□ -0.86
ARFGEF1-204ENST00000518290 IFIT5Q13325 482 aaKnown RBP9.65□□□□□ -0.86
ARFGEF1-204ENST00000518290 KRT32Q14532 448 aa9.65□□□□□ -0.86
ARFGEF1-204ENST00000518290 MCMDC2Q4G0Z9 681 aa9.65□□□□□ -0.86
ARFGEF1-204ENST00000518290 CWC27Q6UX04 472 aaKnown RBP9.65□□□□□ -0.86
ARFGEF1-204ENST00000518290 TMEM87AQ8NBN3 555 aa9.65□□□□□ -0.86
ARFGEF1-204ENST00000518290 RBM8AQ9Y5S9 174 aaKnown RBP9.65□□□□□ -0.86
ARFGEF1-204ENST00000518290 U3KPZ7 1027 aaPredicted RBP9.65□□□□□ -0.86
ARFGEF1-204ENST00000518290 ZNF804BA4D1E1 1349 aa9.65□□□□□ -0.86
ARFGEF1-204ENST00000518290 FSD2A1L4K1 749 aa9.65□□□□□ -0.87
ARFGEF1-204ENST00000518290 ANKRD18BA2A2Z9 1011 aa9.65□□□□□ -0.87
ARFGEF1-204ENST00000518290 ITGA6P23229 1130 aa9.65□□□□□ -0.87
ARFGEF1-204ENST00000518290 EVCP57679 992 aa9.65□□□□□ -0.87
ARFGEF1-204ENST00000518290 SUSD4Q5VX71 490 aa9.65□□□□□ -0.87
ARFGEF1-204ENST00000518290 GBP4Q96PP9 640 aa9.65□□□□□ -0.87
ARFGEF1-204ENST00000518290 GREM2Q9H772 168 aa9.65□□□□□ -0.87
ARFGEF1-204ENST00000518290 NID2Q14112 1375 aa9.64□□□□□ -0.87
ARFGEF1-204ENST00000518290 NEK4P51957 841 aa9.64□□□□□ -0.87
ARFGEF1-204ENST00000518290 GSE1Q14687 1217 aa9.64□□□□□ -0.87
ARFGEF1-204ENST00000518290 SKOR2Q2VWA4 1001 aaPredicted RBP9.64□□□□□ -0.87
ARFGEF1-204ENST00000518290 KIAA1211Q6ZU35 1233 aa9.64□□□□□ -0.87
ARFGEF1-204ENST00000518290 ZNF589Q86UQ0 364 aaPredicted RBP9.64□□□□□ -0.87
ARFGEF1-204ENST00000518290 FAM89AQ96GI7 184 aa9.64□□□□□ -0.87
ARFGEF1-204ENST00000518290 UTP14AQ9BVJ6 771 aaKnown RBP9.64□□□□□ -0.87
ARFGEF1-204ENST00000518290 PUS3Q9BZE2 481 aaKnown RBP9.64□□□□□ -0.87
ARFGEF1-204ENST00000518290 IRS2Q9Y4H2 1338 aa9.64□□□□□ -0.87
ARFGEF1-204ENST00000518290 FOXP2O15409 715 aa9.64□□□□□ -0.87
ARFGEF1-204ENST00000518290 RPS6KA4O75676 772 aa9.64□□□□□ -0.87
ARFGEF1-204ENST00000518290 PDE8BO95263 885 aa9.64□□□□□ -0.87
ARFGEF1-204ENST00000518290 MAP4K4O95819 1239 aaPredicted RBP9.64□□□□□ -0.87
ARFGEF1-204ENST00000518290 LRRFIP1Q32MZ4 808 aaKnown RBP9.64□□□□□ -0.87
ARFGEF1-204ENST00000518290 BOLA2Q9H3K6 86 aa9.64□□□□□ -0.87
ARFGEF1-204ENST00000518290 LIMCH1Q9UPQ0 1083 aa9.64□□□□□ -0.87
ARFGEF1-204ENST00000518290 ZNF652Q9Y2D9 606 aa9.64□□□□□ -0.87
ARFGEF1-204ENST00000518290 CDK5RAP2Q96SN8 1893 aa9.64□□□□□ -0.87
ARFGEF1-204ENST00000518290 TAF1P21675 1872 aa9.63□□□□□ -0.87
ARFGEF1-204ENST00000518290 PSMA5P28066 241 aa9.63□□□□□ -0.87
ARFGEF1-204ENST00000518290 XAGE2Q96GT9 111 aa9.63□□□□□ -0.87
ARFGEF1-204ENST00000518290 GJD4Q96KN9 370 aaPredicted RBP9.63□□□□□ -0.87
ARFGEF1-204ENST00000518290 FSD1Q9BTV5 496 aa9.63□□□□□ -0.87
ARFGEF1-204ENST00000518290 BCL2L12Q9HB09 334 aa9.63□□□□□ -0.87
ARFGEF1-204ENST00000518290 CEP126Q9P2H0 1117 aa9.63□□□□□ -0.87
ARFGEF1-204ENST00000518290 RNF113AO15541 343 aaKnown RBP9.63□□□□□ -0.87
ARFGEF1-204ENST00000518290 RNF20Q5VTR2 975 aa9.63□□□□□ -0.87
ARFGEF1-204ENST00000518290 NARFQ9UHQ1 456 aa9.63□□□□□ -0.87
ARFGEF1-204ENST00000518290 ADRA2BP18089 450 aa9.63□□□□□ -0.87
ARFGEF1-204ENST00000518290 RPS6KB1P23443 525 aa9.63□□□□□ -0.87
ARFGEF1-204ENST00000518290 HMGB2P26583 209 aaKnown RBP9.63□□□□□ -0.87
ARFGEF1-204ENST00000518290 ST3GAL1Q11201 340 aa9.63□□□□□ -0.87
ARFGEF1-204ENST00000518290 ANKRD1Q15327 319 aa9.63□□□□□ -0.87
ARFGEF1-204ENST00000518290 PUM3Q15397 648 aaKnown RBP9.63□□□□□ -0.87
ARFGEF1-204ENST00000518290 JARID2Q92833 1246 aaPredicted RBP9.63□□□□□ -0.87
ARFGEF1-204ENST00000518290 USP21Q9UK80 565 aa9.63□□□□□ -0.87
ARFGEF1-204ENST00000518290 TCRBV5S4A2TA0A5A2 114 aa9.62□□□□□ -0.87
ARFGEF1-204ENST00000518290 AK2P54819 239 aa9.62□□□□□ -0.87
ARFGEF1-204ENST00000518290 LPIN2Q92539 896 aa9.62□□□□□ -0.87
ARFGEF1-204ENST00000518290 ZNF594Q96JF6 807 aaPredicted RBP9.62□□□□□ -0.87
ARFGEF1-204ENST00000518290 MAST3O60307 1309 aa9.62□□□□□ -0.87
ARFGEF1-204ENST00000518290 BAG4O95429 457 aaKnown RBP9.62□□□□□ -0.87
ARFGEF1-204ENST00000518290 UQCRFS1P1P0C7P4 283 aa9.62□□□□□ -0.87
ARFGEF1-204ENST00000518290 TTF1Q15361 905 aaPredicted RBP9.62□□□□□ -0.87
ARFGEF1-204ENST00000518290 HMGB1P09429 215 aaKnown RBP9.61□□□□□ -0.87
ARFGEF1-204ENST00000518290 UBE3CQ15386 1083 aa9.61□□□□□ -0.87
ARFGEF1-204ENST00000518290 FAM98CQ17RN3 349 aaKnown RBP9.61□□□□□ -0.87
ARFGEF1-204ENST00000518290 ADCK5Q3MIX3 580 aa9.61□□□□□ -0.87
ARFGEF1-204ENST00000518290 TRMT112Q9UI30 125 aaKnown RBP9.61□□□□□ -0.87
ARFGEF1-204ENST00000518290 KCNQ2O43526 872 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms