RNA–Protein interactions for RNA: ENST00000513734.1

HMGN1P17-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 17, humanhuman

BASIC

Gene HMGN1P17, Length 295 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P17-201ENST00000513734 NEUROD1Q13562 356 aa9.15□□□□□ -0.94
HMGN1P17-201ENST00000513734 PHLDB3Q6NSJ2 640 aa9.15□□□□□ -0.94
HMGN1P17-201ENST00000513734 WNK3Q9BYP7 1800 aa9.15□□□□□ -0.95
HMGN1P17-201ENST00000513734 MON2Q7Z3U7 1717 aa9.14□□□□□ -0.95
HMGN1P17-201ENST00000513734 POLR3AO14802 1390 aaPredicted RBP9.14□□□□□ -0.95
HMGN1P17-201ENST00000513734 GPRASP1Q5JY77 1395 aa9.14□□□□□ -0.95
HMGN1P17-201ENST00000513734 ATAD2Q6PL18 1390 aa9.14□□□□□ -0.95
HMGN1P17-201ENST00000513734 ACEP12821 1306 aa9.14□□□□□ -0.95
HMGN1P17-201ENST00000513734 CBLBQ13191 982 aa9.14□□□□□ -0.95
HMGN1P17-201ENST00000513734 NBPF8Q3BBV2 869 aa9.14□□□□□ -0.95
HMGN1P17-201ENST00000513734 NGDNQ8NEJ9 315 aaKnown RBP9.14□□□□□ -0.95
HMGN1P17-201ENST00000513734 ITPKCQ96DU7 683 aa9.14□□□□□ -0.95
HMGN1P17-201ENST00000513734 ETNK1Q9HBU6 452 aa9.14□□□□□ -0.95
HMGN1P17-201ENST00000513734 TOR4AQ9NXH8 423 aa9.14□□□□□ -0.95
HMGN1P17-201ENST00000513734 SERTAD1Q9UHV2 236 aa9.14□□□□□ -0.95
HMGN1P17-201ENST00000513734 IVNS1ABPQ9Y6Y0 642 aa9.14□□□□□ -0.95
HMGN1P17-201ENST00000513734 PPIP5K1Q6PFW1 1433 aa9.14□□□□□ -0.95
HMGN1P17-201ENST00000513734 CENPJQ9HC77 1338 aaPredicted RBP9.13□□□□□ -0.95
HMGN1P17-201ENST00000513734 M0R2N6 131 aa9.13□□□□□ -0.95
HMGN1P17-201ENST00000513734 ZIC2O95409 532 aaPredicted RBP9.13□□□□□ -0.95
HMGN1P17-201ENST00000513734 GNRH1P01148 92 aa9.13□□□□□ -0.95
HMGN1P17-201ENST00000513734 INHAP05111 366 aa9.13□□□□□ -0.95
HMGN1P17-201ENST00000513734 WDR4P57081 412 aaKnown RBP9.13□□□□□ -0.95
HMGN1P17-201ENST00000513734 ZFAND3Q9H8U3 227 aa9.13□□□□□ -0.95
HMGN1P17-201ENST00000513734 RAB6BQ9NRW1 208 aa9.13□□□□□ -0.95
HMGN1P17-201ENST00000513734 COL18A1P39060 1754 aa9.13□□□□□ -0.95
HMGN1P17-201ENST00000513734 KIAA0232Q92628 1395 aa9.12□□□□□ -0.95
HMGN1P17-201ENST00000513734 BACH1O14867 736 aa9.12□□□□□ -0.95
HMGN1P17-201ENST00000513734 ADH1AP07327 375 aa9.12□□□□□ -0.95
HMGN1P17-201ENST00000513734 SMPD1P17405 629 aa9.12□□□□□ -0.95
HMGN1P17-201ENST00000513734 CHRNA2Q15822 529 aa9.12□□□□□ -0.95
HMGN1P17-201ENST00000513734 VPS72Q15906 364 aa9.12□□□□□ -0.95
HMGN1P17-201ENST00000513734 TRIM67Q6ZTA4 783 aa9.12□□□□□ -0.95
HMGN1P17-201ENST00000513734 ARHGEF10LQ9HCE6 1279 aa9.12□□□□□ -0.95
HMGN1P17-201ENST00000513734 RGPD1P0DJD0 1748 aa9.11□□□□□ -0.95
HMGN1P17-201ENST00000513734 CAMTA1Q9Y6Y1 1673 aa9.11□□□□□ -0.95
HMGN1P17-201ENST00000513734 OCLNQ16625 522 aa9.11□□□□□ -0.95
HMGN1P17-201ENST00000513734 TNS4Q8IZW8 715 aa9.11□□□□□ -0.95
HMGN1P17-201ENST00000513734 KLF16Q9BXK1 252 aaPredicted RBP9.11□□□□□ -0.95
HMGN1P17-201ENST00000513734 BTG4Q9NY30 223 aa9.11□□□□□ -0.95
HMGN1P17-201ENST00000513734 CCDC9Q9Y3X0 531 aaKnown RBP9.11□□□□□ -0.95
HMGN1P17-201ENST00000513734 LTN1O94822 1766 aa9.11□□□□□ -0.95
HMGN1P17-201ENST00000513734 ROCK2O75116 1388 aaKnown RBP9.11□□□□□ -0.95
HMGN1P17-201ENST00000513734 SBF2Q86WG5 1849 aa9.1□□□□□ -0.95
HMGN1P17-201ENST00000513734 TIMP2P16035 220 aa9.1□□□□□ -0.95
HMGN1P17-201ENST00000513734 ARID4AP29374 1257 aaPredicted RBP9.1□□□□□ -0.95
HMGN1P17-201ENST00000513734 SCNN1AP37088 669 aa9.1□□□□□ -0.95
HMGN1P17-201ENST00000513734 PRR20EP86478 221 aa9.1□□□□□ -0.95
HMGN1P17-201ENST00000513734 PRR20CP86479 221 aa9.1□□□□□ -0.95
HMGN1P17-201ENST00000513734 PRR20DP86480 221 aa9.1□□□□□ -0.95
HMGN1P17-201ENST00000513734 PRR20BP86481 221 aa9.1□□□□□ -0.95
HMGN1P17-201ENST00000513734 PRR20AP86496 221 aa9.1□□□□□ -0.95
HMGN1P17-201ENST00000513734 FAM182BQ5T319 152 aa9.1□□□□□ -0.95
HMGN1P17-201ENST00000513734 GAS2L2Q8NHY3 880 aa9.1□□□□□ -0.95
HMGN1P17-201ENST00000513734 CCER1Q8TC90 406 aaPredicted RBP9.1□□□□□ -0.95
HMGN1P17-201ENST00000513734 AGBL1Q96MI9 1066 aa9.1□□□□□ -0.95
HMGN1P17-201ENST00000513734 CXXC1Q9P0U4 656 aaPredicted RBP9.1□□□□□ -0.95
HMGN1P17-201ENST00000513734 USP6P35125 1406 aa9.09□□□□□ -0.95
HMGN1P17-201ENST00000513734 WEE1P30291 646 aa9.09□□□□□ -0.95
HMGN1P17-201ENST00000513734 ZC3H6P61129 1189 aaKnown RBP9.09□□□□□ -0.95
HMGN1P17-201ENST00000513734 Q6ZVU0 165 aa9.09□□□□□ -0.95
HMGN1P17-201ENST00000513734 KDF1Q8NAX2 398 aaPredicted RBP9.09□□□□□ -0.95
HMGN1P17-201ENST00000513734 HPS1Q92902 700 aa9.09□□□□□ -0.95
HMGN1P17-201ENST00000513734 PRDM11Q9NQV5 511 aa9.09□□□□□ -0.95
HMGN1P17-201ENST00000513734 GNEQ9Y223 722 aaKnown RBP9.09□□□□□ -0.95
HMGN1P17-201ENST00000513734 SLIT3O75094 1523 aa9.09□□□□□ -0.95
HMGN1P17-201ENST00000513734 PARP4Q9UKK3 1724 aaKnown RBP9.08□□□□□ -0.96
HMGN1P17-201ENST00000513734 USP19O94966 1318 aa9.08□□□□□ -0.96
HMGN1P17-201ENST00000513734 SPATA31A5Q5VU36 1347 aa9.08□□□□□ -0.96
HMGN1P17-201ENST00000513734 SPATA31A7Q8IWB4 1347 aa9.08□□□□□ -0.96
HMGN1P17-201ENST00000513734 SSH2Q76I76 1423 aa9.08□□□□□ -0.96
HMGN1P17-201ENST00000513734 USP54Q70EL1 1684 aa9.08□□□□□ -0.96
HMGN1P17-201ENST00000513734 A0A1W2PRU2 124 aa9.08□□□□□ -0.96
HMGN1P17-201ENST00000513734 IL2RAP01589 272 aa9.08□□□□□ -0.96
HMGN1P17-201ENST00000513734 RELBQ01201 579 aa9.08□□□□□ -0.96
HMGN1P17-201ENST00000513734 DEFB132Q7Z7B7 95 aa9.08□□□□□ -0.96
HMGN1P17-201ENST00000513734 XAGE2Q96GT9 111 aa9.08□□□□□ -0.96
HMGN1P17-201ENST00000513734 SLC4A9Q96Q91 983 aa9.08□□□□□ -0.96
HMGN1P17-201ENST00000513734 LRRC37A3O60309 1634 aa9.07□□□□□ -0.96
HMGN1P17-201ENST00000513734 PTGIRP43119 386 aa9.07□□□□□ -0.96
HMGN1P17-201ENST00000513734 SMTNP53814 917 aa9.07□□□□□ -0.96
HMGN1P17-201ENST00000513734 SCG3Q8WXD2 468 aaKnown RBP9.07□□□□□ -0.96
HMGN1P17-201ENST00000513734 CNKSR1Q969H4 720 aa9.07□□□□□ -0.96
HMGN1P17-201ENST00000513734 CABP1Q9NZU7 370 aa9.07□□□□□ -0.96
HMGN1P17-201ENST00000513734 RGPD2P0DJD1 1756 aa9.07□□□□□ -0.96
HMGN1P17-201ENST00000513734 BLMP54132 1417 aaPredicted RBP9.06□□□□□ -0.96
HMGN1P17-201ENST00000513734 MEN1O00255 615 aa9.06□□□□□ -0.96
HMGN1P17-201ENST00000513734 EPHA4P54764 986 aa9.06□□□□□ -0.96
HMGN1P17-201ENST00000513734 TMCO4Q5TGY1 634 aa9.06□□□□□ -0.96
HMGN1P17-201ENST00000513734 TAS1R3Q7RTX0 852 aa9.06□□□□□ -0.96
HMGN1P17-201ENST00000513734 ABTB2Q8N961 1025 aa9.06□□□□□ -0.96
HMGN1P17-201ENST00000513734 C1orf216Q8TAB5 229 aa9.06□□□□□ -0.96
HMGN1P17-201ENST00000513734 PURBQ96QR8 312 aaKnown RBP9.06□□□□□ -0.96
HMGN1P17-201ENST00000513734 ESYT1Q9BSJ8 1104 aa9.06□□□□□ -0.96
HMGN1P17-201ENST00000513734 MKNK1Q9BUB5 465 aa9.06□□□□□ -0.96
HMGN1P17-201ENST00000513734 TSPAN10Q9H1Z9 355 aaPredicted RBP9.06□□□□□ -0.96
HMGN1P17-201ENST00000513734 ZNF395Q9H8N7 513 aaPredicted RBP9.06□□□□□ -0.96
HMGN1P17-201ENST00000513734 STRN4Q9NRL3 753 aa9.06□□□□□ -0.96
HMGN1P17-201ENST00000513734 PDZRN3Q9UPQ7 1066 aa9.06□□□□□ -0.96
HMGN1P17-201ENST00000513734 CD163L1Q9NR16 1453 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms