RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 CCDC88AQ3V6T2 1871 aa20.53■□□□□ 0.88
HMGCL-209ENST00000513148 SNED1Q8TER0 1413 aa20.52■□□□□ 0.88
HMGCL-209ENST00000513148 SRGAP3O43295 1099 aa20.52■□□□□ 0.88
HMGCL-209ENST00000513148 CC2D2BQ6DHV5 1058 aa20.52■□□□□ 0.88
HMGCL-209ENST00000513148 DPP8Q6V1X1 898 aaPredicted RBP20.52■□□□□ 0.88
HMGCL-209ENST00000513148 GPSM2P81274 684 aa20.51■□□□□ 0.87
HMGCL-209ENST00000513148 LDHAL6AQ6ZMR3 332 aa20.51■□□□□ 0.87
HMGCL-209ENST00000513148 MPNDQ8N594 471 aa20.51■□□□□ 0.87
HMGCL-209ENST00000513148 UBE2Q2Q8WVN8 375 aa20.51■□□□□ 0.87
HMGCL-209ENST00000513148 CRBNQ96SW2 442 aa20.51■□□□□ 0.87
HMGCL-209ENST00000513148 CNNM1Q9NRU3 951 aa20.51■□□□□ 0.87
HMGCL-209ENST00000513148 ANKIB1Q9P2G1 1089 aa20.51■□□□□ 0.87
HMGCL-209ENST00000513148 SBF1O95248 1867 aa20.51■□□□□ 0.87
HMGCL-209ENST00000513148 ANP32AP39687 249 aaKnown RBP20.51■□□□□ 0.87
HMGCL-209ENST00000513148 ZBTB40Q9NUA8 1239 aa20.51■□□□□ 0.87
HMGCL-209ENST00000513148 PNMA6EA0A0J9YXQ4 647 aa20.5■□□□□ 0.87
HMGCL-209ENST00000513148 RFX5P48382 616 aaPredicted RBP20.5■□□□□ 0.87
HMGCL-209ENST00000513148 FKBP4Q02790 459 aaKnown RBP eCLIP20.5■□□□□ 0.87
HMGCL-209ENST00000513148 PUS3Q9BZE2 481 aaKnown RBP20.5■□□□□ 0.87
HMGCL-209ENST00000513148 ZNF277Q9NRM2 450 aaPredicted RBP20.5■□□□□ 0.87
HMGCL-209ENST00000513148 MINPP1Q9UNW1 487 aa20.5■□□□□ 0.87
HMGCL-209ENST00000513148 DUOX1Q9NRD9 1551 aa20.5■□□□□ 0.87
HMGCL-209ENST00000513148 LTBP1Q14766 1721 aa20.5■□□□□ 0.87
HMGCL-209ENST00000513148 CHD4Q14839 1912 aa20.5■□□□□ 0.87
HMGCL-209ENST00000513148 A0A1B0GUL6 1792 aa20.5■□□□□ 0.87
HMGCL-209ENST00000513148 SIL1Q9H173 461 aa20.49■□□□□ 0.87
HMGCL-209ENST00000513148 CHMP4BQ9H444 224 aaKnown RBP20.49■□□□□ 0.87
HMGCL-209ENST00000513148 PA2G4Q9UQ80 394 aaKnown RBP20.49■□□□□ 0.87
HMGCL-209ENST00000513148 PRELPP51888 382 aa20.49■□□□□ 0.87
HMGCL-209ENST00000513148 IRX6P78412 446 aaPredicted RBP20.49■□□□□ 0.87
HMGCL-209ENST00000513148 MTX1Q13505 466 aa20.49■□□□□ 0.87
HMGCL-209ENST00000513148 PTPN12Q05209 780 aaKnown RBP20.48■□□□□ 0.87
HMGCL-209ENST00000513148 LRRC24Q50LG9 513 aa20.48■□□□□ 0.87
HMGCL-209ENST00000513148 HELBQ8NG08 1087 aaPredicted RBP20.48■□□□□ 0.87
HMGCL-209ENST00000513148 CHRNDQ07001 517 aa20.48■□□□□ 0.87
HMGCL-209ENST00000513148 PSMD1Q99460 953 aa20.48■□□□□ 0.87
HMGCL-209ENST00000513148 LTBP3Q9NS15 1303 aa20.47■□□□□ 0.87
HMGCL-209ENST00000513148 C6orf229H3BNL8 230 aa20.47■□□□□ 0.87
HMGCL-209ENST00000513148 GRIPAP1Q4V328 841 aa20.47■□□□□ 0.87
HMGCL-209ENST00000513148 CEP85Q6P2H3 762 aa20.47■□□□□ 0.87
HMGCL-209ENST00000513148 GPR101Q96P66 508 aaPredicted RBP20.47■□□□□ 0.87
HMGCL-209ENST00000513148 RNF181Q9P0P0 153 aa20.47■□□□□ 0.87
HMGCL-209ENST00000513148 XDHP47989 1333 aa20.47■□□□□ 0.87
HMGCL-209ENST00000513148 TAF5LO75529 589 aa20.46■□□□□ 0.87
HMGCL-209ENST00000513148 UFL1O94874 794 aa20.46■□□□□ 0.87
HMGCL-209ENST00000513148 LMNB1P20700 586 aa20.46■□□□□ 0.87
HMGCL-209ENST00000513148 C9orf131Q5VYM1 1079 aa20.46■□□□□ 0.87
HMGCL-209ENST00000513148 POLLQ9UGP5 575 aa20.46■□□□□ 0.87
HMGCL-209ENST00000513148 TIAM2Q8IVF5 1701 aa20.46■□□□□ 0.87
HMGCL-209ENST00000513148 WTIPA6NIX2 430 aaPredicted RBP20.46■□□□□ 0.87
HMGCL-209ENST00000513148 NBR1Q14596 966 aa20.46■□□□□ 0.87
HMGCL-209ENST00000513148 ZBTB47Q9UFB7 747 aaPredicted RBP20.46■□□□□ 0.87
HMGCL-209ENST00000513148 GGA1Q9UJY5 639 aa20.46■□□□□ 0.87
HMGCL-209ENST00000513148 ATP8B2P98198 1209 aa20.45■□□□□ 0.86
HMGCL-209ENST00000513148 TBC1D16Q8TBP0 767 aa20.45■□□□□ 0.86
HMGCL-209ENST00000513148 AOC3Q16853 763 aa20.44■□□□□ 0.86
HMGCL-209ENST00000513148 RTFDC1Q9BY42 306 aaPredicted RBP20.44■□□□□ 0.86
HMGCL-209ENST00000513148 PODXL2Q9NZ53 605 aa20.44■□□□□ 0.86
HMGCL-209ENST00000513148 SNAP23O00161 211 aa20.44■□□□□ 0.86
HMGCL-209ENST00000513148 EYA2O00167 538 aa20.44■□□□□ 0.86
HMGCL-209ENST00000513148 PPIP5K2O43314 1243 aa20.44■□□□□ 0.86
HMGCL-209ENST00000513148 IARSP41252 1262 aaKnown RBP20.44■□□□□ 0.86
HMGCL-209ENST00000513148 METTL24Q5JXM2 366 aa20.44■□□□□ 0.86
HMGCL-209ENST00000513148 SUPT20HQ8NEM7 779 aa20.44■□□□□ 0.86
HMGCL-209ENST00000513148 ANKRD2Q9GZV1 360 aa20.44■□□□□ 0.86
HMGCL-209ENST00000513148 RIPOR2Q9Y4F9 1068 aa20.44■□□□□ 0.86
HMGCL-209ENST00000513148 DICER1Q9UPY3 1922 aaKnown RBP20.43■□□□□ 0.86
HMGCL-209ENST00000513148 RIMBP2O15034 1052 aa20.43■□□□□ 0.86
HMGCL-209ENST00000513148 KCNJ4P48050 445 aa20.43■□□□□ 0.86
HMGCL-209ENST00000513148 COPRSQ9NQ92 184 aa20.43■□□□□ 0.86
HMGCL-209ENST00000513148 POLA2Q14181 598 aa20.43■□□□□ 0.86
HMGCL-209ENST00000513148 SSH3Q8TE77 659 aa20.43■□□□□ 0.86
HMGCL-209ENST00000513148 COL4A5P29400 1685 aa20.42■□□□□ 0.86
HMGCL-209ENST00000513148 WASHC4Q2M389 1173 aa20.42■□□□□ 0.86
HMGCL-209ENST00000513148 LARGE2Q8N3Y3 721 aa20.42■□□□□ 0.86
HMGCL-209ENST00000513148 EXOC6Q8TAG9 804 aa20.42■□□□□ 0.86
HMGCL-209ENST00000513148 MROH5Q6ZUA9 1318 aa20.42■□□□□ 0.86
HMGCL-209ENST00000513148 ATP2B4P23634 1241 aa20.41■□□□□ 0.86
HMGCL-209ENST00000513148 ATG9AQ7Z3C6 839 aa20.41■□□□□ 0.86
HMGCL-209ENST00000513148 B4GALNT3Q6L9W6 998 aa20.41■□□□□ 0.86
HMGCL-209ENST00000513148 ZNF804BA4D1E1 1349 aa20.41■□□□□ 0.86
HMGCL-209ENST00000513148 SIRT2Q8IXJ6 389 aa20.4■□□□□ 0.86
HMGCL-209ENST00000513148 RPAP2Q8IXW5 612 aaPredicted RBP20.4■□□□□ 0.86
HMGCL-209ENST00000513148 EYA3Q99504 573 aa20.4■□□□□ 0.86
HMGCL-209ENST00000513148 CIAO1O76071 339 aa20.39■□□□□ 0.86
HMGCL-209ENST00000513148 KLRK1P26718 216 aa20.39■□□□□ 0.86
HMGCL-209ENST00000513148 KIAA2012Q0VF49 1180 aa20.39■□□□□ 0.86
HMGCL-209ENST00000513148 LEMD3Q9Y2U8 911 aa20.39■□□□□ 0.86
HMGCL-209ENST00000513148 SURF6O75683 361 aaKnown RBP20.39■□□□□ 0.85
HMGCL-209ENST00000513148 OS9Q13438 667 aaPredicted RBP20.39■□□□□ 0.85
HMGCL-209ENST00000513148 JDP2Q8WYK2 163 aa20.39■□□□□ 0.85
HMGCL-209ENST00000513148 ZC3H12CQ9C0D7 883 aaKnown RBP20.39■□□□□ 0.85
HMGCL-209ENST00000513148 IL15P40933 162 aaPredicted RBP20.38■□□□□ 0.85
HMGCL-209ENST00000513148 VGLL2Q8N8G2 317 aa20.38■□□□□ 0.85
HMGCL-209ENST00000513148 FBXO3Q9UK99 471 aa20.38■□□□□ 0.85
HMGCL-209ENST00000513148 HMMRO75330 724 aa20.37■□□□□ 0.85
HMGCL-209ENST00000513148 PDE8BO95263 885 aa20.37■□□□□ 0.85
HMGCL-209ENST00000513148 G3BP1Q13283 466 aaKnown RBP eCLIP20.37■□□□□ 0.85
HMGCL-209ENST00000513148 DOK7Q18PE1 504 aa20.37■□□□□ 0.85
HMGCL-209ENST00000513148 NIM1KQ8IY84 436 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms