RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 NPHP3Q7Z494 1330 aa15.16■□□□□ 0.02
TCOF1-214ENST00000515035 A0A1B0GUL7 405 aa15.16■□□□□ 0.02
TCOF1-214ENST00000515035 METAP2P50579 478 aaKnown RBP eCLIP15.16■□□□□ 0.02
TCOF1-214ENST00000515035 MPRIPQ6WCQ1 1025 aa15.16■□□□□ 0.02
TCOF1-214ENST00000515035 CATIPQ7Z7H3 387 aa15.16■□□□□ 0.02
TCOF1-214ENST00000515035 ARFGAP2Q8N6H7 521 aa15.16■□□□□ 0.02
TCOF1-214ENST00000515035 CEP83Q9Y592 693 aa15.16■□□□□ 0.02
TCOF1-214ENST00000515035 UGGT2Q9NYU1 1516 aa15.16■□□□□ 0.02
TCOF1-214ENST00000515035 DNAJC21Q5F1R6 531 aaKnown RBP15.16■□□□□ 0.02
TCOF1-214ENST00000515035 RRAGBQ5VZM2 374 aa15.16■□□□□ 0.02
TCOF1-214ENST00000515035 PPP1R14CQ8TAE6 165 aa15.16■□□□□ 0.02
TCOF1-214ENST00000515035 IKBKGQ9Y6K9 419 aa15.16■□□□□ 0.02
TCOF1-214ENST00000515035 A0A087WZG4 1122 aa15.16■□□□□ 0.02
TCOF1-214ENST00000515035 ANKRD18BA2A2Z9 1011 aa15.16■□□□□ 0.02
TCOF1-214ENST00000515035 FLIIQ13045 1269 aa15.16■□□□□ 0.02
TCOF1-214ENST00000515035 PUF60Q9UHX1 559 aaKnown RBP15.16■□□□□ 0.02
TCOF1-214ENST00000515035 ADAMTS12P58397 1594 aa15.16■□□□□ 0.02
TCOF1-214ENST00000515035 MPHOSPH10O00566 681 aaKnown RBP15.16■□□□□ 0.02
TCOF1-214ENST00000515035 TMEM67Q5HYA8 995 aa15.16■□□□□ 0.02
TCOF1-214ENST00000515035 PAIP2Q9BPZ3 127 aaKnown RBP15.16■□□□□ 0.02
TCOF1-214ENST00000515035 TEX13AQ9BXU3 409 aaPredicted RBP15.16■□□□□ 0.02
TCOF1-214ENST00000515035 TUBBP07437 444 aa15.15■□□□□ 0.02
TCOF1-214ENST00000515035 RHOXF2BP0C7M4 288 aa15.15■□□□□ 0.02
TCOF1-214ENST00000515035 TNIP1Q15025 636 aa15.15■□□□□ 0.02
TCOF1-214ENST00000515035 RHOXF2Q9BQY4 288 aa15.15■□□□□ 0.02
TCOF1-214ENST00000515035 RMND1Q9NWS8 449 aa15.15■□□□□ 0.02
TCOF1-214ENST00000515035 ITSN2Q9NZM3 1697 aa15.15■□□□□ 0.02
TCOF1-214ENST00000515035 HAND2P61296 217 aa15.15■□□□□ 0.02
TCOF1-214ENST00000515035 MXRA7P84157 204 aa15.15■□□□□ 0.02
TCOF1-214ENST00000515035 KRBA2Q6ZNG9 492 aa15.15■□□□□ 0.02
TCOF1-214ENST00000515035 CPLX4Q7Z7G2 160 aa15.15■□□□□ 0.02
TCOF1-214ENST00000515035 IFNL2Q8IZJ0 200 aa15.15■□□□□ 0.02
TCOF1-214ENST00000515035 CCDC97Q96F63 343 aaPredicted RBP15.15■□□□□ 0.02
TCOF1-214ENST00000515035 SPAG5Q96R06 1193 aa15.15■□□□□ 0.02
TCOF1-214ENST00000515035 TTC21AQ8NDW8 1320 aa15.15■□□□□ 0.02
TCOF1-214ENST00000515035 TCEANC2Q96MN5 208 aa15.15■□□□□ 0.02
TCOF1-214ENST00000515035 SLC26A6Q9BXS9 759 aa15.15■□□□□ 0.02
TCOF1-214ENST00000515035 UBAP1LF5GYI3 381 aa15.15■□□□□ 0.02
TCOF1-214ENST00000515035 PRC1O43663 620 aa15.15■□□□□ 0.02
TCOF1-214ENST00000515035 AFMP43652 599 aa15.14■□□□□ 0.01
TCOF1-214ENST00000515035 KARSQ15046 597 aaKnown RBP15.14■□□□□ 0.01
TCOF1-214ENST00000515035 DAAM2Q86T65 1068 aa15.14■□□□□ 0.01
TCOF1-214ENST00000515035 ERO1AQ96HE7 468 aa15.14■□□□□ 0.01
TCOF1-214ENST00000515035 RSRC1Q96IZ7 334 aaKnown RBP15.14■□□□□ 0.01
TCOF1-214ENST00000515035 CCDC129Q6ZRS4 1044 aa15.14■□□□□ 0.01
TCOF1-214ENST00000515035 SELENOOQ9BVL4 669 aa15.14■□□□□ 0.01
TCOF1-214ENST00000515035 RIMS2Q9UQ26 1411 aa15.14■□□□□ 0.01
TCOF1-214ENST00000515035 KRT86O43790 486 aa15.14■□□□□ 0.01
TCOF1-214ENST00000515035 NAA25Q14CX7 972 aa15.14■□□□□ 0.01
TCOF1-214ENST00000515035 FAM76AQ8TAV0 307 aa15.14■□□□□ 0.01
TCOF1-214ENST00000515035 LZTFL1Q9NQ48 299 aa15.14■□□□□ 0.01
TCOF1-214ENST00000515035 SYCP2Q9BX26 1530 aa15.14■□□□□ 0.01
TCOF1-214ENST00000515035 DDX12PQ92771 950 aa15.14■□□□□ 0.01
TCOF1-214ENST00000515035 KIF5AQ12840 1032 aa15.13■□□□□ 0.01
TCOF1-214ENST00000515035 HDXQ7Z353 690 aa15.13■□□□□ 0.01
TCOF1-214ENST00000515035 ESYT1Q9BSJ8 1104 aa15.13■□□□□ 0.01
TCOF1-214ENST00000515035 PLVAPQ9BX97 442 aa15.13■□□□□ 0.01
TCOF1-214ENST00000515035 TMOD2Q9NZR1 351 aa15.13■□□□□ 0.01
TCOF1-214ENST00000515035 NCOA7Q8NI08 942 aa15.13■□□□□ 0.01
TCOF1-214ENST00000515035 CAPZA3Q96KX2 299 aa15.13■□□□□ 0.01
TCOF1-214ENST00000515035 TTC14Q96N46 770 aa15.13■□□□□ 0.01
TCOF1-214ENST00000515035 STMN4Q9H169 189 aaPredicted RBP15.13■□□□□ 0.01
TCOF1-214ENST00000515035 KRT83P78385 493 aa15.13■□□□□ 0.01
TCOF1-214ENST00000515035 PPP1R42Q7Z4L9 355 aa15.13■□□□□ 0.01
TCOF1-214ENST00000515035 CCDC77Q9BR77 488 aa15.13■□□□□ 0.01
TCOF1-214ENST00000515035 A0A1B0GUA9 196 aa15.13■□□□□ 0.01
TCOF1-214ENST00000515035 EVCP57679 992 aa15.13■□□□□ 0.01
TCOF1-214ENST00000515035 SELENOSQ9BQE4 189 aa15.13■□□□□ 0.01
TCOF1-214ENST00000515035 KIF5BP33176 963 aa15.12■□□□□ 0.01
TCOF1-214ENST00000515035 ZNF569Q5MCW4 686 aa15.12■□□□□ 0.01
TCOF1-214ENST00000515035 EXOC1Q9NV70 894 aa15.12■□□□□ 0.01
TCOF1-214ENST00000515035 KLF18A0A0U1RQI7 1052 aa15.12■□□□□ 0.01
TCOF1-214ENST00000515035 VAV2P52735 878 aa15.12■□□□□ 0.01
TCOF1-214ENST00000515035 ZNF444Q8N0Y2 327 aaPredicted RBP15.12■□□□□ 0.01
TCOF1-214ENST00000515035 IQCGQ9H095 443 aaKnown RBP15.12■□□□□ 0.01
TCOF1-214ENST00000515035 ANKRD36BQ8N2N9 1353 aa15.12■□□□□ 0.01
TCOF1-214ENST00000515035 ACTN2P35609 894 aa15.12■□□□□ 0.01
TCOF1-214ENST00000515035 ZBTB16Q05516 673 aa15.12■□□□□ 0.01
TCOF1-214ENST00000515035 PPP2R3AQ06190 1150 aa15.12■□□□□ 0.01
TCOF1-214ENST00000515035 IFIT5Q13325 482 aaKnown RBP15.12■□□□□ 0.01
TCOF1-214ENST00000515035 IFNKQ9P0W0 207 aa15.12■□□□□ 0.01
TCOF1-214ENST00000515035 KIAA0556O60303 1618 aa15.12■□□□□ 0.01
TCOF1-214ENST00000515035 RASAL2Q9UJF2 1139 aa15.12■□□□□ 0.01
TCOF1-214ENST00000515035 PDE1AP54750 535 aa15.11■□□□□ 0.01
TCOF1-214ENST00000515035 GABPB1Q06547 395 aaPredicted RBP15.11■□□□□ 0.01
TCOF1-214ENST00000515035 CAVIN4Q5BKX8 364 aa15.11■□□□□ 0.01
TCOF1-214ENST00000515035 ANKRD24Q8TF21 1146 aa15.11■□□□□ 0.01
TCOF1-214ENST00000515035 DBF4Q9UBU7 674 aaPredicted RBP15.11■□□□□ 0.01
TCOF1-214ENST00000515035 GUCA1BQ9UMX6 200 aa15.11■□□□□ 0.01
TCOF1-214ENST00000515035 SMC6Q96SB8 1091 aa15.11■□□□□ 0.01
TCOF1-214ENST00000515035 LRRC2Q9BYS8 371 aa15.11■□□□□ 0.01
TCOF1-214ENST00000515035 RTL1A6NKG5 1358 aa15.11■□□□□ 0.01
TCOF1-214ENST00000515035 MARCKSP29966 332 aaPredicted RBP15.11■□□□□ 0.01
TCOF1-214ENST00000515035 ZGPATQ8N5A5 531 aaKnown RBP15.11■□□□□ 0.01
TCOF1-214ENST00000515035 CCDC172P0C7W6 258 aa15.1■□□□□ 0.01
TCOF1-214ENST00000515035 FERP16591 822 aa15.1■□□□□ 0.01
TCOF1-214ENST00000515035 RHPN1Q8TCX5 695 aa15.1■□□□□ 0.01
TCOF1-214ENST00000515035 RBSNQ9H1K0 784 aa15.1■□□□□ 0.01
TCOF1-214ENST00000515035 RBM8AQ9Y5S9 174 aaKnown RBP15.1■□□□□ 0.01
TCOF1-214ENST00000515035 TRAPPC8Q9Y2L5 1435 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms