RNA–Protein interactions for RNA: ENST00000515798.5

BRIX1-205, Transcript of BRX1, biogenesis of ribosomes, humanhuman

TSL 2

Gene BRIX1, Length 2,196 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIX1-205ENST00000515798 GOLGA6L4A6NEF3 574 aa12.42□□□□□ -0.42
BRIX1-205ENST00000515798 BECN2A8MW95 431 aa12.42□□□□□ -0.42
BRIX1-205ENST00000515798 SHOX2O60902 331 aaPredicted RBP12.42□□□□□ -0.42
BRIX1-205ENST00000515798 VAMP4O75379 141 aa12.42□□□□□ -0.42
BRIX1-205ENST00000515798 IPO7O95373 1038 aaKnown RBP12.42□□□□□ -0.42
BRIX1-205ENST00000515798 PAX7P23759 505 aa12.42□□□□□ -0.42
BRIX1-205ENST00000515798 CHMLP26374 656 aa12.42□□□□□ -0.42
BRIX1-205ENST00000515798 GJB2P29033 226 aa12.42□□□□□ -0.42
BRIX1-205ENST00000515798 GNL2Q13823 731 aaKnown RBP12.42□□□□□ -0.42
BRIX1-205ENST00000515798 TTC19Q6DKK2 380 aaPredicted RBP12.42□□□□□ -0.42
BRIX1-205ENST00000515798 DHX40Q8IX18 779 aaKnown RBP12.42□□□□□ -0.42
BRIX1-205ENST00000515798 MSANTD4Q8NCY6 345 aa12.42□□□□□ -0.42
BRIX1-205ENST00000515798 BICD2Q8TD16 824 aa12.42□□□□□ -0.42
BRIX1-205ENST00000515798 FAM169AQ9Y6X4 670 aa12.42□□□□□ -0.42
BRIX1-205ENST00000515798 COL3A1P02461 1466 aaPredicted RBP12.41□□□□□ -0.42
BRIX1-205ENST00000515798 NRXN1Q9ULB1 1477 aa12.41□□□□□ -0.42
BRIX1-205ENST00000515798 GLI2P10070 1586 aa12.41□□□□□ -0.42
BRIX1-205ENST00000515798 ABCA9Q8IUA7 1624 aa12.41□□□□□ -0.42
BRIX1-205ENST00000515798 CHD2O14647 1828 aaKnown RBP12.41□□□□□ -0.42
BRIX1-205ENST00000515798 GOLGA6L9A6NEM1 432 aa12.41□□□□□ -0.42
BRIX1-205ENST00000515798 C11orf57Q6ZUT1 292 aaPredicted RBP12.41□□□□□ -0.42
BRIX1-205ENST00000515798 ZKSCAN4Q969J2 545 aaPredicted RBP12.41□□□□□ -0.42
BRIX1-205ENST00000515798 ZSCAN31Q96LW9 406 aaPredicted RBP12.41□□□□□ -0.42
BRIX1-205ENST00000515798 GBP3Q9H0R5 595 aa12.41□□□□□ -0.42
BRIX1-205ENST00000515798 NEURL4Q96JN8 1562 aa12.4□□□□□ -0.42
BRIX1-205ENST00000515798 ANKRD18BA2A2Z9 1011 aa12.4□□□□□ -0.42
BRIX1-205ENST00000515798 EBAG9O00559 213 aa12.4□□□□□ -0.42
BRIX1-205ENST00000515798 FANCGO15287 622 aa12.4□□□□□ -0.42
BRIX1-205ENST00000515798 TUBBP07437 444 aa12.4□□□□□ -0.42
BRIX1-205ENST00000515798 INPP5BP32019 993 aa12.4□□□□□ -0.42
BRIX1-205ENST00000515798 RUFY3Q7L099 469 aa12.4□□□□□ -0.42
BRIX1-205ENST00000515798 AFAP1L1Q8TED9 768 aa12.4□□□□□ -0.42
BRIX1-205ENST00000515798 NUCKS1Q9H1E3 243 aaKnown RBP12.4□□□□□ -0.42
BRIX1-205ENST00000515798 SH2B1Q9NRF2 756 aaPredicted RBP12.4□□□□□ -0.42
BRIX1-205ENST00000515798 SALL3Q9BXA9 1300 aa12.4□□□□□ -0.42
BRIX1-205ENST00000515798 ZSCAN12O43309 604 aa12.4□□□□□ -0.42
BRIX1-205ENST00000515798 NEFHP12036 1026 aa12.4□□□□□ -0.42
BRIX1-205ENST00000515798 AK2P54819 239 aa12.4□□□□□ -0.42
BRIX1-205ENST00000515798 RWDD2BP57060 319 aa12.4□□□□□ -0.42
BRIX1-205ENST00000515798 CEP85Q6P2H3 762 aa12.4□□□□□ -0.42
BRIX1-205ENST00000515798 THUMPD2Q9BTF0 503 aaKnown RBP12.4□□□□□ -0.42
BRIX1-205ENST00000515798 SETD1AO15047 1707 aaKnown RBP12.4□□□□□ -0.43
BRIX1-205ENST00000515798 KIAA0232Q92628 1395 aa12.39□□□□□ -0.43
BRIX1-205ENST00000515798 SOS1Q07889 1333 aaPredicted RBP12.39□□□□□ -0.43
BRIX1-205ENST00000515798 GIGYF1O75420 1035 aaPredicted RBP12.39□□□□□ -0.43
BRIX1-205ENST00000515798 FSBPO95073 299 aa12.39□□□□□ -0.43
BRIX1-205ENST00000515798 TRAF1Q13077 416 aa12.39□□□□□ -0.43
BRIX1-205ENST00000515798 MCM6Q14566 821 aa12.39□□□□□ -0.43
BRIX1-205ENST00000515798 ARMC2Q8NEN0 867 aa12.39□□□□□ -0.43
BRIX1-205ENST00000515798 ZNF483Q8TF39 744 aaPredicted RBP12.39□□□□□ -0.43
BRIX1-205ENST00000515798 SYTL4Q96C24 671 aaPredicted RBP12.39□□□□□ -0.43
BRIX1-205ENST00000515798 PAIP2Q9BPZ3 127 aaKnown RBP12.39□□□□□ -0.43
BRIX1-205ENST00000515798 FAM204AQ9H8W3 233 aa12.39□□□□□ -0.43
BRIX1-205ENST00000515798 VIPAS39Q9H9C1 493 aa12.39□□□□□ -0.43
BRIX1-205ENST00000515798 SLC24A3Q9HC58 644 aa12.39□□□□□ -0.43
BRIX1-205ENST00000515798 ANO10Q9NW15 660 aa12.39□□□□□ -0.43
BRIX1-205ENST00000515798 ODF2LQ9ULJ1 636 aa12.39□□□□□ -0.43
BRIX1-205ENST00000515798 CDK12Q9NYV4 1490 aaPredicted RBP12.39□□□□□ -0.43
BRIX1-205ENST00000515798 ASXL2Q76L83 1435 aa12.39□□□□□ -0.43
BRIX1-205ENST00000515798 N4BP1O75113 896 aaKnown RBP12.39□□□□□ -0.43
BRIX1-205ENST00000515798 NR1I2O75469 434 aa12.39□□□□□ -0.43
BRIX1-205ENST00000515798 FNTAP49354 379 aa12.39□□□□□ -0.43
BRIX1-205ENST00000515798 AARSP49588 968 aaKnown RBP eCLIP12.39□□□□□ -0.43
BRIX1-205ENST00000515798 OS9Q13438 667 aaPredicted RBP12.39□□□□□ -0.43
BRIX1-205ENST00000515798 CEP112Q8N8E3 955 aa12.39□□□□□ -0.43
BRIX1-205ENST00000515798 CCDC26Q8TAB7 109 aa12.39□□□□□ -0.43
BRIX1-205ENST00000515798 ERCC4Q92889 916 aaPredicted RBP12.39□□□□□ -0.43
BRIX1-205ENST00000515798 SPATA32Q96LK8 384 aa12.39□□□□□ -0.43
BRIX1-205ENST00000515798 A0A1B0GUA9 196 aa12.38□□□□□ -0.43
BRIX1-205ENST00000515798 ANKRD18AQ8IVF6 992 aa12.38□□□□□ -0.43
BRIX1-205ENST00000515798 LEO1Q8WVC0 666 aaPredicted RBP12.38□□□□□ -0.43
BRIX1-205ENST00000515798 BAG1Q99933 345 aaPredicted RBP12.38□□□□□ -0.43
BRIX1-205ENST00000515798 SPATS2LQ9NUQ6 558 aaKnown RBP12.38□□□□□ -0.43
BRIX1-205ENST00000515798 TRPM2O94759 1503 aa12.38□□□□□ -0.43
BRIX1-205ENST00000515798 PDCP20941 246 aa12.37□□□□□ -0.43
BRIX1-205ENST00000515798 ISM2Q6H9L7 571 aa12.37□□□□□ -0.43
BRIX1-205ENST00000515798 IQCA1Q86XH1 822 aa12.37□□□□□ -0.43
BRIX1-205ENST00000515798 CEP57L1Q8IYX8 460 aa12.37□□□□□ -0.43
BRIX1-205ENST00000515798 NAT10Q9H0A0 1025 aaKnown RBP12.37□□□□□ -0.43
BRIX1-205ENST00000515798 CHMP3Q9Y3E7 222 aa12.37□□□□□ -0.43
BRIX1-205ENST00000515798 VPS37CA5D8V6 355 aaPredicted RBP12.37□□□□□ -0.43
BRIX1-205ENST00000515798 PRPF6O94906 941 aaKnown RBP12.37□□□□□ -0.43
BRIX1-205ENST00000515798 CASP8Q14790 479 aa12.37□□□□□ -0.43
BRIX1-205ENST00000515798 TMC6Q7Z403 805 aa12.37□□□□□ -0.43
BRIX1-205ENST00000515798 SPATS2Q86XZ4 545 aaKnown RBP12.37□□□□□ -0.43
BRIX1-205ENST00000515798 ANKZF1Q9H8Y5 726 aa12.37□□□□□ -0.43
BRIX1-205ENST00000515798 ZBTB12Q9Y330 459 aaPredicted RBP12.37□□□□□ -0.43
BRIX1-205ENST00000515798 VWA3AA6NCI4 1184 aa12.36□□□□□ -0.43
BRIX1-205ENST00000515798 TUBB2AQ13885 445 aa12.36□□□□□ -0.43
BRIX1-205ENST00000515798 WWC2Q6AWC2 1192 aa12.36□□□□□ -0.43
BRIX1-205ENST00000515798 SRGAP1Q7Z6B7 1085 aa12.36□□□□□ -0.43
BRIX1-205ENST00000515798 CLIC6Q96NY7 704 aa12.36□□□□□ -0.43
BRIX1-205ENST00000515798 BPIFA3Q9BQP9 254 aa12.36□□□□□ -0.43
BRIX1-205ENST00000515798 TUBB2BQ9BVA1 445 aa12.36□□□□□ -0.43
BRIX1-205ENST00000515798 PLEKHA4Q9H4M7 779 aa12.36□□□□□ -0.43
BRIX1-205ENST00000515798 SNX14Q9Y5W7 946 aa12.36□□□□□ -0.43
BRIX1-205ENST00000515798 CDC42BPGQ6DT37 1551 aa12.36□□□□□ -0.43
BRIX1-205ENST00000515798 RPGRIP1LQ68CZ1 1315 aa12.36□□□□□ -0.43
BRIX1-205ENST00000515798 COQ9O75208 318 aa12.36□□□□□ -0.43
BRIX1-205ENST00000515798 MAGEC3Q8TD91 643 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms