RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 SASH3O75995 380 aa4.78□□□□□ -1.64
SCARNA15.2-201ENST00000516409 UPP2O95045 317 aa4.78□□□□□ -1.64
SCARNA15.2-201ENST00000516409 EGFRP00533 1210 aa4.78□□□□□ -1.64
SCARNA15.2-201ENST00000516409 CTC1Q2NKJ3 1217 aa4.78□□□□□ -1.64
SCARNA15.2-201ENST00000516409 EGFLAMQ63HQ2 1017 aa4.78□□□□□ -1.64
SCARNA15.2-201ENST00000516409 RELL1Q8IUW5 271 aa4.78□□□□□ -1.64
SCARNA15.2-201ENST00000516409 EAF1Q96JC9 268 aaPredicted RBP4.78□□□□□ -1.64
SCARNA15.2-201ENST00000516409 RSRP1Q9BUV0 290 aa4.78□□□□□ -1.64
SCARNA15.2-201ENST00000516409 ZCCHC2Q9C0B9 1178 aaKnown RBP4.78□□□□□ -1.64
SCARNA15.2-201ENST00000516409 GINM1Q9NU53 330 aa4.78□□□□□ -1.64
SCARNA15.2-201ENST00000516409 AKAP2Q9Y2D5 859 aa4.78□□□□□ -1.64
SCARNA15.2-201ENST00000516409 EFR3BQ9Y2G0 817 aa4.78□□□□□ -1.64
SCARNA15.2-201ENST00000516409 MRVI1Q9Y6F6 885 aa4.78□□□□□ -1.64
SCARNA15.2-201ENST00000516409 FIGNL2A6NMB9 653 aa4.77□□□□□ -1.65
SCARNA15.2-201ENST00000516409 K7ELQ4 463 aaPredicted RBP4.77□□□□□ -1.65
SCARNA15.2-201ENST00000516409 ACPPP15309 386 aa4.77□□□□□ -1.65
SCARNA15.2-201ENST00000516409 ETFBP38117 255 aa4.77□□□□□ -1.65
SCARNA15.2-201ENST00000516409 EIF4A3P38919 411 aaKnown RBP4.77□□□□□ -1.65
SCARNA15.2-201ENST00000516409 FAM160A1Q05DH4 1040 aa4.77□□□□□ -1.65
SCARNA15.2-201ENST00000516409 TCEAL1Q15170 157 aa4.77□□□□□ -1.65
SCARNA15.2-201ENST00000516409 WDR44Q5JSH3 913 aa4.77□□□□□ -1.65
SCARNA15.2-201ENST00000516409 DTHD1Q6ZMT9 781 aa4.77□□□□□ -1.65
SCARNA15.2-201ENST00000516409 ZNF296Q8WUU4 475 aaPredicted RBP4.77□□□□□ -1.65
SCARNA15.2-201ENST00000516409 PMEPA1Q969W9 287 aa4.77□□□□□ -1.65
SCARNA15.2-201ENST00000516409 MRFAP1L1Q96HT8 127 aa4.77□□□□□ -1.65
SCARNA15.2-201ENST00000516409 SEC16BQ96JE7 1060 aa4.77□□□□□ -1.65
SCARNA15.2-201ENST00000516409 TMEM74Q96NL1 305 aa4.77□□□□□ -1.65
SCARNA15.2-201ENST00000516409 LIN7BQ9HAP6 207 aa4.77□□□□□ -1.65
SCARNA15.2-201ENST00000516409 ABCB6Q9NP58 842 aa4.77□□□□□ -1.65
SCARNA15.2-201ENST00000516409 TRAK1Q9UPV9 953 aa4.77□□□□□ -1.65
SCARNA15.2-201ENST00000516409 MRPL42Q9Y6G3 142 aaKnown RBP4.77□□□□□ -1.65
SCARNA15.2-201ENST00000516409 TMEM238LA0A1B0GVL6 79 aa4.76□□□□□ -1.65
SCARNA15.2-201ENST00000516409 PHF20L1A8MW92 1017 aa4.76□□□□□ -1.65
SCARNA15.2-201ENST00000516409 MMP20O60882 483 aa4.76□□□□□ -1.65
SCARNA15.2-201ENST00000516409 CELA3AP09093 270 aa4.76□□□□□ -1.65
SCARNA15.2-201ENST00000516409 EDN3P14138 238 aa4.76□□□□□ -1.65
SCARNA15.2-201ENST00000516409 TARSP26639 723 aaKnown RBP4.76□□□□□ -1.65
SCARNA15.2-201ENST00000516409 NFX1Q12986 1120 aaKnown RBP4.76□□□□□ -1.65
SCARNA15.2-201ENST00000516409 SERINC3Q13530 473 aa4.76□□□□□ -1.65
SCARNA15.2-201ENST00000516409 PWP1Q13610 501 aa4.76□□□□□ -1.65
SCARNA15.2-201ENST00000516409 NFE2L2Q16236 605 aa4.76□□□□□ -1.65
SCARNA15.2-201ENST00000516409 PRPF40BQ6NWY9 871 aaKnown RBP4.76□□□□□ -1.65
SCARNA15.2-201ENST00000516409 FBXL19Q6PCT2 694 aa4.76□□□□□ -1.65
SCARNA15.2-201ENST00000516409 TPTE2Q6XPS3 522 aa4.76□□□□□ -1.65
SCARNA15.2-201ENST00000516409 ANKS3Q6ZW76 656 aa4.76□□□□□ -1.65
SCARNA15.2-201ENST00000516409 SPACA7Q96KW9 195 aa4.76□□□□□ -1.65
SCARNA15.2-201ENST00000516409 CRISPLD1Q9H336 500 aa4.76□□□□□ -1.65
SCARNA15.2-201ENST00000516409 PPP4R2Q9NY27 417 aa4.76□□□□□ -1.65
SCARNA15.2-201ENST00000516409 SALL4Q9UJQ4 1053 aa4.76□□□□□ -1.65
SCARNA15.2-201ENST00000516409 TLR6Q9Y2C9 796 aa4.76□□□□□ -1.65
SCARNA15.2-201ENST00000516409 TTLL8A6PVC2 850 aa4.75□□□□□ -1.65
SCARNA15.2-201ENST00000516409 TRPA1O75762 1119 aa4.75□□□□□ -1.65
SCARNA15.2-201ENST00000516409 PF4P02776 101 aa4.75□□□□□ -1.65
SCARNA15.2-201ENST00000516409 LIG3P49916 1009 aa4.75□□□□□ -1.65
SCARNA15.2-201ENST00000516409 SFSWAPQ12872 951 aaKnown RBP4.75□□□□□ -1.65
SCARNA15.2-201ENST00000516409 COL13A1Q5TAT6 717 aaPredicted RBP4.75□□□□□ -1.65
SCARNA15.2-201ENST00000516409 MRPL14Q6P1L8 145 aaKnown RBP4.75□□□□□ -1.65
SCARNA15.2-201ENST00000516409 TRIM67Q6ZTA4 783 aa4.75□□□□□ -1.65
SCARNA15.2-201ENST00000516409 PHC3Q8NDX5 983 aa4.75□□□□□ -1.65
SCARNA15.2-201ENST00000516409 OR13H1Q8NG92 308 aa4.75□□□□□ -1.65
SCARNA15.2-201ENST00000516409 HNRNPLLQ8WVV9 542 aaKnown RBP4.75□□□□□ -1.65
SCARNA15.2-201ENST00000516409 GPATCH3Q96I76 525 aa4.75□□□□□ -1.65
SCARNA15.2-201ENST00000516409 RHOVQ96L33 236 aa4.75□□□□□ -1.65
SCARNA15.2-201ENST00000516409 CNTNAP3BQ96NU0 1288 aa4.75□□□□□ -1.65
SCARNA15.2-201ENST00000516409 TCF12Q99081 682 aa4.75□□□□□ -1.65
SCARNA15.2-201ENST00000516409 GAS2L1Q99501 681 aaPredicted RBP4.75□□□□□ -1.65
SCARNA15.2-201ENST00000516409 ZKSCAN3Q9BRR0 538 aa4.75□□□□□ -1.65
SCARNA15.2-201ENST00000516409 CNTNAP3Q9BZ76 1288 aa4.75□□□□□ -1.65
SCARNA15.2-201ENST00000516409 UBP1Q9NZI7 540 aa4.75□□□□□ -1.65
SCARNA15.2-201ENST00000516409 ZFATQ9P243 1243 aa4.75□□□□□ -1.65
SCARNA15.2-201ENST00000516409 PPM1HQ9ULR3 514 aa4.75□□□□□ -1.65
SCARNA15.2-201ENST00000516409 KCNH4Q9UQ05 1017 aa4.75□□□□□ -1.65
SCARNA15.2-201ENST00000516409 METTL12A8MUP2 240 aa4.74□□□□□ -1.65
SCARNA15.2-201ENST00000516409 RARAP10276 462 aa4.74□□□□□ -1.65
SCARNA15.2-201ENST00000516409 XRCC5P13010 732 aaKnown RBP4.74□□□□□ -1.65
SCARNA15.2-201ENST00000516409 BMP1P13497 986 aa4.74□□□□□ -1.65
SCARNA15.2-201ENST00000516409 GARTP22102 1010 aa4.74□□□□□ -1.65
SCARNA15.2-201ENST00000516409 SOX9P48436 509 aa4.74□□□□□ -1.65
SCARNA15.2-201ENST00000516409 CCINQ13939 588 aa4.74□□□□□ -1.65
SCARNA15.2-201ENST00000516409 GRIN2CQ14957 1233 aa4.74□□□□□ -1.65
SCARNA15.2-201ENST00000516409 SNAP47Q5SQN1 464 aa4.74□□□□□ -1.65
SCARNA15.2-201ENST00000516409 IFFO2Q5TF58 517 aa4.74□□□□□ -1.65
SCARNA15.2-201ENST00000516409 NBPF6Q5VWK0 638 aa4.74□□□□□ -1.65
SCARNA15.2-201ENST00000516409 SPNS2Q8IVW8 549 aa4.74□□□□□ -1.65
SCARNA15.2-201ENST00000516409 PGBD3Q8N328 593 aa4.74□□□□□ -1.65
SCARNA15.2-201ENST00000516409 ANAPC16Q96DE5 110 aa4.74□□□□□ -1.65
SCARNA15.2-201ENST00000516409 NBPF4Q96M43 638 aa4.74□□□□□ -1.65
SCARNA15.2-201ENST00000516409 SRPK1Q96SB4 655 aaKnown RBP4.74□□□□□ -1.65
SCARNA15.2-201ENST00000516409 OSMRQ99650 979 aa4.74□□□□□ -1.65
SCARNA15.2-201ENST00000516409 NT5C1AQ9BXI3 368 aa4.74□□□□□ -1.65
SCARNA15.2-201ENST00000516409 TRIM55Q9BYV6 548 aa4.74□□□□□ -1.65
SCARNA15.2-201ENST00000516409 A0A0G2JS52 829 aa4.73□□□□□ -1.65
SCARNA15.2-201ENST00000516409 DCDC2BA2VCK2 349 aa4.73□□□□□ -1.65
SCARNA15.2-201ENST00000516409 CCDC85CA6NKD9 419 aa4.73□□□□□ -1.65
SCARNA15.2-201ENST00000516409 KLF4O43474 513 aa4.73□□□□□ -1.65
SCARNA15.2-201ENST00000516409 NFKB1P19838 968 aa4.73□□□□□ -1.65
SCARNA15.2-201ENST00000516409 CRKP46108 304 aa4.73□□□□□ -1.65
SCARNA15.2-201ENST00000516409 GRIA4P48058 902 aa4.73□□□□□ -1.65
SCARNA15.2-201ENST00000516409 CAMK2GQ13555 558 aaPredicted RBP4.73□□□□□ -1.65
SCARNA15.2-201ENST00000516409 SPRED3Q2MJR0 410 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms