RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 CCDC191Q8NCU4 936 aa19.46■□□□□ 0.71
DDR1-278ENST00000515233 ZC3H12CQ9C0D7 883 aaKnown RBP19.46■□□□□ 0.71
DDR1-278ENST00000515233 CHMP4AQ9BY43 222 aa19.45■□□□□ 0.7
DDR1-278ENST00000515233 KCNQ5Q9NR82 932 aa19.45■□□□□ 0.7
DDR1-278ENST00000515233 RTL9Q8NET4 1388 aa19.44■□□□□ 0.7
DDR1-278ENST00000515233 ELL2O00472 640 aaPredicted RBP19.44■□□□□ 0.7
DDR1-278ENST00000515233 PDE8AO60658 829 aa19.44■□□□□ 0.7
DDR1-278ENST00000515233 EGFRP00533 1210 aa19.44■□□□□ 0.7
DDR1-278ENST00000515233 PCCAP05165 728 aaPredicted RBP19.44■□□□□ 0.7
DDR1-278ENST00000515233 VIL1P09327 827 aaKnown RBP19.44■□□□□ 0.7
DDR1-278ENST00000515233 DOK7Q18PE1 504 aa19.44■□□□□ 0.7
DDR1-278ENST00000515233 TBC1D10BQ4KMP7 808 aaPredicted RBP19.44■□□□□ 0.7
DDR1-278ENST00000515233 MYD88Q99836 296 aa19.44■□□□□ 0.7
DDR1-278ENST00000515233 SEC31BQ9NQW1 1179 aa19.44■□□□□ 0.7
DDR1-278ENST00000515233 POLR2AP24928 1970 aaKnown RBP19.44■□□□□ 0.7
DDR1-278ENST00000515233 NOGQ13253 232 aa19.43■□□□□ 0.7
DDR1-278ENST00000515233 CCDC152Q4G0S7 254 aa19.43■□□□□ 0.7
DDR1-278ENST00000515233 DCPSQ96C86 337 aaKnown RBP19.43■□□□□ 0.7
DDR1-278ENST00000515233 HUNKP57058 714 aa19.42■□□□□ 0.7
DDR1-278ENST00000515233 KRT26Q7Z3Y9 468 aa19.42■□□□□ 0.7
DDR1-278ENST00000515233 C8orf58Q8NAV2 365 aa19.42■□□□□ 0.7
DDR1-278ENST00000515233 METTL22Q9BUU2 404 aaPredicted RBP19.42■□□□□ 0.7
DDR1-278ENST00000515233 DDX58O95786 925 aaKnown RBP19.41■□□□□ 0.7
DDR1-278ENST00000515233 RBM26Q5T8P6 1007 aaKnown RBP19.41■□□□□ 0.7
DDR1-278ENST00000515233 CCDC30Q5VVM6 783 aa19.41■□□□□ 0.7
DDR1-278ENST00000515233 DLK2Q6UY11 383 aa19.41■□□□□ 0.7
DDR1-278ENST00000515233 CWC25Q9NXE8 425 aaPredicted RBP19.41■□□□□ 0.7
DDR1-278ENST00000515233 ANKIB1Q9P2G1 1089 aa19.41■□□□□ 0.7
DDR1-278ENST00000515233 TSKSQ9UJT2 592 aa19.41■□□□□ 0.7
DDR1-278ENST00000515233 GGA1Q9UJY5 639 aa19.41■□□□□ 0.7
DDR1-278ENST00000515233 SCN9AQ15858 1988 aa19.41■□□□□ 0.7
DDR1-278ENST00000515233 UFL1O94874 794 aa19.4■□□□□ 0.7
DDR1-278ENST00000515233 C2orf69Q8N8R5 385 aa19.4■□□□□ 0.7
DDR1-278ENST00000515233 G3V3G9 751 aa19.39■□□□□ 0.69
DDR1-278ENST00000515233 KIF4BQ2VIQ3 1234 aa19.39■□□□□ 0.69
DDR1-278ENST00000515233 DCAF8Q5TAQ9 597 aa19.39■□□□□ 0.69
DDR1-278ENST00000515233 RGMBQ6NW40 437 aa19.39■□□□□ 0.69
DDR1-278ENST00000515233 AGBL3Q8NEM8 1001 aa19.39■□□□□ 0.69
DDR1-278ENST00000515233 GBA2Q9HCG7 927 aaPredicted RBP19.39■□□□□ 0.69
DDR1-278ENST00000515233 ZNF609O15014 1411 aa19.39■□□□□ 0.69
DDR1-278ENST00000515233 ANKRD18AQ8IVF6 992 aa19.38■□□□□ 0.69
DDR1-278ENST00000515233 CCDC102AQ96A19 550 aa19.38■□□□□ 0.69
DDR1-278ENST00000515233 ZIC5Q96T25 663 aa19.38■□□□□ 0.69
DDR1-278ENST00000515233 XDHP47989 1333 aa19.37■□□□□ 0.69
DDR1-278ENST00000515233 FAM155AB1AL88 458 aaPredicted RBP19.37■□□□□ 0.69
DDR1-278ENST00000515233 ADM5C9JUS6 153 aa19.37■□□□□ 0.69
DDR1-278ENST00000515233 ZNF280AP59817 542 aaPredicted RBP19.37■□□□□ 0.69
DDR1-278ENST00000515233 KSR2Q6VAB6 950 aa19.37■□□□□ 0.69
DDR1-278ENST00000515233 JARID2Q92833 1246 aaPredicted RBP19.37■□□□□ 0.69
DDR1-278ENST00000515233 MAP3K2Q9Y2U5 619 aa19.37■□□□□ 0.69
DDR1-278ENST00000515233 CASP8AP2Q9UKL3 1982 aa19.36■□□□□ 0.69
DDR1-278ENST00000515233 ATP2B4P23634 1241 aa19.36■□□□□ 0.69
DDR1-278ENST00000515233 RGS19P49795 217 aa19.36■□□□□ 0.69
DDR1-278ENST00000515233 RSBN1LQ6PCB5 846 aaPredicted RBP19.36■□□□□ 0.69
DDR1-278ENST00000515233 PODNQ7Z5L7 613 aa19.36■□□□□ 0.69
DDR1-278ENST00000515233 SULF1Q8IWU6 871 aa19.36■□□□□ 0.69
DDR1-278ENST00000515233 TSPYL6Q8N831 410 aa19.36■□□□□ 0.69
DDR1-278ENST00000515233 PSME4Q14997 1843 aa19.36■□□□□ 0.69
DDR1-278ENST00000515233 CCDC85CA6NKD9 419 aa19.35■□□□□ 0.69
DDR1-278ENST00000515233 IGKV5-2P06315 115 aa19.35■□□□□ 0.69
DDR1-278ENST00000515233 TTLL11Q8NHH1 800 aa19.35■□□□□ 0.69
DDR1-278ENST00000515233 CCDC85AQ96PX6 553 aaPredicted RBP19.35■□□□□ 0.69
DDR1-278ENST00000515233 GMLQ99445 158 aa19.35■□□□□ 0.69
DDR1-278ENST00000515233 GGA3Q9NZ52 723 aa19.35■□□□□ 0.69
DDR1-278ENST00000515233 PI4KAP2A4QPH2 592 aa19.34■□□□□ 0.69
DDR1-278ENST00000515233 PI4KAP1Q8N8J0 262 aa19.34■□□□□ 0.69
DDR1-278ENST00000515233 CDC5LQ99459 802 aaKnown RBP19.34■□□□□ 0.69
DDR1-278ENST00000515233 MCOLN1Q9GZU1 580 aa19.34■□□□□ 0.69
DDR1-278ENST00000515233 ZNF157P51786 506 aaPredicted RBP19.33■□□□□ 0.68
DDR1-278ENST00000515233 CTSWP56202 376 aa19.33■□□□□ 0.68
DDR1-278ENST00000515233 SCARF1Q14162 830 aa19.33■□□□□ 0.68
DDR1-278ENST00000515233 BSDC1Q9NW68 430 aaPredicted RBP19.33■□□□□ 0.68
DDR1-278ENST00000515233 SAGE1Q9NXZ1 904 aa19.33■□□□□ 0.68
DDR1-278ENST00000515233 MINPP1Q9UNW1 487 aa19.33■□□□□ 0.68
DDR1-278ENST00000515233 ASTN2O75129 1339 aaPredicted RBP19.32■□□□□ 0.68
DDR1-278ENST00000515233 USP17L3A6NCW0 530 aa19.32■□□□□ 0.68
DDR1-278ENST00000515233 USP17L4A6NCW7 530 aa19.32■□□□□ 0.68
DDR1-278ENST00000515233 USP17L8P0C7I0 530 aa19.32■□□□□ 0.68
DDR1-278ENST00000515233 KIF23Q02241 960 aaPredicted RBP19.32■□□□□ 0.68
DDR1-278ENST00000515233 NEXNQ0ZGT2 675 aa19.32■□□□□ 0.68
DDR1-278ENST00000515233 CCDC27Q2M243 656 aa19.32■□□□□ 0.68
DDR1-278ENST00000515233 ANGEL2Q5VTE6 544 aaKnown RBP19.32■□□□□ 0.68
DDR1-278ENST00000515233 USP17L1Q7RTZ2 530 aa19.32■□□□□ 0.68
DDR1-278ENST00000515233 CDCA5Q96FF9 252 aa19.32■□□□□ 0.68
DDR1-278ENST00000515233 STK31Q9BXU1 1019 aa19.32■□□□□ 0.68
DDR1-278ENST00000515233 MYOZ2Q9NPC6 264 aa19.32■□□□□ 0.68
DDR1-278ENST00000515233 PITPNM2Q9BZ72 1349 aa19.31■□□□□ 0.68
DDR1-278ENST00000515233 SLC10A3P09131 477 aa19.31■□□□□ 0.68
DDR1-278ENST00000515233 FAM161AQ3B820 660 aa19.31■□□□□ 0.68
DDR1-278ENST00000515233 MYH3P11055 1940 aa19.31■□□□□ 0.68
DDR1-278ENST00000515233 H7C1W4 665 aa19.3■□□□□ 0.68
DDR1-278ENST00000515233 FKBP1BP68106 108 aa19.3■□□□□ 0.68
DDR1-278ENST00000515233 MLLT1Q03111 559 aaPredicted RBP19.3■□□□□ 0.68
DDR1-278ENST00000515233 DGKZQ13574 1117 aa19.3■□□□□ 0.68
DDR1-278ENST00000515233 REM2Q8IYK8 340 aaPredicted RBP19.3■□□□□ 0.68
DDR1-278ENST00000515233 GREM2Q9H772 168 aa19.3■□□□□ 0.68
DDR1-278ENST00000515233 MED23Q9ULK4 1368 aa19.3■□□□□ 0.68
DDR1-278ENST00000515233 WTIPA6NIX2 430 aaPredicted RBP19.29■□□□□ 0.68
DDR1-278ENST00000515233 NEURL1BA8MQ27 555 aa19.29■□□□□ 0.68
DDR1-278ENST00000515233 CCT4P50991 539 aaKnown RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms