RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 PUS3Q9BZE2 481 aaKnown RBP26.01■■□□□ 1.75
LSM6-207ENST00000515311 ATP6V0A2Q9Y487 856 aa26.01■■□□□ 1.75
LSM6-207ENST00000515311 G3BP1Q13283 466 aaKnown RBP eCLIP26■■□□□ 1.75
LSM6-207ENST00000515311 LRRC24Q50LG9 513 aa26■■□□□ 1.75
LSM6-207ENST00000515311 DALRD3Q5D0E6 543 aaKnown RBP26■■□□□ 1.75
LSM6-207ENST00000515311 SP8Q8IXZ3 490 aa26■■□□□ 1.75
LSM6-207ENST00000515311 MROH5Q6ZUA9 1318 aa25.99■■□□□ 1.75
LSM6-207ENST00000515311 IGHDP01880 384 aa25.99■■□□□ 1.75
LSM6-207ENST00000515311 GCC1Q96CN9 775 aa25.99■■□□□ 1.75
LSM6-207ENST00000515311 EXOC6BQ9Y2D4 811 aa25.99■■□□□ 1.75
LSM6-207ENST00000515311 LTBP1Q14766 1721 aa25.99■■□□□ 1.75
LSM6-207ENST00000515311 RAB11FIP3O75154 756 aa25.98■■□□□ 1.75
LSM6-207ENST00000515311 ERC1Q8IUD2 1116 aa25.98■■□□□ 1.75
LSM6-207ENST00000515311 C7orf43Q8WVR3 580 aa25.98■■□□□ 1.75
LSM6-207ENST00000515311 CCDC136Q96JN2 1154 aa25.98■■□□□ 1.75
LSM6-207ENST00000515311 MINPP1Q9UNW1 487 aa25.98■■□□□ 1.75
LSM6-207ENST00000515311 OS9Q13438 667 aaPredicted RBP25.97■■□□□ 1.75
LSM6-207ENST00000515311 CC2D2BQ6DHV5 1058 aa25.97■■□□□ 1.75
LSM6-207ENST00000515311 SMC5Q8IY18 1101 aa25.97■■□□□ 1.75
LSM6-207ENST00000515311 TMX4Q9H1E5 349 aaPredicted RBP25.97■■□□□ 1.75
LSM6-207ENST00000515311 ANKRD2Q9GZV1 360 aa25.96■■□□□ 1.75
LSM6-207ENST00000515311 CHRNDQ07001 517 aa25.95■■□□□ 1.74
LSM6-207ENST00000515311 GRIPAP1Q4V328 841 aa25.95■■□□□ 1.74
LSM6-207ENST00000515311 METTL24Q5JXM2 366 aa25.95■■□□□ 1.74
LSM6-207ENST00000515311 SOGA3Q5TF21 947 aa25.95■■□□□ 1.74
LSM6-207ENST00000515311 SASH1O94885 1247 aa25.94■■□□□ 1.74
LSM6-207ENST00000515311 VGLL2Q8N8G2 317 aa25.94■■□□□ 1.74
LSM6-207ENST00000515311 SNED1Q8TER0 1413 aa25.94■■□□□ 1.74
LSM6-207ENST00000515311 XDHP47989 1333 aa25.93■■□□□ 1.74
LSM6-207ENST00000515311 KDM2BQ8NHM5 1336 aa25.93■■□□□ 1.74
LSM6-207ENST00000515311 KIF1BPQ96EK5 621 aa25.93■■□□□ 1.74
LSM6-207ENST00000515311 PODXL2Q9NZ53 605 aa25.93■■□□□ 1.74
LSM6-207ENST00000515311 CEP126Q9P2H0 1117 aa25.93■■□□□ 1.74
LSM6-207ENST00000515311 BCS1LQ9Y276 419 aa25.93■■□□□ 1.74
LSM6-207ENST00000515311 C21orf2O43822 256 aa25.92■■□□□ 1.74
LSM6-207ENST00000515311 PDE8BO95263 885 aa25.92■■□□□ 1.74
LSM6-207ENST00000515311 CENPQQ7L2Z9 268 aaPredicted RBP25.92■■□□□ 1.74
LSM6-207ENST00000515311 RHPN1Q8TCX5 695 aa25.92■■□□□ 1.74
LSM6-207ENST00000515311 FER1L6Q2WGJ9 1857 aa25.91■■□□□ 1.74
LSM6-207ENST00000515311 DUOX1Q9NRD9 1551 aa25.91■■□□□ 1.74
LSM6-207ENST00000515311 GPSM2P81274 684 aa25.91■■□□□ 1.74
LSM6-207ENST00000515311 TFCP2Q12800 502 aa25.91■■□□□ 1.74
LSM6-207ENST00000515311 CCDC93Q567U6 631 aa25.91■■□□□ 1.74
LSM6-207ENST00000515311 SLC51AQ86UW1 340 aa25.91■■□□□ 1.74
LSM6-207ENST00000515311 LRRCC1Q9C099 1032 aa25.91■■□□□ 1.74
LSM6-207ENST00000515311 OLFM4Q6UX06 510 aa25.9■■□□□ 1.74
LSM6-207ENST00000515311 RTKN2Q8IZC4 609 aa25.9■■□□□ 1.74
LSM6-207ENST00000515311 GPR108Q9NPR9 543 aa25.9■■□□□ 1.74
LSM6-207ENST00000515311 ANKIB1Q9P2G1 1089 aa25.9■■□□□ 1.74
LSM6-207ENST00000515311 GTF3C3Q9Y5Q9 886 aa25.9■■□□□ 1.74
LSM6-207ENST00000515311 ARAP2Q8WZ64 1704 aa25.9■■□□□ 1.74
LSM6-207ENST00000515311 B4GALNT3Q6L9W6 998 aa25.89■■□□□ 1.74
LSM6-207ENST00000515311 MPNDQ8N594 471 aa25.89■■□□□ 1.74
LSM6-207ENST00000515311 HELBQ8NG08 1087 aaPredicted RBP25.89■■□□□ 1.74
LSM6-207ENST00000515311 ZNF219Q9P2Y4 722 aaPredicted RBP25.89■■□□□ 1.74
LSM6-207ENST00000515311 WWC3Q9ULE0 1092 aa25.89■■□□□ 1.74
LSM6-207ENST00000515311 NSFL1CQ9UNZ2 370 aaKnown RBP25.89■■□□□ 1.74
LSM6-207ENST00000515311 LEMD3Q9Y2U8 911 aa25.89■■□□□ 1.74
LSM6-207ENST00000515311 APBB1O00213 710 aa25.88■■□□□ 1.73
LSM6-207ENST00000515311 TAF5LO75529 589 aa25.88■■□□□ 1.73
LSM6-207ENST00000515311 PUM3Q15397 648 aaKnown RBP25.88■■□□□ 1.73
LSM6-207ENST00000515311 DPP8Q6V1X1 898 aaPredicted RBP25.88■■□□□ 1.73
LSM6-207ENST00000515311 AKAP2Q9Y2D5 859 aa25.88■■□□□ 1.73
LSM6-207ENST00000515311 ZNF609O15014 1411 aa25.88■■□□□ 1.73
LSM6-207ENST00000515311 ATP2B4P23634 1241 aa25.87■■□□□ 1.73
LSM6-207ENST00000515311 UBE4AQ14139 1066 aa25.87■■□□□ 1.73
LSM6-207ENST00000515311 RTFDC1Q9BY42 306 aaPredicted RBP25.87■■□□□ 1.73
LSM6-207ENST00000515311 GGA1Q9UJY5 639 aa25.87■■□□□ 1.73
LSM6-207ENST00000515311 GOLGB1Q14789 3259 aaKnown RBP25.87■■□□□ 1.73
LSM6-207ENST00000515311 FGFR2P21802 821 aa25.86■■□□□ 1.73
LSM6-207ENST00000515311 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.86■■□□□ 1.73
LSM6-207ENST00000515311 ZNF804BA4D1E1 1349 aa25.86■■□□□ 1.73
LSM6-207ENST00000515311 KCNJ4P48050 445 aa25.85■■□□□ 1.73
LSM6-207ENST00000515311 NUCB1Q02818 461 aa25.85■■□□□ 1.73
LSM6-207ENST00000515311 ATP2B3Q16720 1220 aa25.85■■□□□ 1.73
LSM6-207ENST00000515311 TNNI3KQ59H18 835 aa25.85■■□□□ 1.73
LSM6-207ENST00000515311 CLASRPQ8N2M8 674 aaKnown RBP25.85■■□□□ 1.73
LSM6-207ENST00000515311 TBC1D16Q8TBP0 767 aa25.85■■□□□ 1.73
LSM6-207ENST00000515311 LPIN2Q92539 896 aa25.85■■□□□ 1.73
LSM6-207ENST00000515311 PSMD1Q99460 953 aa25.85■■□□□ 1.73
LSM6-207ENST00000515311 FPGT-TNNI3KV9GXZ4 949 aa25.85■■□□□ 1.73
LSM6-207ENST00000515311 UFL1O94874 794 aa25.84■■□□□ 1.73
LSM6-207ENST00000515311 ANKRD45Q5TZF3 282 aa25.84■■□□□ 1.73
LSM6-207ENST00000515311 IL1RAPL2Q9NP60 686 aa25.84■■□□□ 1.73
LSM6-207ENST00000515311 ZBTB47Q9UFB7 747 aaPredicted RBP25.84■■□□□ 1.73
LSM6-207ENST00000515311 SUPT20HQ8NEM7 779 aa25.83■■□□□ 1.73
LSM6-207ENST00000515311 POLLQ9UGP5 575 aa25.83■■□□□ 1.73
LSM6-207ENST00000515311 LTBP3Q9NS15 1303 aa25.83■■□□□ 1.73
LSM6-207ENST00000515311 A0A1B0GUL7 405 aa25.82■■□□□ 1.72
LSM6-207ENST00000515311 SLC5A1P13866 664 aa25.82■■□□□ 1.72
LSM6-207ENST00000515311 YBX3P16989 372 aaKnown RBP eCLIP25.82■■□□□ 1.723e-6■□□□□ 8.1
LSM6-207ENST00000515311 FKBP4Q02790 459 aaKnown RBP eCLIP25.82■■□□□ 1.72
LSM6-207ENST00000515311 C15orf52Q6ZUT6 534 aaKnown RBP25.82■■□□□ 1.72
LSM6-207ENST00000515311 CHD1LQ86WJ1 897 aa25.82■■□□□ 1.72
LSM6-207ENST00000515311 MED23Q9ULK4 1368 aa25.82■■□□□ 1.72
LSM6-207ENST00000515311 C6orf229H3BNL8 230 aa25.81■■□□□ 1.72
LSM6-207ENST00000515311 SMARCA5O60264 1052 aaPredicted RBP25.81■■□□□ 1.72
LSM6-207ENST00000515311 IFIT1P09914 478 aaKnown RBP25.81■■□□□ 1.72
LSM6-207ENST00000515311 EAF2Q96CJ1 260 aaPredicted RBP25.81■■□□□ 1.72
LSM6-207ENST00000515311 IRS2Q9Y4H2 1338 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms