RNA–Protein interactions for RNA: ENST00000514831.1

SMAD1-214, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-214ENST00000514831 RPS8P62241 208 aaKnown RBP29.68■■■□□ 2.34
SMAD1-214ENST00000514831 ZIC5Q96T25 663 aa29.68■■■□□ 2.34
SMAD1-214ENST00000514831 ZNF609O15014 1411 aa29.68■■■□□ 2.34
SMAD1-214ENST00000514831 MLLT1Q03111 559 aaPredicted RBP29.67■■■□□ 2.34
SMAD1-214ENST00000514831 DOK7Q18PE1 504 aa29.67■■■□□ 2.34
SMAD1-214ENST00000514831 ZBTB38Q8NAP3 1195 aaPredicted RBP29.67■■■□□ 2.34
SMAD1-214ENST00000514831 GBA2Q9HCG7 927 aaPredicted RBP29.67■■■□□ 2.34
SMAD1-214ENST00000514831 KCNQ5Q9NR82 932 aa29.67■■■□□ 2.34
SMAD1-214ENST00000514831 MBIPQ9NS73 344 aa29.67■■■□□ 2.34
SMAD1-214ENST00000514831 PODXL2Q9NZ53 605 aa29.67■■■□□ 2.34
SMAD1-214ENST00000514831 RGMBQ6NW40 437 aa29.66■■■□□ 2.34
SMAD1-214ENST00000514831 DCPSQ96C86 337 aaKnown RBP29.66■■■□□ 2.34
SMAD1-214ENST00000514831 FAM155AB1AL88 458 aaPredicted RBP29.65■■■□□ 2.34
SMAD1-214ENST00000514831 ADM5C9JUS6 153 aa29.65■■■□□ 2.34
SMAD1-214ENST00000514831 GOLGA2Q08379 1002 aa29.65■■■□□ 2.34
SMAD1-214ENST00000514831 KIF4BQ2VIQ3 1234 aa29.65■■■□□ 2.34
SMAD1-214ENST00000514831 ADAMTS8Q9UP79 889 aa29.65■■■□□ 2.34
SMAD1-214ENST00000514831 VIL1P09327 827 aaKnown RBP29.64■■■□□ 2.34
SMAD1-214ENST00000514831 HSP90B1P14625 803 aaKnown RBP29.64■■■□□ 2.34
SMAD1-214ENST00000514831 RIC3Q7Z5B4 369 aa29.64■■■□□ 2.34
SMAD1-214ENST00000514831 C2orf69Q8N8R5 385 aa29.64■■■□□ 2.34
SMAD1-214ENST00000514831 ZC3H12CQ9C0D7 883 aaKnown RBP29.64■■■□□ 2.34
SMAD1-214ENST00000514831 ZNF853P0CG23 659 aa29.63■■■□□ 2.33
SMAD1-214ENST00000514831 RBM26Q5T8P6 1007 aaKnown RBP29.63■■■□□ 2.33
SMAD1-214ENST00000514831 SEC31BQ9NQW1 1179 aa29.62■■■□□ 2.33
SMAD1-214ENST00000514831 SAGE1Q9NXZ1 904 aa29.62■■■□□ 2.33
SMAD1-214ENST00000514831 GGA3Q9NZ52 723 aa29.62■■■□□ 2.33
SMAD1-214ENST00000514831 AKAP11Q9UKA4 1901 aa29.62■■■□□ 2.33
SMAD1-214ENST00000514831 UFL1O94874 794 aa29.61■■■□□ 2.33
SMAD1-214ENST00000514831 DDX10Q13206 875 aaKnown RBP29.61■■■□□ 2.33
SMAD1-214ENST00000514831 DGKZQ13574 1117 aa29.61■■■□□ 2.33
SMAD1-214ENST00000514831 CCDC102AQ96A19 550 aa29.61■■■□□ 2.33
SMAD1-214ENST00000514831 SULF1Q8IWU6 871 aa29.6■■■□□ 2.33
SMAD1-214ENST00000514831 CCDC191Q8NCU4 936 aa29.6■■■□□ 2.33
SMAD1-214ENST00000514831 PHAXQ9H814 394 aaKnown RBP29.6■■■□□ 2.33
SMAD1-214ENST00000514831 ANKIB1Q9P2G1 1089 aa29.6■■■□□ 2.33
SMAD1-214ENST00000514831 GGA1Q9UJY5 639 aa29.6■■■□□ 2.33
SMAD1-214ENST00000514831 SLC34A2O95436 690 aa29.59■■■□□ 2.33
SMAD1-214ENST00000514831 CCDC152Q4G0S7 254 aa29.59■■■□□ 2.33
SMAD1-214ENST00000514831 PCCAP05165 728 aaPredicted RBP29.58■■■□□ 2.33
SMAD1-214ENST00000514831 MYD88Q99836 296 aa29.58■■■□□ 2.33
SMAD1-214ENST00000514831 IFT57Q9NWB7 429 aa29.58■■■□□ 2.33
SMAD1-214ENST00000514831 G3V3G9 751 aa29.57■■■□□ 2.32
SMAD1-214ENST00000514831 PDE8AO60658 829 aa29.57■■■□□ 2.32
SMAD1-214ENST00000514831 ZNF157P51786 506 aaPredicted RBP29.57■■■□□ 2.32
SMAD1-214ENST00000514831 ZNF280AP59817 542 aaPredicted RBP29.57■■■□□ 2.32
SMAD1-214ENST00000514831 DCAF8Q5TAQ9 597 aa29.57■■■□□ 2.32
SMAD1-214ENST00000514831 AGBL3Q8NEM8 1001 aa29.57■■■□□ 2.32
SMAD1-214ENST00000514831 MYH3P11055 1940 aa29.57■■■□□ 2.32
SMAD1-214ENST00000514831 PAPPA2Q9BXP8 1791 aa29.57■■■□□ 2.32
SMAD1-214ENST00000514831 ASTN2O75129 1339 aaPredicted RBP29.56■■■□□ 2.32
SMAD1-214ENST00000514831 SLC10A3P09131 477 aa29.56■■■□□ 2.32
SMAD1-214ENST00000514831 KIF23Q02241 960 aaPredicted RBP29.56■■■□□ 2.32
SMAD1-214ENST00000514831 RSBN1LQ6PCB5 846 aaPredicted RBP29.56■■■□□ 2.32
SMAD1-214ENST00000514831 XDHP47989 1333 aa29.55■■■□□ 2.32
SMAD1-214ENST00000514831 GNAI1P63096 354 aa29.55■■■□□ 2.32
SMAD1-214ENST00000514831 CDCA5Q96FF9 252 aa29.55■■■□□ 2.32
SMAD1-214ENST00000514831 CWC25Q9NXE8 425 aaPredicted RBP29.55■■■□□ 2.32
SMAD1-214ENST00000514831 SPEF2Q9C093 1822 aa29.55■■■□□ 2.32
SMAD1-214ENST00000514831 CALD1Q05682 793 aaKnown RBP29.54■■■□□ 2.32
SMAD1-214ENST00000514831 ZNF646O15015 1829 aaPredicted RBP29.54■■■□□ 2.32
SMAD1-214ENST00000514831 ANGEL2Q5VTE6 544 aaKnown RBP29.52■■■□□ 2.32
SMAD1-214ENST00000514831 ANKRD18AQ8IVF6 992 aa29.52■■■□□ 2.32
SMAD1-214ENST00000514831 GMLQ99445 158 aa29.52■■■□□ 2.32
SMAD1-214ENST00000514831 METTL22Q9BUU2 404 aaPredicted RBP29.52■■■□□ 2.32
SMAD1-214ENST00000514831 RNF186Q9NXI6 227 aa29.52■■■□□ 2.32
SMAD1-214ENST00000514831 PITPNM2Q9BZ72 1349 aa29.51■■■□□ 2.32
SMAD1-214ENST00000514831 ELL2O00472 640 aaPredicted RBP29.51■■■□□ 2.31
SMAD1-214ENST00000514831 DDX58O95786 925 aaKnown RBP29.51■■■□□ 2.31
SMAD1-214ENST00000514831 APAF1O14727 1248 aa29.5■■■□□ 2.31
SMAD1-214ENST00000514831 SCARF1Q14162 830 aa29.5■■■□□ 2.31
SMAD1-214ENST00000514831 CCDC85AQ96PX6 553 aaPredicted RBP29.5■■■□□ 2.31
SMAD1-214ENST00000514831 TRPA1O75762 1119 aa29.49■■■□□ 2.31
SMAD1-214ENST00000514831 ATP2B4P23634 1241 aa29.49■■■□□ 2.31
SMAD1-214ENST00000514831 FKBP1BP68106 108 aa29.49■■■□□ 2.31
SMAD1-214ENST00000514831 PODNQ7Z5L7 613 aa29.49■■■□□ 2.31
SMAD1-214ENST00000514831 RASAL3Q86YV0 1011 aa29.49■■■□□ 2.31
SMAD1-214ENST00000514831 JARID2Q92833 1246 aaPredicted RBP29.49■■■□□ 2.31
SMAD1-214ENST00000514831 MYOZ2Q9NPC6 264 aa29.49■■■□□ 2.31
SMAD1-214ENST00000514831 USP17L8P0C7I0 530 aa29.48■■■□□ 2.31
SMAD1-214ENST00000514831 C8orf58Q8NAV2 365 aa29.48■■■□□ 2.31
SMAD1-214ENST00000514831 CSRNP1Q96S65 589 aa29.48■■■□□ 2.31
SMAD1-214ENST00000514831 CHMP4AQ9BY43 222 aa29.48■■■□□ 2.31
SMAD1-214ENST00000514831 MED23Q9ULK4 1368 aa29.48■■■□□ 2.31
SMAD1-214ENST00000514831 USP17L3A6NCW0 530 aa29.47■■■□□ 2.31
SMAD1-214ENST00000514831 USP17L4A6NCW7 530 aa29.47■■■□□ 2.31
SMAD1-214ENST00000514831 CTSWP56202 376 aa29.47■■■□□ 2.31
SMAD1-214ENST00000514831 CCDC30Q5VVM6 783 aa29.47■■■□□ 2.31
SMAD1-214ENST00000514831 USP17L1Q7RTZ2 530 aa29.47■■■□□ 2.31
SMAD1-214ENST00000514831 REM2Q8IYK8 340 aaPredicted RBP29.47■■■□□ 2.31
SMAD1-214ENST00000514831 CDC5LQ99459 802 aaKnown RBP29.47■■■□□ 2.31
SMAD1-214ENST00000514831 PRKRIP1Q9H875 184 aaPredicted RBP29.47■■■□□ 2.31
SMAD1-214ENST00000514831 MAP3K2Q9Y2U5 619 aa29.45■■■□□ 2.31
SMAD1-214ENST00000514831 IGKV5-2P06315 115 aa29.42■■■□□ 2.3
SMAD1-214ENST00000514831 TTLL11Q8NHH1 800 aa29.42■■■□□ 2.3
SMAD1-214ENST00000514831 BSDC1Q9NW68 430 aaPredicted RBP29.42■■■□□ 2.3
SMAD1-214ENST00000514831 KSR2Q6VAB6 950 aa29.41■■■□□ 2.3
SMAD1-214ENST00000514831 MINPP1Q9UNW1 487 aa29.41■■■□□ 2.3
SMAD1-214ENST00000514831 CTU1Q7Z7A3 348 aaKnown RBP29.4■■■□□ 2.3
SMAD1-214ENST00000514831 GREM2Q9H772 168 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms