RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 UTRNP46939 3433 aa12.31□□□□□ -0.44
CLN8-202ENST00000517514 SNAP23O00161 211 aa12.31□□□□□ -0.44
CLN8-202ENST00000517514 EYA2O00167 538 aa12.31□□□□□ -0.44
CLN8-202ENST00000517514 C21orf2O43822 256 aa12.31□□□□□ -0.44
CLN8-202ENST00000517514 SASH1O94885 1247 aa12.31□□□□□ -0.44
CLN8-202ENST00000517514 HDAC1Q13547 482 aaPredicted RBP12.31□□□□□ -0.44
CLN8-202ENST00000517514 DALRD3Q5D0E6 543 aaKnown RBP12.31□□□□□ -0.44
CLN8-202ENST00000517514 LDHAL6AQ6ZMR3 332 aa12.31□□□□□ -0.44
CLN8-202ENST00000517514 SP8Q8IXZ3 490 aa12.31□□□□□ -0.44
CLN8-202ENST00000517514 VGLL2Q8N8G2 317 aa12.31□□□□□ -0.44
CLN8-202ENST00000517514 ZNF219Q9P2Y4 722 aaPredicted RBP12.31□□□□□ -0.44
CLN8-202ENST00000517514 ARAP2Q8WZ64 1704 aa12.31□□□□□ -0.44
CLN8-202ENST00000517514 CIAO1O76071 339 aa12.3□□□□□ -0.44
CLN8-202ENST00000517514 IGHMBP2P38935 993 aaKnown RBP12.3□□□□□ -0.44
CLN8-202ENST00000517514 GPSM2P81274 684 aa12.3□□□□□ -0.44
CLN8-202ENST00000517514 CHRNDQ07001 517 aa12.3□□□□□ -0.44
CLN8-202ENST00000517514 HELBQ8NG08 1087 aaPredicted RBP12.3□□□□□ -0.44
CLN8-202ENST00000517514 DCTPP1Q9H773 170 aa12.3□□□□□ -0.44
CLN8-202ENST00000517514 BCS1LQ9Y276 419 aa12.3□□□□□ -0.44
CLN8-202ENST00000517514 EXOC6BQ9Y2D4 811 aa12.3□□□□□ -0.44
CLN8-202ENST00000517514 IRS2Q9Y4H2 1338 aa12.3□□□□□ -0.44
CLN8-202ENST00000517514 COL4A5P29400 1685 aa12.29□□□□□ -0.44
CLN8-202ENST00000517514 TAF5LO75529 589 aa12.29□□□□□ -0.44
CLN8-202ENST00000517514 SURF6O75683 361 aaKnown RBP12.29□□□□□ -0.44
CLN8-202ENST00000517514 PRELPP51888 382 aa12.29□□□□□ -0.44
CLN8-202ENST00000517514 FBXO3Q9UK99 471 aa12.29□□□□□ -0.44
CLN8-202ENST00000517514 ZNF646O15015 1829 aaPredicted RBP12.29□□□□□ -0.44
CLN8-202ENST00000517514 NFKBIEO00221 500 aa12.28□□□□□ -0.44
CLN8-202ENST00000517514 TAF7LQ5H9L4 462 aa12.28□□□□□ -0.44
CLN8-202ENST00000517514 TMC4Q7Z404 712 aa12.28□□□□□ -0.44
CLN8-202ENST00000517514 MPHOSPH8Q99549 860 aa12.28□□□□□ -0.44
CLN8-202ENST00000517514 CNNM1Q9NRU3 951 aa12.28□□□□□ -0.44
CLN8-202ENST00000517514 PODXL2Q9NZ53 605 aa12.28□□□□□ -0.44
CLN8-202ENST00000517514 POLLQ9UGP5 575 aa12.28□□□□□ -0.44
CLN8-202ENST00000517514 CHD4Q14839 1912 aa12.28□□□□□ -0.44
CLN8-202ENST00000517514 DICER1Q9UPY3 1922 aaKnown RBP12.27□□□□□ -0.44
CLN8-202ENST00000517514 HMMRO75330 724 aa12.27□□□□□ -0.45
CLN8-202ENST00000517514 NEFLP07196 543 aa12.27□□□□□ -0.45
CLN8-202ENST00000517514 FGFR2P21802 821 aa12.27□□□□□ -0.45
CLN8-202ENST00000517514 IL15P40933 162 aaPredicted RBP12.27□□□□□ -0.45
CLN8-202ENST00000517514 TFCP2Q12800 502 aa12.27□□□□□ -0.45
CLN8-202ENST00000517514 GPR101Q96P66 508 aaPredicted RBP12.27□□□□□ -0.45
CLN8-202ENST00000517514 RTFDC1Q9BY42 306 aaPredicted RBP12.27□□□□□ -0.45
CLN8-202ENST00000517514 MROH5Q6ZUA9 1318 aa12.27□□□□□ -0.45
CLN8-202ENST00000517514 KDM2BQ8NHM5 1336 aa12.27□□□□□ -0.45
CLN8-202ENST00000517514 PDE8BO95263 885 aa12.26□□□□□ -0.45
CLN8-202ENST00000517514 KLRK1P26718 216 aa12.26□□□□□ -0.45
CLN8-202ENST00000517514 CCDC93Q567U6 631 aa12.26□□□□□ -0.45
CLN8-202ENST00000517514 METTL24Q5JXM2 366 aa12.26□□□□□ -0.45
CLN8-202ENST00000517514 ERICH6BQ5W0A0 696 aa12.26□□□□□ -0.45
CLN8-202ENST00000517514 CC2D2BQ6DHV5 1058 aa12.26□□□□□ -0.45
CLN8-202ENST00000517514 TXNRD3Q86VQ6 643 aa12.26□□□□□ -0.45
CLN8-202ENST00000517514 SMC5Q8IY18 1101 aa12.26□□□□□ -0.45
CLN8-202ENST00000517514 MPNDQ8N594 471 aa12.26□□□□□ -0.45
CLN8-202ENST00000517514 TBC1D16Q8TBP0 767 aa12.26□□□□□ -0.45
CLN8-202ENST00000517514 NSFL1CQ9UNZ2 370 aaKnown RBP12.26□□□□□ -0.45
CLN8-202ENST00000517514 ZNF609O15014 1411 aa12.26□□□□□ -0.45
CLN8-202ENST00000517514 SCN9AQ15858 1988 aa12.25□□□□□ -0.45
CLN8-202ENST00000517514 SMARCA5O60264 1052 aaPredicted RBP12.25□□□□□ -0.45
CLN8-202ENST00000517514 RASSF7Q02833 373 aa12.25□□□□□ -0.45
CLN8-202ENST00000517514 G3BP1Q13283 466 aaKnown RBP eCLIP12.25□□□□□ -0.45
CLN8-202ENST00000517514 RHPN1Q8TCX5 695 aa12.25□□□□□ -0.45
CLN8-202ENST00000517514 RWDD1Q9H446 243 aaPredicted RBP12.25□□□□□ -0.45
CLN8-202ENST00000517514 XDHP47989 1333 aa12.25□□□□□ -0.45
CLN8-202ENST00000517514 FKBP4Q02790 459 aaKnown RBP eCLIP12.24□□□□□ -0.45
CLN8-202ENST00000517514 PSME4Q14997 1843 aa12.24□□□□□ -0.45
CLN8-202ENST00000517514 DPP8Q6V1X1 898 aaPredicted RBP12.24□□□□□ -0.45
CLN8-202ENST00000517514 RTKN2Q8IZC4 609 aa12.24□□□□□ -0.45
CLN8-202ENST00000517514 EAF2Q96CJ1 260 aaPredicted RBP12.24□□□□□ -0.45
CLN8-202ENST00000517514 PSMD1Q99460 953 aa12.24□□□□□ -0.45
CLN8-202ENST00000517514 ANKRD2Q9GZV1 360 aa12.24□□□□□ -0.45
CLN8-202ENST00000517514 LTBP3Q9NS15 1303 aa12.24□□□□□ -0.45
CLN8-202ENST00000517514 CEP126Q9P2H0 1117 aa12.24□□□□□ -0.45
CLN8-202ENST00000517514 AKAP11Q9UKA4 1901 aa12.23□□□□□ -0.45
CLN8-202ENST00000517514 ZNF804BA4D1E1 1349 aa12.23□□□□□ -0.45
CLN8-202ENST00000517514 APBB1O00213 710 aa12.23□□□□□ -0.45
CLN8-202ENST00000517514 RAB11FIP3O75154 756 aa12.23□□□□□ -0.45
CLN8-202ENST00000517514 UFL1O94874 794 aa12.23□□□□□ -0.45
CLN8-202ENST00000517514 ATP2B4P23634 1241 aa12.23□□□□□ -0.45
CLN8-202ENST00000517514 ADORA1P30542 326 aa12.23□□□□□ -0.45
CLN8-202ENST00000517514 TIMM10P62072 90 aa12.23□□□□□ -0.45
CLN8-202ENST00000517514 UBE4AQ14139 1066 aa12.23□□□□□ -0.45
CLN8-202ENST00000517514 SOGA3Q5TF21 947 aa12.23□□□□□ -0.45
CLN8-202ENST00000517514 B4GALNT3Q6L9W6 998 aa12.23□□□□□ -0.45
CLN8-202ENST00000517514 C15orf52Q6ZUT6 534 aaKnown RBP12.23□□□□□ -0.45
CLN8-202ENST00000517514 PELP1Q8IZL8 1130 aaKnown RBP12.23□□□□□ -0.45
CLN8-202ENST00000517514 IL1RAPL2Q9NP60 686 aa12.23□□□□□ -0.45
CLN8-202ENST00000517514 GPR108Q9NPR9 543 aa12.23□□□□□ -0.45
CLN8-202ENST00000517514 PPP4R2Q9NY27 417 aa12.23□□□□□ -0.45
CLN8-202ENST00000517514 TLR7Q9NYK1 1049 aaKnown RBP12.23□□□□□ -0.45
CLN8-202ENST00000517514 ANKIB1Q9P2G1 1089 aa12.23□□□□□ -0.45
CLN8-202ENST00000517514 GGA1Q9UJY5 639 aa12.23□□□□□ -0.45
CLN8-202ENST00000517514 LEMD3Q9Y2U8 911 aa12.23□□□□□ -0.45
CLN8-202ENST00000517514 TIAM2Q8IVF5 1701 aa12.23□□□□□ -0.45
CLN8-202ENST00000517514 MYH13Q9UKX3 1938 aa12.22□□□□□ -0.45
CLN8-202ENST00000517514 OS9Q13438 667 aaPredicted RBP12.22□□□□□ -0.45
CLN8-202ENST00000517514 ATP2B3Q16720 1220 aa12.22□□□□□ -0.45
CLN8-202ENST00000517514 GRIPAP1Q4V328 841 aa12.22□□□□□ -0.45
CLN8-202ENST00000517514 HSP90AB4PQ58FF6 505 aa12.22□□□□□ -0.45
CLN8-202ENST00000517514 TNNI3KQ59H18 835 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms