RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 COPS6Q7L5N1 327 aa8.92□□□□□ -0.98
CLCN3-209ENST00000513761 KLHDC4Q8TBB5 520 aa8.92□□□□□ -0.98
CLCN3-209ENST00000513761 GOLGA1Q92805 767 aa8.92□□□□□ -0.98
CLCN3-209ENST00000513761 ERVK-7P63135 1459 aa8.92□□□□□ -0.98
CLCN3-209ENST00000513761 N4BP3O15049 544 aa8.92□□□□□ -0.98
CLCN3-209ENST00000513761 UNC5CLQ8IV45 518 aa8.92□□□□□ -0.98
CLCN3-209ENST00000513761 IPO4Q8TEX9 1081 aaKnown RBP8.92□□□□□ -0.98
CLCN3-209ENST00000513761 CARD6Q9BX69 1037 aa8.92□□□□□ -0.98
CLCN3-209ENST00000513761 MTMR6Q9Y217 621 aa8.92□□□□□ -0.98
CLCN3-209ENST00000513761 NR1I2O75469 434 aa8.91□□□□□ -0.98
CLCN3-209ENST00000513761 RHOXF2BP0C7M4 288 aa8.91□□□□□ -0.98
CLCN3-209ENST00000513761 ENOX2Q16206 610 aaKnown RBP8.91□□□□□ -0.98
CLCN3-209ENST00000513761 RHOXF2Q9BQY4 288 aa8.91□□□□□ -0.98
CLCN3-209ENST00000513761 NDUFB9Q9Y6M9 179 aa8.91□□□□□ -0.98
CLCN3-209ENST00000513761 ZNF518AQ6AHZ1 1483 aa8.91□□□□□ -0.98
CLCN3-209ENST00000513761 ALDH1L1O75891 902 aa8.91□□□□□ -0.98
CLCN3-209ENST00000513761 OTUD7BQ6GQQ9 843 aa8.91□□□□□ -0.98
CLCN3-209ENST00000513761 BICC1Q9H694 974 aaKnown RBP8.91□□□□□ -0.98
CLCN3-209ENST00000513761 LUC7LQ9NQ29 371 aaKnown RBP8.91□□□□□ -0.98
CLCN3-209ENST00000513761 ZNF215Q9UL58 517 aaPredicted RBP8.91□□□□□ -0.98
CLCN3-209ENST00000513761 RXRAP19793 462 aa8.91□□□□□ -0.98
CLCN3-209ENST00000513761 DMTNQ08495 405 aa8.91□□□□□ -0.98
CLCN3-209ENST00000513761 RNF187Q5TA31 235 aaPredicted RBP8.91□□□□□ -0.98
CLCN3-209ENST00000513761 KRBA2Q6ZNG9 492 aa8.91□□□□□ -0.98
CLCN3-209ENST00000513761 ANKRD13DQ6ZTN6 518 aa8.91□□□□□ -0.98
CLCN3-209ENST00000513761 DHX32Q7L7V1 743 aaKnown RBP8.91□□□□□ -0.98
CLCN3-209ENST00000513761 TMX4Q9H1E5 349 aaPredicted RBP8.91□□□□□ -0.98
CLCN3-209ENST00000513761 CTAGE15A4D2H0 777 aa8.91□□□□□ -0.98
CLCN3-209ENST00000513761 CTAGE8P0CG41 777 aa8.91□□□□□ -0.98
CLCN3-209ENST00000513761 PTH1RQ03431 593 aa8.91□□□□□ -0.98
CLCN3-209ENST00000513761 CTAGE6Q86UF2 777 aa8.91□□□□□ -0.98
CLCN3-209ENST00000513761 CTAGE4Q8IX94 777 aa8.91□□□□□ -0.98
CLCN3-209ENST00000513761 ABCA5Q8WWZ7 1642 aa8.91□□□□□ -0.98
CLCN3-209ENST00000513761 IFIT5Q13325 482 aaKnown RBP8.91□□□□□ -0.98
CLCN3-209ENST00000513761 TAX1BP1Q86VP1 789 aa8.91□□□□□ -0.98
CLCN3-209ENST00000513761 PROSER2Q86WR7 435 aaPredicted RBP8.91□□□□□ -0.98
CLCN3-209ENST00000513761 JADE2Q9NQC1 790 aa8.91□□□□□ -0.98
CLCN3-209ENST00000513761 SYNMO15061 1565 aa8.91□□□□□ -0.98
CLCN3-209ENST00000513761 PRC1O43663 620 aa8.9□□□□□ -0.98
CLCN3-209ENST00000513761 STX17P56962 302 aa8.9□□□□□ -0.98
CLCN3-209ENST00000513761 LMBR1LQ6UX01 489 aa8.9□□□□□ -0.98
CLCN3-209ENST00000513761 TTC6Q86TZ1 520 aa8.9□□□□□ -0.98
CLCN3-209ENST00000513761 PLCD4Q9BRC7 762 aa8.9□□□□□ -0.98
CLCN3-209ENST00000513761 CCDC196A0A1B0GTZ2 297 aa8.9□□□□□ -0.98
CLCN3-209ENST00000513761 CCDC175P0C221 793 aa8.9□□□□□ -0.98
CLCN3-209ENST00000513761 MCM3P25205 808 aa8.9□□□□□ -0.98
CLCN3-209ENST00000513761 TFCP2Q12800 502 aa8.9□□□□□ -0.98
CLCN3-209ENST00000513761 MYO6Q9UM54 1294 aa8.9□□□□□ -0.98
CLCN3-209ENST00000513761 PHF8Q9UPP1 1060 aa8.9□□□□□ -0.98
CLCN3-209ENST00000513761 MAP3K19Q56UN5 1328 aa8.9□□□□□ -0.98
CLCN3-209ENST00000513761 RANBP6O60518 1105 aaKnown RBP8.9□□□□□ -0.98
CLCN3-209ENST00000513761 RASEFQ8IZ41 740 aa8.9□□□□□ -0.98
CLCN3-209ENST00000513761 GNL3LQ9NVN8 582 aaKnown RBP8.9□□□□□ -0.98
CLCN3-209ENST00000513761 GTF2A1P52655 376 aaPredicted RBP8.9□□□□□ -0.99
CLCN3-209ENST00000513761 FAM107BQ9H098 131 aa8.9□□□□□ -0.99
CLCN3-209ENST00000513761 KDM5DQ9BY66 1539 aa8.9□□□□□ -0.99
CLCN3-209ENST00000513761 YTHDC2Q9H6S0 1430 aaKnown RBP8.9□□□□□ -0.99
CLCN3-209ENST00000513761 ERCC6LQ2NKX8 1250 aa8.9□□□□□ -0.99
CLCN3-209ENST00000513761 ZNF569Q5MCW4 686 aa8.9□□□□□ -0.99
CLCN3-209ENST00000513761 LINS1Q8NG48 757 aa8.9□□□□□ -0.99
CLCN3-209ENST00000513761 PAG1Q9NWQ8 432 aa8.9□□□□□ -0.99
CLCN3-209ENST00000513761 PPP2R3AQ06190 1150 aa8.89□□□□□ -0.99
CLCN3-209ENST00000513761 ZFYVE27Q5T4F4 411 aa8.89□□□□□ -0.99
CLCN3-209ENST00000513761 TPCN1Q9ULQ1 816 aa8.89□□□□□ -0.99
CLCN3-209ENST00000513761 AOX1Q06278 1338 aa8.89□□□□□ -0.99
CLCN3-209ENST00000513761 ZBTB43O43298 467 aa8.89□□□□□ -0.99
CLCN3-209ENST00000513761 ERLIN2O94905 339 aa8.89□□□□□ -0.99
CLCN3-209ENST00000513761 TUBB4AP04350 444 aa8.89□□□□□ -0.99
CLCN3-209ENST00000513761 GIMAP7Q8NHV1 300 aa8.89□□□□□ -0.99
CLCN3-209ENST00000513761 TAF4BQ92750 862 aa8.89□□□□□ -0.99
CLCN3-209ENST00000513761 BAG1Q99933 345 aaPredicted RBP8.89□□□□□ -0.99
CLCN3-209ENST00000513761 BCCIPQ9P287 314 aaKnown RBP eCLIP8.89□□□□□ -0.99
CLCN3-209ENST00000513761 PRDM15P57071 1507 aaPredicted RBP8.89□□□□□ -0.99
CLCN3-209ENST00000513761 RGS12O14924 1447 aa8.89□□□□□ -0.99
CLCN3-209ENST00000513761 EIF4G3O43432 1585 aaKnown RBP8.89□□□□□ -0.99
CLCN3-209ENST00000513761 CTAGE9A4FU28 777 aa8.89□□□□□ -0.99
CLCN3-209ENST00000513761 LRRC59Q96AG4 307 aaKnown RBP8.89□□□□□ -0.99
CLCN3-209ENST00000513761 DRC1Q96MC2 740 aa8.89□□□□□ -0.99
CLCN3-209ENST00000513761 IVLP07476 585 aa8.89□□□□□ -0.99
CLCN3-209ENST00000513761 GPTP24298 496 aa8.89□□□□□ -0.99
CLCN3-209ENST00000513761 PAFAH1B1P43034 410 aa8.89□□□□□ -0.99
CLCN3-209ENST00000513761 MNAT1P51948 309 aa8.89□□□□□ -0.99
CLCN3-209ENST00000513761 FANCCQ00597 558 aa8.89□□□□□ -0.99
CLCN3-209ENST00000513761 MYL5Q02045 173 aa8.89□□□□□ -0.99
CLCN3-209ENST00000513761 FKBP15Q5T1M5 1219 aa8.89□□□□□ -0.99
CLCN3-209ENST00000513761 EDC3Q96F86 508 aaKnown RBP8.89□□□□□ -0.99
CLCN3-209ENST00000513761 DHX58Q96C10 678 aa8.88□□□□□ -0.99
CLCN3-209ENST00000513761 SOGA3Q5TF21 947 aa8.88□□□□□ -0.99
CLCN3-209ENST00000513761 CACNA2D4Q7Z3S7 1137 aa8.88□□□□□ -0.99
CLCN3-209ENST00000513761 KIAA1524Q8TCG1 905 aa8.88□□□□□ -0.99
CLCN3-209ENST00000513761 USP44Q9H0E7 712 aa8.88□□□□□ -0.99
CLCN3-209ENST00000513761 CWC25Q9NXE8 425 aaPredicted RBP8.88□□□□□ -0.99
CLCN3-209ENST00000513761 CEBPAP49715 358 aaPredicted RBP8.88□□□□□ -0.99
CLCN3-209ENST00000513761 MAP3K12Q12852 859 aa8.88□□□□□ -0.99
CLCN3-209ENST00000513761 ADCK5Q3MIX3 580 aa8.88□□□□□ -0.99
CLCN3-209ENST00000513761 TDRD12Q587J7 1177 aaKnown RBP8.88□□□□□ -0.99
CLCN3-209ENST00000513761 CEP112Q8N8E3 955 aa8.88□□□□□ -0.99
CLCN3-209ENST00000513761 CAPZA3Q96KX2 299 aa8.88□□□□□ -0.99
CLCN3-209ENST00000513761 FLT4P35916 1363 aa8.88□□□□□ -0.99
CLCN3-209ENST00000513761 KIF24Q5T7B8 1368 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms