RNA–Protein interactions for RNA: ENST00000515546.1

HMGCLL1-209, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 4

Gene HMGCLL1, Length 569 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-209ENST00000515546 PNMA8AQ86V59 439 aaPredicted RBP18.82■□□□□ 0.6
HMGCLL1-209ENST00000515546 SRCIN1Q9C0H9 1055 aa18.82■□□□□ 0.6
HMGCLL1-209ENST00000515546 UFL1O94874 794 aa18.81■□□□□ 0.6
HMGCLL1-209ENST00000515546 ITGA6P23229 1130 aa18.81■□□□□ 0.6
HMGCLL1-209ENST00000515546 LMOD1P29536 600 aaPredicted RBP18.81■□□□□ 0.6
HMGCLL1-209ENST00000515546 CIAPIN1Q6FI81 312 aa18.81■□□□□ 0.6
HMGCLL1-209ENST00000515546 GPR101Q96P66 508 aaPredicted RBP18.81■□□□□ 0.6
HMGCLL1-209ENST00000515546 GPRC5DQ9NZD1 345 aa18.81■□□□□ 0.6
HMGCLL1-209ENST00000515546 ANKIB1Q9P2G1 1089 aa18.81■□□□□ 0.6
HMGCLL1-209ENST00000515546 GGA1Q9UJY5 639 aa18.81■□□□□ 0.6
HMGCLL1-209ENST00000515546 UTYO14607 1347 aa18.8■□□□□ 0.6
HMGCLL1-209ENST00000515546 EPS15P42566 896 aa18.8■□□□□ 0.6
HMGCLL1-209ENST00000515546 TNIP1Q15025 636 aa18.8■□□□□ 0.6
HMGCLL1-209ENST00000515546 SLC4A10Q6U841 1118 aa18.8■□□□□ 0.6
HMGCLL1-209ENST00000515546 DNAJC5GQ8N7S2 189 aa18.8■□□□□ 0.6
HMGCLL1-209ENST00000515546 MINPP1Q9UNW1 487 aa18.8■□□□□ 0.6
HMGCLL1-209ENST00000515546 PASKQ96RG2 1323 aa18.79■□□□□ 0.6
HMGCLL1-209ENST00000515546 RIMBP2O15034 1052 aa18.79■□□□□ 0.6
HMGCLL1-209ENST00000515546 RAD17O75943 681 aa18.79■□□□□ 0.6
HMGCLL1-209ENST00000515546 GMPSP49915 693 aaPredicted RBP18.79■□□□□ 0.6
HMGCLL1-209ENST00000515546 EAPPQ56P03 285 aaPredicted RBP18.79■□□□□ 0.6
HMGCLL1-209ENST00000515546 BCL2L13Q9BXK5 485 aa18.79■□□□□ 0.6
HMGCLL1-209ENST00000515546 DBNDD1Q9H9R9 158 aa18.79■□□□□ 0.6
HMGCLL1-209ENST00000515546 ZNF609O15014 1411 aa18.78■□□□□ 0.6
HMGCLL1-209ENST00000515546 ECE2O60344 883 aa18.78■□□□□ 0.6
HMGCLL1-209ENST00000515546 ATP2B4P23634 1241 aa18.78■□□□□ 0.6
HMGCLL1-209ENST00000515546 IGHMBP2P38935 993 aaKnown RBP18.78■□□□□ 0.6
HMGCLL1-209ENST00000515546 EPHA10Q5JZY3 1008 aa18.78■□□□□ 0.6
HMGCLL1-209ENST00000515546 ZC3H12CQ9C0D7 883 aaKnown RBP18.78■□□□□ 0.6
HMGCLL1-209ENST00000515546 SMC4Q9NTJ3 1288 aa18.78■□□□□ 0.6
HMGCLL1-209ENST00000515546 MED23Q9ULK4 1368 aa18.78■□□□□ 0.6
HMGCLL1-209ENST00000515546 BRPF1P55201 1214 aaPredicted RBP18.77■□□□□ 0.6
HMGCLL1-209ENST00000515546 HTRA3P83110 453 aa18.77■□□□□ 0.6
HMGCLL1-209ENST00000515546 USP50Q70EL3 339 aaPredicted RBP18.77■□□□□ 0.6
HMGCLL1-209ENST00000515546 C9orf78Q9NZ63 289 aaPredicted RBP18.77■□□□□ 0.6
HMGCLL1-209ENST00000515546 SCN9AQ15858 1988 aa18.77■□□□□ 0.59
HMGCLL1-209ENST00000515546 A0A1B0GUL6 1792 aa18.76■□□□□ 0.59
HMGCLL1-209ENST00000515546 ANKRD18BA2A2Z9 1011 aa18.76■□□□□ 0.59
HMGCLL1-209ENST00000515546 ITGBL1O95965 494 aaPredicted RBP18.76■□□□□ 0.59
HMGCLL1-209ENST00000515546 DOK7Q18PE1 504 aa18.76■□□□□ 0.59
HMGCLL1-209ENST00000515546 KAZALD1Q96I82 304 aa18.76■□□□□ 0.59
HMGCLL1-209ENST00000515546 ADARB2Q9NS39 739 aaKnown RBP18.76■□□□□ 0.59
HMGCLL1-209ENST00000515546 PSME4Q14997 1843 aa18.76■□□□□ 0.59
HMGCLL1-209ENST00000515546 WTIPA6NIX2 430 aaPredicted RBP18.75■□□□□ 0.59
HMGCLL1-209ENST00000515546 PSMD14O00487 310 aa18.75■□□□□ 0.59
HMGCLL1-209ENST00000515546 NBPF7P0C2Y1 421 aaPredicted RBP18.75■□□□□ 0.59
HMGCLL1-209ENST00000515546 CCT4P50991 539 aaKnown RBP18.75■□□□□ 0.59
HMGCLL1-209ENST00000515546 IFIT5Q13325 482 aaKnown RBP18.75■□□□□ 0.59
HMGCLL1-209ENST00000515546 LMBR1LQ6UX01 489 aa18.75■□□□□ 0.59
HMGCLL1-209ENST00000515546 DPF2Q92785 391 aa18.74■□□□□ 0.59
HMGCLL1-209ENST00000515546 SUCLG2Q96I99 432 aa18.74■□□□□ 0.59
HMGCLL1-209ENST00000515546 MPHOSPH8Q99549 860 aa18.74■□□□□ 0.59
HMGCLL1-209ENST00000515546 ANKRD2Q9GZV1 360 aa18.74■□□□□ 0.59
HMGCLL1-209ENST00000515546 KCNQ5Q9NR82 932 aa18.74■□□□□ 0.59
HMGCLL1-209ENST00000515546 LEMD3Q9Y2U8 911 aa18.74■□□□□ 0.59
HMGCLL1-209ENST00000515546 ZNF646O15015 1829 aaPredicted RBP18.73■□□□□ 0.59
HMGCLL1-209ENST00000515546 RPS12P25398 132 aaKnown RBP18.73■□□□□ 0.59
HMGCLL1-209ENST00000515546 RARSP54136 660 aaKnown RBP18.73■□□□□ 0.59
HMGCLL1-209ENST00000515546 RABL6Q3YEC7 729 aaPredicted RBP18.73■□□□□ 0.59
HMGCLL1-209ENST00000515546 MAP1SQ66K74 1059 aaPredicted RBP18.73■□□□□ 0.59
HMGCLL1-209ENST00000515546 KLRG1Q96E93 195 aa18.73■□□□□ 0.59
HMGCLL1-209ENST00000515546 CLEC11AQ9Y240 323 aa18.73■□□□□ 0.59
HMGCLL1-209ENST00000515546 VIL1P09327 827 aaKnown RBP18.72■□□□□ 0.59
HMGCLL1-209ENST00000515546 CNTROBQ8N137 903 aa18.72■□□□□ 0.59
HMGCLL1-209ENST00000515546 CREBZFQ9NS37 354 aa18.72■□□□□ 0.59
HMGCLL1-209ENST00000515546 ZBTB12Q9Y330 459 aaPredicted RBP18.72■□□□□ 0.59
HMGCLL1-209ENST00000515546 ZNF804BA4D1E1 1349 aa18.72■□□□□ 0.59
HMGCLL1-209ENST00000515546 IRS2Q9Y4H2 1338 aa18.72■□□□□ 0.59
HMGCLL1-209ENST00000515546 SHTN1A0MZ66 631 aa18.71■□□□□ 0.59
HMGCLL1-209ENST00000515546 CHRNDQ07001 517 aa18.71■□□□□ 0.59
HMGCLL1-209ENST00000515546 CCDC57Q2TAC2 916 aa18.71■□□□□ 0.59
HMGCLL1-209ENST00000515546 PODNQ7Z5L7 613 aa18.71■□□□□ 0.59
HMGCLL1-209ENST00000515546 MICALL2Q8IY33 904 aa18.71■□□□□ 0.59
HMGCLL1-209ENST00000515546 ANKRD44Q8N8A2 993 aa18.71■□□□□ 0.59
HMGCLL1-209ENST00000515546 TRPM4Q8TD43 1214 aa18.71■□□□□ 0.59
HMGCLL1-209ENST00000515546 USP44Q9H0E7 712 aa18.71■□□□□ 0.59
HMGCLL1-209ENST00000515546 PGAP2Q9UHJ9 254 aa18.71■□□□□ 0.59
HMGCLL1-209ENST00000515546 CNOT7Q9UIV1 285 aaKnown RBP18.71■□□□□ 0.59
HMGCLL1-209ENST00000515546 CHMP3Q9Y3E7 222 aa18.71■□□□□ 0.59
HMGCLL1-209ENST00000515546 HNRNPUQ00839 825 aaKnown RBP eCLIP18.7■□□□□ 0.58
HMGCLL1-209ENST00000515546 BICC1Q9H694 974 aaKnown RBP18.7■□□□□ 0.58
HMGCLL1-209ENST00000515546 NOB1Q9ULX3 412 aaKnown RBP18.7■□□□□ 0.58
HMGCLL1-209ENST00000515546 KIF16BQ96L93 1317 aa18.7■□□□□ 0.58
HMGCLL1-209ENST00000515546 G3V3G9 751 aa18.69■□□□□ 0.58
HMGCLL1-209ENST00000515546 KLRK1P26718 216 aa18.69■□□□□ 0.58
HMGCLL1-209ENST00000515546 HIRAP54198 1017 aaPredicted RBP18.69■□□□□ 0.58
HMGCLL1-209ENST00000515546 DCAF8Q5TAQ9 597 aa18.69■□□□□ 0.58
HMGCLL1-209ENST00000515546 TXNRD3Q86VQ6 643 aa18.69■□□□□ 0.58
HMGCLL1-209ENST00000515546 JMYQ8N9B5 988 aa18.69■□□□□ 0.58
HMGCLL1-209ENST00000515546 ZC3H15Q8WU90 426 aaKnown RBP18.69■□□□□ 0.58
HMGCLL1-209ENST00000515546 API5Q9BZZ5 524 aaKnown RBP18.69■□□□□ 0.58
HMGCLL1-209ENST00000515546 COA1Q9GZY4 146 aa18.69■□□□□ 0.58
HMGCLL1-209ENST00000515546 H7C1D1 291 aa18.68■□□□□ 0.58
HMGCLL1-209ENST00000515546 RSBN1LQ6PCB5 846 aaPredicted RBP18.68■□□□□ 0.58
HMGCLL1-209ENST00000515546 C15orf52Q6ZUT6 534 aaKnown RBP18.68■□□□□ 0.58
HMGCLL1-209ENST00000515546 ZNF594Q96JF6 807 aaPredicted RBP18.68■□□□□ 0.58
HMGCLL1-209ENST00000515546 GMLQ99445 158 aa18.68■□□□□ 0.58
HMGCLL1-209ENST00000515546 PCNTO95613 3336 aa18.68■□□□□ 0.58
HMGCLL1-209ENST00000515546 USP17L3A6NCW0 530 aa18.67■□□□□ 0.58
HMGCLL1-209ENST00000515546 USP17L4A6NCW7 530 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms